##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062119_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1003522 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.219169086477425 32.0 32.0 32.0 32.0 32.0 2 31.30446866137464 32.0 32.0 32.0 32.0 32.0 3 31.4783203557072 32.0 32.0 32.0 32.0 32.0 4 31.57901471019071 32.0 32.0 32.0 32.0 32.0 5 31.52861222773392 32.0 32.0 32.0 32.0 32.0 6 35.14298141944073 36.0 36.0 36.0 36.0 36.0 7 35.150699237286275 36.0 36.0 36.0 36.0 36.0 8 35.09608857603521 36.0 36.0 36.0 36.0 36.0 9 35.207630724588 36.0 36.0 36.0 36.0 36.0 10 35.05386827593217 36.0 36.0 36.0 36.0 36.0 11 35.213927547178834 36.0 36.0 36.0 36.0 36.0 12 35.11144150302634 36.0 36.0 36.0 36.0 36.0 13 35.16548017881023 36.0 36.0 36.0 36.0 36.0 14 35.12734050673528 36.0 36.0 36.0 36.0 36.0 15 35.099812460514066 36.0 36.0 36.0 36.0 36.0 16 35.10386319383132 36.0 36.0 36.0 36.0 36.0 17 35.08354575186194 36.0 36.0 36.0 36.0 36.0 18 35.08162152897495 36.0 36.0 36.0 36.0 36.0 19 35.07758375003239 36.0 36.0 36.0 36.0 36.0 20 35.079109376775 36.0 36.0 36.0 36.0 36.0 21 35.066354300154856 36.0 36.0 36.0 36.0 36.0 22 35.04850317182882 36.0 36.0 36.0 36.0 36.0 23 35.01704895358547 36.0 36.0 36.0 36.0 36.0 24 34.994162559465565 36.0 36.0 36.0 36.0 36.0 25 34.98163169317663 36.0 36.0 36.0 36.0 36.0 26 34.92803645560336 36.0 36.0 36.0 32.0 36.0 27 34.917165742255776 36.0 36.0 36.0 32.0 36.0 28 34.89167153286126 36.0 36.0 36.0 32.0 36.0 29 34.86602386395116 36.0 36.0 36.0 32.0 36.0 30 34.85515713656502 36.0 36.0 36.0 32.0 36.0 31 34.8509011262334 36.0 36.0 36.0 32.0 36.0 32 34.823274427466465 36.0 36.0 36.0 32.0 36.0 33 34.79866111555103 36.0 36.0 36.0 32.0 36.0 34 34.79355609543189 36.0 36.0 36.0 32.0 36.0 35 34.78341182355743 36.0 36.0 36.0 32.0 36.0 36 34.75232531025728 36.0 36.0 36.0 32.0 36.0 37 34.732957523601875 36.0 36.0 36.0 32.0 36.0 38 34.712638088651765 36.0 36.0 36.0 32.0 36.0 39 34.69183635236696 36.0 36.0 36.0 32.0 36.0 40 34.6868977461381 36.0 36.0 36.0 32.0 36.0 41 34.65194086427602 36.0 36.0 36.0 32.0 36.0 42 34.61077086501342 36.0 36.0 36.0 32.0 36.0 43 34.6243390777681 36.0 36.0 36.0 32.0 36.0 44 34.56959090084722 36.0 36.0 36.0 32.0 36.0 45 34.560405252699994 36.0 36.0 36.0 32.0 36.0 46 34.529689433814106 36.0 36.0 36.0 32.0 36.0 47 34.498001040335936 36.0 36.0 36.0 32.0 36.0 48 34.47794069287968 36.0 36.0 36.0 32.0 36.0 49 34.45845033790988 36.0 36.0 36.0 32.0 36.0 50 34.02228650692262 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 1.0 20 8.0 21 18.0 22 57.0 23 179.0 24 506.0 25 1162.0 26 2408.0 27 4944.0 28 8461.0 29 13952.0 30 20968.0 31 31931.0 32 48885.0 33 83944.0 34 188302.0 35 597795.