##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062117_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2259452 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.226264156087407 32.0 32.0 32.0 32.0 32.0 2 30.795958489049557 32.0 32.0 32.0 32.0 32.0 3 30.82149122884664 32.0 32.0 32.0 32.0 32.0 4 30.836575417402095 32.0 32.0 32.0 32.0 32.0 5 30.762518522190337 32.0 32.0 32.0 32.0 32.0 6 34.376719664768274 36.0 36.0 36.0 32.0 36.0 7 34.32220025032618 36.0 36.0 36.0 32.0 36.0 8 34.28432867792721 36.0 36.0 36.0 32.0 36.0 9 34.41322763218692 36.0 36.0 36.0 32.0 36.0 10 34.133720034769496 36.0 36.0 36.0 32.0 36.0 11 34.38613522216892 36.0 36.0 36.0 32.0 36.0 12 34.239592609181344 36.0 36.0 36.0 32.0 36.0 13 34.29869145261772 36.0 36.0 36.0 32.0 36.0 14 34.23131139763093 36.0 36.0 36.0 32.0 36.0 15 34.197631549596984 36.0 36.0 36.0 32.0 36.0 16 34.19018903698773 36.0 36.0 36.0 32.0 36.0 17 34.14004767527702 36.0 36.0 36.0 32.0 36.0 18 34.12089568621064 36.0 36.0 36.0 32.0 36.0 19 34.134770289433014 36.0 36.0 36.0 32.0 36.0 20 34.11508454262361 36.0 36.0 36.0 32.0 36.0 21 34.10414649215828 36.0 36.0 36.0 32.0 36.0 22 34.07903642122072 36.0 36.0 36.0 32.0 36.0 23 34.04514900073115 36.0 36.0 36.0 32.0 36.0 24 34.01594722968224 36.0 36.0 36.0 32.0 36.0 25 33.662495596277324 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 5.0 4 30.0 5 160.0 6 482.0 7 90.0 8 359.0 9 304.0 10 158.0 11 48.0 12 102.0 13 96.0 14 286.0 15 475.0 16 743.0 17 1037.0 18 1420.0 19 1889.0 20 2873.0 21 4141.0 22 5964.0 23 9016.0 24 12839.0 25 18310.0 26 25285.0 27 33264.0 28 44503.0 29 59301.0 30 78869.0 31 108131.0 32 153940.0 33 218594.0 34 473789.0 35 1002949.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.432979246508076 16.642715166278883 11.577979726718322 26.34632586049472 2 16.63089093521155 18.661521452603868 37.51623185506536 27.191355757119222 3 19.50192813860823 21.791573372611627 27.98919020833988 30.71730828044027 4 13.305264723405271 14.976899168122179 34.308785398185044 37.4090507102875 5 15.183169116816936 35.78488558709526 33.689437088951415 15.34250820713639 6 36.14156898226203 33.81352918486279 15.91413249650028 14.130769336374913 7 31.23223945665032 29.863010664079287 19.618450141995737 19.286299737274657 8 28.168876802588805 33.74235357655683 18.48317820070967 19.60559142014469 9 26.792795100079626 14.863307446253698 18.100691538172846 40.24320591549383 10 15.806490925246008 27.456786621966867 31.878078558497876 24.858643894289255 11 36.90188222676245 21.30116071389001 21.740849240151217 20.05610781919632 12 24.333847394683897 23.15553901105232 28.927295771402235 23.58331782286155 13 29.782127603758152 19.873378231903864 24.41862732325287 25.925866841085117 14 23.015732352391225 19.0130348206682 25.36424210790304 32.60699071903754 15 24.976734416047137 27.0977136799861 21.954557218269287 25.970994685697473 16 25.47872755244557 26.185209605036476 23.373726524448603 24.96233631806935 17 24.212927534253918 26.061870416249217 25.057726845121014 24.66747520437585 18 24.58006202924236 25.84940186087727 25.331058927780237 24.23947718210013 19 25.355724124915774 25.2406307189528 25.24470638998767 24.158938766143756 20 25.373534997269005 24.99646720436038 25.110889914544 24.519107883826617 21 25.382580398806788 24.690865823762735 25.14988256578044 24.776671211650044 22 25.282960689419298 24.588960501576288 25.12652821809637 25.001550590908046 23 24.85677382090327 24.82045235287812 25.11168851417733 25.211085312041277 24 24.738256597351267 24.838590645500094 25.28382575276007 25.139327004388562 25 24.877142748299224 24.86403088729204 25.12077530079761 25.138051063611133 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 