##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062118_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 679486 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.260574905148893 32.0 32.0 32.0 32.0 32.0 2 31.428204554619228 32.0 32.0 32.0 32.0 32.0 3 31.555206435452682 32.0 32.0 32.0 32.0 32.0 4 31.63285777779086 32.0 32.0 32.0 32.0 32.0 5 31.601740138869676 32.0 32.0 32.0 32.0 32.0 6 35.23167511913417 36.0 36.0 36.0 36.0 36.0 7 35.23498644563685 36.0 36.0 36.0 36.0 36.0 8 35.198764948799536 36.0 36.0 36.0 36.0 36.0 9 35.28339215230336 36.0 36.0 36.0 36.0 36.0 10 35.15508487297752 36.0 36.0 36.0 36.0 36.0 11 35.27750240623059 36.0 36.0 36.0 36.0 36.0 12 35.202709106589396 36.0 36.0 36.0 36.0 36.0 13 35.223420350088155 36.0 36.0 36.0 36.0 36.0 14 35.20545530003562 36.0 36.0 36.0 36.0 36.0 15 35.17176512834701 36.0 36.0 36.0 36.0 36.0 16 35.18622017230671 36.0 36.0 36.0 36.0 36.0 17 35.17079822100823 36.0 36.0 36.0 36.0 36.0 18 35.16092605292824 36.0 36.0 36.0 36.0 36.0 19 35.1553144582817 36.0 36.0 36.0 36.0 36.0 20 35.15004282648943 36.0 36.0 36.0 36.0 36.0 21 35.1401544697021 36.0 36.0 36.0 36.0 36.0 22 35.13612642497417 36.0 36.0 36.0 36.0 36.0 23 35.1091884159497 36.0 36.0 36.0 36.0 36.0 24 35.08646682933865 36.0 36.0 36.0 36.0 36.0 25 35.0615288615218 36.0 36.0 36.0 36.0 36.0 26 35.02354279558372 36.0 36.0 36.0 36.0 36.0 27 35.015680970616025 36.0 36.0 36.0 36.0 36.0 28 34.993518630258755 36.0 36.0 36.0 36.0 36.0 29 34.97538433462941 36.0 36.0 36.0 36.0 36.0 30 34.96254521800302 36.0 36.0 36.0 36.0 36.0 31 34.9485993824744 36.0 36.0 36.0 36.0 36.0 32 34.92223239330906 36.0 36.0 36.0 32.0 36.0 33 34.8989706925529 36.0 36.0 36.0 32.0 36.0 34 34.87853465707903 36.0 36.0 36.0 32.0 36.0 35 34.86385738631848 36.0 36.0 36.0 32.0 36.0 36 34.85404114286387 36.0 36.0 36.0 32.0 36.0 37 34.8315947642777 36.0 36.0 36.0 32.0 36.0 38 34.82512369644113 36.0 36.0 36.0 32.0 36.0 39 34.79836965000015 36.0 36.0 36.0 32.0 36.0 40 34.79223707331718 36.0 36.0 36.0 32.0 36.0 41 34.77426760816264 36.0 36.0 36.0 32.0 36.0 42 34.737101279496564 36.0 36.0 36.0 32.0 36.0 43 34.72629016639048 36.0 36.0 36.0 32.0 36.0 44 34.67538256858861 36.0 36.0 36.0 32.0 36.0 45 34.66052722204725 36.0 36.0 36.0 32.0 36.0 46 34.64238262451323 36.0 36.0 36.0 32.0 36.0 47 34.60855116956052 36.0 36.0 36.0 32.0 36.0 48 34.58378539072181 36.0 36.0 36.0 32.0 36.0 49 34.566020491960096 36.0 36.0 36.0 32.0 36.0 50 34.167385347159474 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 3.0 21 14.0 22 43.0 23 149.0 24 333.0 25 772.0 26 1660.0 27 3114.0 28 5604.0 29 8755.0 30 13298.0 31 19421.0 32 29638.0 33 49552.0 34 112405.0 35 434722.