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.30297871322459 18.159744510850715 12.454198945030761 26.08307783089393 2 15.93075655173926 20.01985103749574 37.179338976396 26.870053434369 3 18.373226243622447 23.394252232142858 28.63869180484694 29.593829719387756 4 12.524189803512032 16.157692606639415 35.38228359717077 35.93583399267779 5 14.670032146779043 36.661876869665036 33.178744462004815 15.489346521551099 6 34.91333523330829 35.221350403877544 16.352107876060515 13.513206486753655 7 30.635800709899737 30.20352319132017 20.116948108760944 19.043727990019153 8 27.999386161937657 33.67150894549397 18.88070216696794 19.448402725600435 9 27.057204525660623 14.359027505126942 18.65170868202192 39.93205928719051 10 16.521726999235693 26.906960591756423 30.921326011114864 25.64998639789302 11 37.231171812875054 21.195250328343572 21.995731035293694 19.577846823487675 12 24.293637807641485 23.80446068945175 28.650991208962033 23.250910293944727 13 29.45944383879975 19.54217246856571 25.041204876425233 25.957178816209307 14 23.425096809038568 19.64112396140792 25.065917837376762 31.867861392176756 15 25.08684413495668 27.3433965573251 21.94241880098294 25.62734050673528 16 25.585865682127324 25.962143067119076 23.692620439156364 24.759370811597236 17 23.943172147695815 26.33783813409173 25.093420971338944 24.625568746873512 18 24.65690768494898 25.351064253826532 26.142677774234695 23.849350286989797 19 25.659925741538302 25.10617604795909 25.16187985913612 24.072018351366488 20 25.725620091657277 24.60964942437677 24.95353859062242 24.711191893343535 21 26.385071777200697 24.523627782948456 24.588300007374027 24.503000432476817 22 25.796145973879998 24.61430840579479 24.985002820067724 24.60454280025749 23 24.470240283960177 24.567597489240384 25.450189881427494 25.511972345371948 24 24.797087830451623 24.97077765808714 25.437637579184326 24.79449693227691 25 24.886200573979593 24.625418526785715 25.413643973214285 25.074736926020407 26 24.49978326183465 25.56852662889942 25.61566095175458 24.31602915751135 27 25.024339349827958 24.929772131867956 25.121397801137796 24.924490717166293 28 24.70495970630997 24.8348043411755 25.536443691972256 24.923792260542278 29 24.68799700253907 24.98246166478661 25.33601855874744 24.993522773926873 30 24.643525867730133 25.029471584211006 25.61910256908508 24.707899978973778 31 25.067612140489757 24.844796007645105 24.975835012426284 25.111756839438854 32 24.864775449519488 25.06028802729603 24.797711247254654 25.277225275929833 33 24.547293526785715 24.77927694515306 25.444036989795922 25.229392538265305 34 25.079047464352655 24.8646003880376 25.620645912202257 24.435706235407483 35 25.421914859693878 24.710020727040817 25.51369180484694 24.354372608418366 36 24.390321677373965 25.23434985416349 25.325329514778467 25.049998953684078 37 25.326980893852408 24.978400576383237 25.046960684564706 24.647657845199646 38 24.803741223411148 24.846789607004133 25.39206913251528 24.95740003706944 39 25.38679081706882 24.760292332742743 24.849379281205845 25.003537568982598 40 25.612916919526345 24.78742348192016 25.23016459047693 24.369495008076562 41 24.536303964173857 25.17386421501266 25.738281417380744 24.55155040343274 42 25.6081652746622 25.340294518315964 25.025287278431126 24.02625292859072 43 24.96088588244439 24.69062476955058 