##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062115_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1353219 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.275694473695683 32.0 32.0 32.0 32.0 32.0 2 31.46446805727676 32.0 32.0 32.0 32.0 32.0 3 31.590455055685737 32.0 32.0 32.0 32.0 32.0 4 31.665442178982115 32.0 32.0 32.0 32.0 32.0 5 31.639583097783877 32.0 32.0 32.0 32.0 32.0 6 35.29242938504411 36.0 36.0 36.0 36.0 36.0 7 35.29203107553175 36.0 36.0 36.0 36.0 36.0 8 35.24670138388539 36.0 36.0 36.0 36.0 36.0 9 35.32619627717317 36.0 36.0 36.0 36.0 36.0 10 35.21007094934375 36.0 36.0 36.0 36.0 36.0 11 35.331527269422025 36.0 36.0 36.0 36.0 36.0 12 35.24803302347957 36.0 36.0 36.0 36.0 36.0 13 35.28617762535111 36.0 36.0 36.0 36.0 36.0 14 35.248647114768566 36.0 36.0 36.0 36.0 36.0 15 35.229203107553175 36.0 36.0 36.0 36.0 36.0 16 35.23399464536043 36.0 36.0 36.0 36.0 36.0 17 35.2125347042866 36.0 36.0 36.0 36.0 36.0 18 35.20702044532334 36.0 36.0 36.0 36.0 36.0 19 35.19813644354683 36.0 36.0 36.0 36.0 36.0 20 35.193718089976564 36.0 36.0 36.0 36.0 36.0 21 35.185825058619486 36.0 36.0 36.0 36.0 36.0 22 35.17372428261797 36.0 36.0 36.0 36.0 36.0 23 35.14072666730219 36.0 36.0 36.0 36.0 36.0 24 35.122054153836146 36.0 36.0 36.0 36.0 36.0 25 35.105712379149274 36.0 36.0 36.0 36.0 36.0 26 35.06719976589155 36.0 36.0 36.0 36.0 36.0 27 35.0542750286539 36.0 36.0 36.0 36.0 36.0 28 35.026210835053305 36.0 36.0 36.0 36.0 36.0 29 35.00379613351571 36.0 36.0 36.0 36.0 36.0 30 34.99027725741362 36.0 36.0 36.0 36.0 36.0 31 34.99180546533857 36.0 36.0 36.0 36.0 36.0 32 34.96463986982152 36.0 36.0 36.0 36.0 36.0 33 34.93746762349627 36.0 36.0 36.0 36.0 36.0 34 34.932511293441785 36.0 36.0 36.0 36.0 36.0 35 34.91531304245654 36.0 36.0 36.0 36.0 36.0 36 34.898184994446574 36.0 36.0 36.0 32.0 36.0 37 34.879465925323245 36.0 36.0 36.0 32.0 36.0 38 34.855250332725156 36.0 36.0 36.0 32.0 36.0 39 34.8385863633307 36.0 36.0 36.0 32.0 36.0 40 34.82568527341103 36.0 36.0 36.0 32.0 36.0 41 34.7933786031677 36.0 36.0 36.0 32.0 36.0 42 34.75399621199525 36.0 36.0 36.0 32.0 36.0 43 34.76638297274868 36.0 36.0 36.0 32.0 36.0 44 34.698288303667034 36.0 36.0 36.0 32.0 36.0 45 34.69439831985806 36.0 36.0 36.0 32.0 36.0 46 34.65031750219292 36.0 36.0 36.0 32.0 36.0 47 34.63883303441646 36.0 36.0 36.0 32.0 36.0 48 34.60326894612032 36.0 36.0 36.0 32.0 36.0 49 34.590570336360926 36.0 36.0 36.0 32.0 36.0 50 34.18440621954022 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 8.0 21 34.0 22 88.0 23 251.0 24 636.0 25 1547.0 26 3138.0 27 5981.0 28 10516.0 29 16846.0 30 24832.0 31 36822.0 32 55997.0 33 95127.0 34 217595.0 35 883798.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.78482147675217 17.998097269870556 12.019207668874692 26.197873584502577 2 16.064587360990405 20.003044760941926 37.16596311996358 26.76640475810409 3 18.4026461466155 23.662793662195085 28.617593830387385 29.316966360802034 4 12.321961428239945 16.027424997302724 35.7026731834782 35.947940390979134 5 14.572290220577749 36.735517310945234 33.25322804364999 15.438964424827024 6 34.8144940430884 35.60712316862472 16.254439417743484 13.3239433705434 7 30.442374811468063 