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.403645185461066 18.359004102710557 12.575904561560531 25.661446150267846 2 15.982444831027085 19.8315421998122 37.731692025114135 26.45432094404658 3 18.2609156359826 23.446173861341844 29.26882752206086 29.0240829806147 4 12.439844235201313 16.170899768354317 35.83561692220296 35.55363907424141 5 14.27963825544346 36.797280293163205 33.77925929196376 15.143822159429568 6 33.951742864080884 35.85450745785411 16.692642221682597 13.501107456382409 7 29.92114627821618 31.039785955854864 20.321537161913565 18.71753060401539 8 28.322732182855866 33.20524631854078 19.021436791928018 19.45058470667534 9 27.157881104246446 14.18748877828241 19.03276888707052 39.621861230400626 10 16.466711602593726 26.896507065634907 31.318231722213557 25.31854960955781 11 36.83239978454302 21.688747082353427 21.67991687834628 19.798936254757272 12 23.830954574487187 24.15193249014696 29.122454325769777 22.89465860959608 13 29.369552867903092 20.213808673026374 25.06600577495342 25.350632684117112 14 23.234621463871218 19.570233970972176 25.605089729589718 31.59005483556688 15 25.37653461587141 27.013360098662815 22.51996361955949 25.09014166590629 16 25.53433850636879 26.163932978652948 23.7996423762114 24.50208613876686 17 23.251251681418015 26.325781546639664 25.670874749442962 24.752092022499358 18 24.210577438173672 25.695674953346952 25.944245927792263 24.14950168068711 19 25.559172668752556 25.191541841921687 25.452327200266083 23.79695828905967 20 25.9931830423764 24.659078533353348 25.152984185011523 24.194754239258728 21 26.329313628242524 24.287623291723452 25.170349352304537 24.21271372772949 22 25.674259660979033 24.451865086256376 25.514580138516468 24.359295114248123 23 24.433946297563597 24.797456897503256 25.715652295488496 25.052944509444654 24 24.918430390253736 25.24147106394439 25.457959825219547 24.38213872058233 25 24.766551137994217 24.966702723386096 25.513587496412725 24.753158642206966 26 24.825822175258068 25.134294267069723 25.659108904188216 24.380774653483996 27 24.658122928575214 25.083592843981613 25.510387293887714 24.747896933555463 28 24.23768350564774 25.165311453695864 25.816991059273704 24.780013981382684 29 24.638877728377185 25.26170786735131 25.543247105502893 24.556167298768617 30 24.560616005910454 25.493985053144048 25.821738580136987 24.123660360808508 31 25.069133240616054 25.05868415049633 24.917989359588514 24.9541932492991 32 24.6067557941708 24.830604760138694 25.067993571516872 25.494645874173628 33 24.700469917481136 24.71710025740234 25.635742574111713 24.94668725100481 34 25.00371608246907 25.141615855677657 25.829201491142477 24.025466570710794 35 25.206407233745708 24.780494553203763 25.695603415543015 24.317494797507514 36 24.753158642206966 24.993487714960594 25.255745159937305 24.997608482895135 37 25.1798815261783 25.02064093601678 25.067000257551786 24.732477280253136 38 24.71618252620363 24.967990510474095 25.64158790615259 24.674239057169682 39 25.400158945075646 24.757314416907047 25.17027727085418 24.672249367163126 40 25.069611646484685 24.902720299521402 25.51509674988668 24.512571304107233 41 24.408848544252287 25.47922746692687 25.581658888648505 24.53026510017234 42 25.42354172277831 