25.363287937704413 24.98520141030062 44 24.603131894742507 25.258450076832467 25.099304222696574 25.03911380572845 45 24.702190546231467 25.30408751821137 25.13099231285887 24.862729622698293 46 24.698703933640125 25.037618410799023 25.061235797181457 25.202441858379387 47 24.963478337123348 24.858547065611443 25.3963572007964 24.781617396468807 48 25.42815914984026 25.42227962235496 24.456641972651227 24.692919255153555 49 24.794142823972805 25.487724305347253 24.754780081854573 24.963352788825365 50 25.10296390558312 25.543319578239114 24.59813434285959 24.75558217331817 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 131.0 1 78.0 2 25.0 3 82.5 4 140.0 5 140.0 6 140.0 7 108.0 8 76.0 9 113.0 10 150.0 11 288.5 12 427.0 13 769.5 14 1112.0 15 1458.5 16 1805.0 17 1840.0 18 1875.0 19 1936.0 20 1997.0 21 2326.0 22 2655.0 23 3357.5 24 4060.0 25 5180.5 26 6301.0 27 8135.5 28 9970.0 29 11575.5 30 13181.0 31 14871.0 32 16561.0 33 19503.5 34 22446.0 35 25816.0 36 29186.0 37 34059.5 38 38933.0 39 41883.0 40 44833.0 41 48380.0 42 51927.0 43 53720.5 44 55514.0 45 59964.5 46 64415.0 47 68224.0 48 72033.0 49 74788.0 50 77543.0 51 75992.5 52 74442.0 53 73995.5 54 73549.0 55 73718.5 56 73888.0 57 71100.5 58 68313.0 59 62400.0 60 56487.0 61 49704.0 62 42921.0 63 36918.5 64 30916.0 65 26170.0 66 21424.0 67 18121.0 68 14818.0 69 13040.0 70 11262.0 71 8781.0 72 6300.0 73 5499.5 74 4699.0 75 3496.0 76 2293.0 77 2074.0 78 1855.0 79 1545.0 80 1235.0 81 980.5 82 726.0 83 603.0 84 480.0 85 381.0 86 282.0 87 192.0 88 102.0 89 67.5 90 33.0 91 27.0 92 21.0 93 15.5 94 10.0 95 13.0 96 16.0 97 13.0 98 10.0 99 7.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.026905239745615938 2 0.0047831537325539455 3 1.992980721897477E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 9.964903609487386E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.97543252664117E-4 17 0.0 18 1.992980721897477E-4 19 0.0 20 9.964903609487386E-5 21 0.0 22 0.0 23 9.964903609487386E-5 24 8.968413248538646E-4 25 1.992980721897477E-4 26 6.97543252664117E-4 27 2.989471082846216E-4 28 0.0014947355414231078 29 5.978942165692432E-4 30 0.00129543746923336 31 3.985961443794954E-4 32 5.978942165692432E-4 33 1.992980721897477E-4 34 0.0010961393970436125 35 1.992980721897477E-4 36 9.964903609487386E-5 37 0.0022919278301820984 38 0.0 39 7.971922887589908E-4 40 9.964903609487386E-5 41 8.968413248538646E-4 42 0.005281398913028314 43 0.0047831537325539455 44 0.0039859614437949544 45 0.002790173010656468 46 0.0023915768662769728 47 7.971922887589908E-4 48 0.0039859614437949544 49 0.003487716263320585 50 0.0014947355414231078 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1003522.