30.268123637046184 20.43771185595236 18.85178969553339 8 28.041654750635338 33.313307010912496 19.078212765265636 19.566825473186526 9 27.196706519787263 13.832129167562679 18.529594987950954 40.4415693246991 10 16.238908853629752 26.648679925422268 30.988036674034287 26.124374546913693 11 37.74688354213176 20.956918281519844 22.02865907144372 19.267539104904678 12 24.434478085217545 23.52442583203458 28.90818115914719 23.13291492360069 13 29.493378381474102 19.252463939687516 25.161337521864528 26.09282015697385 14 23.56085748130938 19.69511217326981 24.933658188364188 31.810372157056616 15 25.22703272714912 27.38736302106311 21.927640684915005 25.457963566872767 16 25.834790358361648 25.72519941413553 23.69935575600016 24.74065447150266 17 23.99796337473831 26.110703441202055 25.07591158563396 24.81542159842568 18 24.839345677260688 24.983225146613698 26.260478741013998 23.916950435111616 19 25.708403443936273 24.9049858153041 25.161633113339377 24.224977627420248 20 25.785648094093027 24.239477274104466 24.86177352584292 25.11310110595959 21 26.950404923371607 24.241752443617774 24.339741017529313 24.46810161548131 22 25.972810018186266 24.30604358939684 25.19274411606695 24.528402276349947 23 24.354890080615185 24.228968112330673 25.767300045299397 25.64884176175475 24 24.854660077874264 24.943338306704 25.455381179671697 24.746620435750035 25 25.038888868361642 24.36242577860872 25.379559050113986 25.21912630291565 26 24.438391352124686 25.617808309273276 25.785631361258517 24.158168977343518 27 25.104769167898922 24.672982006528166 25.31996071571881 24.902288109854105 28 24.672016482497323 24.694186269068787 25.699512190796135 24.93428505763775 29 24.62365551667695 24.714180673433265 25.59497197415045 25.067191835739333 30 24.440788914581056 25.029023773999576 25.8831467017834 24.64704060963597 31 25.211201201289967 24.682680910308218 24.89669024513528 25.20942764326654 32 25.119106122132273 24.69300660284288 24.730621007164473 25.457266267860373 33 24.50641693091352 24.462152042133674 25.523327005203157 25.50810402174965 34 25.274735019542376 24.78309031911458 25.52554549801103 24.41662916333201 35 25.74914019766216 24.412031173099972 25.76162894670334 24.077199682534523 36 24.254554698503863 25.25387631556778 25.17074115183215 25.320827834096203 37 25.45373794342908 25.005542401589114 25.049733816926345 24.490985838055458 38 24.668586533295795 24.651590023492133 25.360787869517054 25.31903557369502 39 25.549784106419317 24.425940336074216 24.765280853790202 25.258994703716265 40 25.826511323378792 24.643775060633246 25.365314383935182 24.16439923205278 41 24.501922843857983 25.225243200581733 25.7535449200564 24.519289035503885 42 25.86897867154805 25.474792875095424 25.032645589723085 23.62358286363344 43 25.21493846338028 24.406840785173863 25.370498190186364 25.00772256125949 44 24.63143705737898 25.231956877267375 24.862673399543738 25.273932665809905 45 24.88774656588737 25.376370467370386 24.97649993940236 24.759383027339883 46 24.643511676027195 25.000886786875554 24.996600650310373 25.359000886786877 47 24.899812076053404 24.81985387305859 25.50969659482991 24.77063745605809 48 25.85108065405325 25.327492199751394 