25.34406555900443 25.063544136498837 24.16884858171842 43 24.991463809495777 24.724192741294555 25.342036322962354 24.942307126247314 44 25.034733464810287 25.025314220115973 24.943337356135757 24.99661495893798 45 24.955149196070494 25.210493395636334 24.926009051105634 24.908348357187535 46 25.031127385329064 25.22112953407529 24.703517173780586 25.04422590681506 47 24.83237181373992 25.20648142697357 25.403985400600458 24.557161358686052 48 25.247696700320844 25.323639360668764 24.837223677626348 24.59144026138404 49 24.84888712931906 25.642901190505974 25.206671778576776 24.301539901598183 50 24.476985908237978 25.89087162883108 25.095846057618015 24.536296405312928 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 293.0 1 165.5 2 38.0 3 87.5 4 137.0 5 143.0 6 149.0 7 120.0 8 91.0 9 105.5 10 120.0 11 252.0 12 384.0 13 690.0 14 996.0 15 1288.0 16 1580.0 17 1652.0 18 1724.0 19 1682.5 20 1641.0 21 1913.0 22 2185.0 23 2649.5 24 3114.0 25 3726.5 26 4339.0 27 5549.0 28 6759.0 29 7877.0 30 8995.0 31 10332.5 32 11670.0 33 13319.5 34 14969.0 35 17155.5 36 19342.0 37 22722.0 38 26102.0 39 28959.5 40 31817.0 41 34888.5 42 37960.0 43 38982.0 44 40004.0 45 42459.5 46 44915.0 47 47276.0 48 49637.0 49 51337.5 50 53038.0 51 51502.5 52 49967.0 53 49227.0 54 48487.0 55 47870.0 56 47253.0 57 45413.0 58 43573.0 59 39624.0 60 35675.0 61 31312.5 62 26950.0 63 23143.5 64 19337.0 65 16458.0 66 13579.0 67 12186.0 68 10793.0 69 9372.5 70 7952.0 71 6506.0 72 5060.0 73 4546.0 74 4032.0 75 2995.0 76 1958.0 77 1572.5 78 1187.0 79 978.5 80 770.0 81 595.0 82 420.0 83 332.0 84 244.0 85 189.0 86 134.0 87 93.5 88 53.0 89 38.0 90 23.0 91 16.0 92 9.0 93 9.0 94 9.0 95 9.5 96 10.0 97 8.5 98 7.0 99 6.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02634344195465396 2 0.004120761870001737 3 2.943401335715526E-4 4 0.0 5 1.471700667857763E-4 6 1.471700667857763E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 1.471700667857763E-4 17 0.0 18 2.943401335715526E-4 19 0.0 20 5.886802671431052E-4 21 0.0 22 0.0 23 1.471700667857763E-4 24 7.358503339288815E-4 25 1.471700667857763E-4 26 0.0011773605342862105 27 2.943401335715526E-4 28 0.0016188707346435393 29 0.0010301904675004343 30 0.0017660408014293155 31 1.471700667857763E-4 32 0.001471700667857763 33 7.358503339288815E-4 34 0.0010301904675004343 35 5.886802671431052E-4 36 1.471700667857763E-4 37 0.0016188707346435393 38 0.0 39 8.830204007146577E-4 40 2.943401335715526E-4 41 0.0010301904675004343 42 0.0054452924710737234 43 0.003826421736430184 44 0.003826421736430184 45 0.0016188707346435393 46 0.002943401335715526 47 8.830204007146577E-4 48 0.003826421736430184 49 0.00397359180321596 50 0.0016188707346435393 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 679486.