340.0 1 340.0 2 464.0 3 588.0 4 588.0 5 588.0 6 1353.5 7 2119.0 8 2119.0 9 2119.0 10 2814.0 11 3509.0 12 3509.0 13 3509.0 14 5023.5 15 6538.0 16 6538.0 17 6538.0 18 10668.5 19 14799.0 20 14799.0 21 14799.0 22 22369.5 23 29940.0 24 29940.0 25 29940.0 26 42226.5 27 54513.0 28 54513.0 29 54513.0 30 70788.5 31 87064.0 32 87064.0 33 87064.0 34 107559.5 35 128055.0 36 128055.0 37 128055.0 38 153032.0 39 178009.0 40 178009.0 41 178009.0 42 206260.0 43 234511.0 44 234511.0 45 234511.0 46 260577.5 47 286644.0 48 286644.0 49 286644.0 50 300111.5 51 313579.0 52 313579.0 53 313579.0 54 305160.5 55 296742.0 56 296742.0 57 296742.0 58 271628.5 59 246515.0 60 246515.0 61 246515.0 62 210659.5 63 174804.0 64 174804.0 65 174804.0 66 140760.0 67 106716.0 68 106716.0 69 106716.0 70 80397.0 71 54078.0 72 54078.0 73 54078.0 74 38974.0 75 23870.0 76 23870.0 77 23870.0 78 16938.0 79 10006.0 80 10006.0 81 10006.0 82 6877.5 83 3749.0 84 3749.0 85 3749.0 86 2541.5 87 1334.0 88 1334.0 89 1334.0 90 870.0 91 406.0 92 406.0 93 406.0 94 293.0 95 180.0 96 180.0 97 180.0 98 512.0 99 844.0 100 844.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.001106462983059609 2 2.655511159343062E-4 3 8.409118671253029E-4 4 0.010002425366858867 5 0.03306111393382112 6 0.06262580484117387 7 0.10365345225302419 8 0.10405177892692564 9 0.11502789171887697 10 0.12910210086339519 11 0.13640475655158862 12 0.12888080826678328 13 0.12436643929590006 14 0.11392142873581737 15 0.12834970603491466 16 0.11666545693380517 17 0.11963077772840494 18 0.10852188937848647 19 0.0953771091397383 20 0.08997756978240741 21 0.08931369199257165 22 0.09949315143672006 23 0.08117012443725292 24 0.08820722900951204 25 0.08648114675593904 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2259452.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.83687853159249 #Duplication Level Percentage of deduplicated Percentage of total 1 68.64022885308539 36.95375663144268 2 16.07191537599501 17.30523511734954 3 6.47011486288078 10.449923638750914 4 3.1095421449485228 6.696321709858448 5 1.7769626662796585 4.783306160983635 6 1.0585395702912601 3.4193079759992804 7 0.7097943845397358 2.674917984401054 8 0.462849355054721 1.9934691605205552 9 0.33435900245811756 1.6200760501153901 >10 1.3235203434356513 11.355942881923012 >50 0.030596938398293416 1.0982535922401009 >100 0.010833358486462578 1.0824788770857527 >500 4.1285785914434766E-4 0.14785386040701848 >1k 3.302862873151217E-4 0.4191563589226048 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4129 0.18274342628212503 No Hit TATCAACGCAGAGTACTTTTTTTTT 2477 0.10962835236154607 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 8.851703864476873E-5 0.0 0.0 0.0 0.0 8 8.851703864476873E-5 0.0 0.0 0.0 0.0 9 8.851703864476873E-5 0.0 0.0 0.0 0.0 10 8.851703864476873E-5 0.0 0.0 0.0 0.0 11 8.851703864476873E-5 0.0 0.0 0.0 0.0 12 8.851703864476873E-5 0.0 0.0 0.0 0.0 13 1.327755579671531E-4 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 570 0.0 13.995478 1 GTATCAA 1715 0.0 12.681034 1 CGATACC 60 4.0929776E-4 12.666784 4 ACCGTGC 195 0.0 11.693194 8 CAGTTCG 75 2.0727189E-4 11.401117 9 GTAATAC 165 8.0035534E-11 10.939253 3 CCGCGCG 70 0.001490636 10.858207 9 TGCGCAA 100 2.3970966E-5 10.451025 10 CCGATCA 120 1.5224578E-6 10.292675 9 CCGATAC 75 0.0026486455 10.1332035 3 GTGTACG 125 2.5815607E-6 9.876808 1 TGGACCG 135 6.4425694E-7 9.852162 5 GACCGTG 220 1.6370905E-11 9.50093 7 TACACCG 120 1.7002847E-5 9.5002985 5 ATAGGAC 190 1.0531949E-9 9.499878 3 CAGGACT 545 0.0 9.412931 4 CCTAGAC 285 0.0 9.333214 3 TAGGACA 275 0.0 9.32736 4 GTCTAGA 250 1.8189894E-12 9.117054 1 GAATAAG 250 1.8189894E-12 9.117054 1 >>END_MODULE