24.18550033181541 24.63592681437995 49 24.79099063014302 25.685187881188526 24.528347900373124 24.99547358829533 50 25.01332032707777 25.714919135822996 24.511249302576495 24.760511234522742 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 420.0 1 236.0 2 52.0 3 179.0 4 306.0 5 307.5 6 309.0 7 227.5 8 146.0 9 229.0 10 312.0 11 502.5 12 693.0 13 1296.0 14 1899.0 15 2440.0 16 2981.0 17 3058.0 18 3135.0 19 3118.5 20 3102.0 21 3636.5 22 4171.0 23 4723.5 24 5276.0 25 6915.5 26 8555.0 27 11109.5 28 13664.0 29 16035.5 30 18407.0 31 20888.5 32 23370.0 33 26699.5 34 30029.0 35 34251.5 36 38474.0 37 45208.5 38 51943.0 39 55875.5 40 59808.0 41 63953.0 42 68098.0 43 70013.5 44 71929.0 45 77890.0 46 83851.0 47 89469.5 48 95088.0 49 99848.5 50 104609.0 51 100379.5 52 96150.0 53 96110.0 54 96070.0 55 97552.0 56 99034.0 57 96372.0 58 93710.0 59 86647.5 60 79585.0 61 69385.0 62 59185.0 63 51052.0 64 42919.0 65 36169.0 66 29419.0 67 25703.5 68 21988.0 69 19675.0 70 17362.0 71 13431.5 72 9501.0 73 8393.5 74 7286.0 75 5221.5 76 3157.0 77 2872.5 78 2588.0 79 2284.5 80 1981.0 81 1554.5 82 1128.0 83 958.0 84 788.0 85 623.0 86 458.0 87 301.0 88 144.0 89 95.5 90 47.0 91 37.5 92 28.0 93 26.0 94 24.0 95 21.5 96 19.0 97 16.5 98 14.0 99 10.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03148049207112818 2 0.005542340153367637 3 4.433872122694109E-4 4 7.389786871156849E-5 5 0.0 6 7.389786871156849E-5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.694893435578424E-4 17 0.0 18 2.2169360613470546E-4 19 0.0 20 3.694893435578424E-4 21 0.0 22 0.0 23 0.0 24 8.867744245388219E-4 25 2.9559147484627395E-4 26 5.911829496925479E-4 27 4.433872122694109E-4 28 0.0019213445865007808 29 2.9559147484627395E-4 30 0.0013301616368082327 31 5.172850809809794E-4 32 0.0010345701619619589 33 1.4779573742313698E-4 34 4.433872122694109E-4 35 7.389786871156849E-5 36 7.389786871156849E-5 37 0.0011084680306735273 38 0.0 39 4.433872122694109E-4 40 7.389786871156849E-5 41 0.0011084680306735273 42 0.0036948934355784243 43 0.003029812617174308 44 0.004286076385270972 45 0.0022908339300586234 46 0.0014040595055198014 47 8.867744245388219E-4 48 0.004212178516559404 49 0.0036948934355784243 50 0.0017735488490776437 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1353219.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.25034127229113 #Duplication Level Percentage of deduplicated Percentage of total 1 70.05419210297957 33.801386765234064 2 16.41560950488713 15.8411752160694 3 6.192726870031525 8.964035546553252 4 2.7324665170134965 5.273697678440396 5 1.4352354184230915 3.4625299372496867 6 0.8289957173960619 2.3999595766576673 7 0.5224900685475162 1.7647226883160312 8 0.3519780283594758 1.3586447990954298 9 0.24357128696849661 1.0577157948325007 >10 1.0460461880067575 8.800839544033343 >50 0.08079034603819399 2.7315056319468667 >100 0.08129812946598604 8.358154313755945 >500 0.010296716485773473 3.369552456156298 >1k 0.0043031053970396605 2.8160800516592444 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2018 0.14912589905994522 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2006 0.1482391246354064 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1911 0.1412188271078074 