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.57574921386757 #Duplication Level Percentage of deduplicated Percentage of total 1 79.26568483355715 49.601096154101384 2 13.57048584229719 16.983666375558588 3 3.6885804609053747 6.9244705763036025 4 1.3514072346284904 3.3826128079967486 5 0.5918413511369524 1.8517457981571233 6 0.31960351736461856 1.1999657730287003 7 0.21965717631814058 0.9621648664817178 8 0.13510607425636434 0.6763491055949139 9 0.1062137064534884 0.5981762032297954 >10 0.6183664512216985 7.503326762738058 >50 0.0784614601332924 3.4069728936978585 >100 0.05341024904923675 6.474229035882742 >500 0.0011816426780147152 0.435223647228807 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTTTGTGCTGTCCGGTGCGCTCTCGACGACCCTTGAAAATCCGCCGGAA 778 0.11449831195933396 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 1.471700667857763E-4 1.471700667857763E-4 13 0.0 0.0 0.0 1.471700667857763E-4 1.471700667857763E-4 14 0.0 0.0 0.0 1.471700667857763E-4 1.471700667857763E-4 15 0.0 0.0 0.0 1.471700667857763E-4 2.943401335715526E-4 16 0.0 0.0 0.0 1.471700667857763E-4 2.943401335715526E-4 17 0.0 0.0 0.0 1.471700667857763E-4 2.943401335715526E-4 18 0.0 0.0 0.0 1.471700667857763E-4 2.943401335715526E-4 19 0.0 0.0 0.0 1.471700667857763E-4 2.943401335715526E-4 20 0.0 0.0 0.0 1.471700667857763E-4 2.943401335715526E-4 21 0.0 0.0 0.0 1.471700667857763E-4 4.415102003573289E-4 22 0.0 0.0 0.0 1.471700667857763E-4 5.886802671431052E-4 23 0.0 0.0 0.0 2.943401335715526E-4 5.886802671431052E-4 24 0.0 0.0 0.0 8.830204007146578E-4 5.886802671431052E-4 25 0.0 0.0 0.0 0.0013245306010719869 5.886802671431052E-4 26 0.0 0.0 0.0 0.0016188707346435395 5.886802671431052E-4 27 0.0 0.0 0.0 0.001913210868215092 5.886802671431052E-4 28 0.0 0.0 0.0 0.0026490612021439737 5.886802671431052E-4 29 0.0 0.0 0.0 0.004415102003573289 5.886802671431052E-4 30 0.0 0.0 0.0 0.00794718360643192 5.886802671431052E-4 31 0.0 0.0 0.0 0.011773605342862105 5.886802671431052E-4 32 0.0 0.0 0.0 0.016041537279649618 5.886802671431052E-4 33 0.0 0.0 0.0 0.022958530418581105 7.358503339288815E-4 34 0.0 0.0 0.0 0.028403822889654828 7.358503339288815E-4 35 0.0 0.0 0.0 0.035615156162157866 7.358503339288815E-4 36 0.0 0.0 0.0 0.04444536016930444 7.358503339288815E-4 37 0.0 0.0 0.0 0.06004538724859673 7.358503339288815E-4 38 0.0 0.0 0.0 0.07917749593074766 7.358503339288815E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACACG 25 0.0023522438 35.19947 4 GGTATCA 500 0.0 26.403488 1 GCTATCG 60 9.745912E-6 25.66628 13 GTATCAA 1120 0.0 25.53909 1 GCGCTAT 65 1.8120862E-5 23.691952 11 TGCGCTA 70 3.213054E-5 21.999668 10 CGCAATA 140 7.2759576E-12 21.999668 36 ATACGAA 150 0.0 21.999668 40 TATCGGT 70 3.213054E-5 21.999668 15 CGCTATC 75 5.468748E-5 20.533024 12 GCAATAC 155 3.45608E-11 19.870668 37 CAATACG 155 3.45608E-11 19.870668 38 AATACGA 155 3.45608E-11 19.870668 39 TCTAGCG 160 5.2750693E-11 19.251125 28 CTATCGG 80 8.982232E-5 19.24971 14 TACGAAT 165 8.185452E-11 18.666386 41 GTATAGG 95 1.5936168E-5 18.528765 1 TCCCGAC 95 1.595639E-5 18.526037 2 ACGGCCC 60 0.0074063437 18.334406 25 GCGCAAT 170 1.2551027E-10 18.117374 35 >>END_MODULE