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.37707362641099 #Duplication Level Percentage of deduplicated Percentage of total 1 78.24345644038053 47.24110930285737 2 13.500018231822775 16.301831894813088 3 3.8701569209186304 7.010062480802046 4 1.5933092796108088 3.847974067388226 5 0.7980722414528465 2.409263324069668 6 0.4795213526594878 1.737125760897485 7 0.308227564471855 1.302691484766457 8 0.21829863216568912 1.0544186069450097 9 0.14146204529249853 0.7686957891571083 >10 0.7302768822497234 7.890124170219942 >50 0.061841085392394114 2.631019676476652 >100 0.05121566227034948 6.068718851293875 >500 0.003977914859826634 1.626584228319948 >1k 1.6574645249277644E-4 0.11038036199316492 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1103 0.10991288681264585 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.964903609487386E-5 2 0.0 0.0 0.0 0.0 9.964903609487386E-5 3 0.0 0.0 0.0 0.0 9.964903609487386E-5 4 0.0 0.0 0.0 0.0 9.964903609487386E-5 5 0.0 0.0 0.0 0.0 9.964903609487386E-5 6 0.0 0.0 0.0 0.0 9.964903609487386E-5 7 0.0 0.0 0.0 0.0 9.964903609487386E-5 8 0.0 0.0 0.0 0.0 9.964903609487386E-5 9 0.0 0.0 0.0 0.0 9.964903609487386E-5 10 0.0 0.0 0.0 0.0 2.9894710828462154E-4 11 0.0 0.0 0.0 0.0 2.9894710828462154E-4 12 0.0 0.0 0.0 0.0 7.971922887589908E-4 13 0.0 0.0 0.0 0.0 9.964903609487386E-4 14 0.0 0.0 0.0 0.0 9.964903609487386E-4 15 0.0 0.0 0.0 0.0 0.0011957884331384862 16 0.0 0.0 0.0 0.0 0.0011957884331384862 17 0.0 0.0 0.0 0.0 0.0011957884331384862 18 0.0 0.0 0.0 0.0 0.0011957884331384862 19 0.0 0.0 0.0 0.0 0.0011957884331384862 20 0.0 0.0 0.0 0.0 0.00129543746923336 21 0.0 0.0 0.0 0.0 0.0014947355414231078 22 0.0 0.0 0.0 9.964903609487386E-5 0.0014947355414231078 23 0.0 0.0 0.0 1.992980721897477E-4 0.0014947355414231078 24 0.0 0.0 0.0 1.992980721897477E-4 0.0014947355414231078 25 0.0 0.0 0.0 3.985961443794954E-4 0.0014947355414231078 26 0.0 0.0 0.0 4.982451804743693E-4 0.0015943845775179817 27 0.0 0.0 0.0 6.97543252664117E-4 0.0015943845775179817 28 0.0 0.0 0.0 0.00129543746923336 0.0015943845775179817 29 0.0 0.0 0.0 0.0018933316858026031 0.0015943845775179817 30 0.0 0.0 0.0 0.0029894710828462156 0.0015943845775179817 31 0.0 0.0 0.0 0.006078591201787305 0.0016940336136128556 32 0.0 0.0 0.0 0.010164201681677133 0.0016940336136128556 33 0.0 0.0 0.0 0.013054023728428475 0.0016940336136128556 34 0.0 0.0 0.0 0.016442090955654187 0.0017936826497077295 35 0.0 0.0 0.0 0.0217234898686825 0.0017936826497077295 36 0.0 0.0 0.0 0.028101028178754428 0.0017936826497077295 37 0.0 0.0 0.0 0.03806593178824181 0.0017936826497077295 38 0.0 0.0 0.0 0.05141890262495491 0.0018933316858026031 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGCCG 30 0.0057456363 29.332205 5 GGTATCA 500 0.0 25.092789 1 GTATCAA 1085 0.0 24.141335 1 GTATATG 145 2.928573E-10 19.734194 1 GTCCTAC 295 0.0 19.399717 1 TCTATAC 125 2.287743E-8 19.359255 3 ACACGCT 260 0.0 18.614668 9 AACGTAT 60 0.0074107638 18.333542 23 TAGGGCG 60 0.007412894 18.332628 5 ATAGCAC 85 1.4309474E-4 18.116951 3 ATACCGT 280 0.0 18.070734 6 CAATACG 245 0.0 17.959387 38 ACCGTCG 270 0.0 17.925236 8 CCGTCGT 285 0.0 17.753702 9 CGTCGTA 280 0.0 17.28505 10 TAGGACC 575 0.0 17.216728 4 CGCAATA 245 0.0 17.060566 36 GTGTAGG 285 0.0 16.991116 1 AATACGA 260 0.0 16.92327 39 CTACTAT 105 3.756857E-5 16.77045 1 >>END_MODULE