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1820 0.13449412105505465 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1702 0.12577417254708959 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1635 0.12082301534341447 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1562 0.11542847092746997 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1451 0.10722580750048588 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 1392 0.10286583324650334 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1355 0.10013161210417529 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.389786871156849E-5 2 0.0 0.0 0.0 0.0 7.389786871156849E-5 3 0.0 0.0 0.0 0.0 7.389786871156849E-5 4 0.0 0.0 0.0 0.0 7.389786871156849E-5 5 0.0 0.0 0.0 0.0 2.2169360613470546E-4 6 0.0 0.0 0.0 0.0 2.2169360613470546E-4 7 0.0 0.0 0.0 0.0 2.2169360613470546E-4 8 0.0 0.0 0.0 0.0 2.2169360613470546E-4 9 0.0 0.0 0.0 0.0 2.2169360613470546E-4 10 0.0 0.0 0.0 7.389786871156849E-5 2.2169360613470546E-4 11 0.0 0.0 0.0 7.389786871156849E-5 2.9559147484627395E-4 12 0.0 0.0 0.0 7.389786871156849E-5 2.9559147484627395E-4 13 0.0 0.0 0.0 1.4779573742313698E-4 3.6948934355784247E-4 14 0.0 0.0 0.0 1.4779573742313698E-4 4.433872122694109E-4 15 0.0 0.0 0.0 1.4779573742313698E-4 5.172850809809794E-4 16 0.0 0.0 0.0 2.2169360613470546E-4 5.172850809809794E-4 17 0.0 0.0 0.0 2.2169360613470546E-4 5.172850809809794E-4 18 0.0 0.0 0.0 2.2169360613470546E-4 5.172850809809794E-4 19 0.0 0.0 0.0 2.9559147484627395E-4 5.172850809809794E-4 20 0.0 0.0 0.0 3.6948934355784247E-4 5.911829496925479E-4 21 0.0 0.0 0.0 5.172850809809794E-4 6.650808184041164E-4 22 0.0 0.0 0.0 8.128765558272534E-4 6.650808184041164E-4 23 0.0 0.0 0.0 0.0011084680306735273 6.650808184041164E-4 24 0.0 0.0 0.0 0.0015518552429429383 6.650808184041164E-4 25 0.0 0.0 0.0 0.0019213445865007806 6.650808184041164E-4 26 0.0 0.0 0.0 0.0022169360613470547 8.867744245388219E-4 27 0.0 0.0 0.0 0.002882016879751171 8.867744245388219E-4 28 0.0 0.0 0.0 0.003768791304289993 8.867744245388219E-4 29 0.0 0.0 0.0 0.0059118294969254795 8.867744245388219E-4 30 0.0 0.0 0.0 0.009015539982811356 8.867744245388219E-4 31 0.0 0.0 0.0 0.01566634816685252 8.867744245388219E-4 32 0.0 0.0 0.0 0.023277828644144075 8.867744245388219E-4 33 0.0 0.0 0.0 0.03029812617174308 8.867744245388219E-4 34 0.0 0.0 0.0 0.03650554714351483 0.0010345701619619589 35 0.0 0.0 0.0 0.044929904176633645 0.0011084680306735273 36 0.0 0.0 0.0 0.056679665301773034 0.0011084680306735273 37 0.0 0.0 0.0 0.07367617510543378 0.0011084680306735273 38 0.0 0.0 0.0 0.09702790161828943 0.0013301616368082327 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1940 0.0 24.841019 1 GGTATCA 885 0.0 22.626904 1 TACGAAT 435 0.0 21.241772 41 ATACGAA 445 0.0 20.76443 40 CGCAATA 460 0.0 20.086586 36 GATATAC 345 0.0 19.772865 1 CAATACG 465 0.0 19.398207 38 CGAATGC 470 0.0 19.192553 43 AATACGA 495 0.0 18.22256 39 GCAATAC 510 0.0 18.117981 37 TAGCGGC 505 0.0 17.862375 30 GTCCTAA 210 0.0 17.813803 1 GCGCAAT 520 0.0 17.768902 35 TTAGACC 75 0.0012914584 17.599024 4 AACGCAG 2795 0.0 17.236969 6 CTAGCGG 525 0.0 17.181904 29 TCTAGCG 535 0.0 16.860746 28 ATACACT 445 0.0 16.808058 4 TCAACGC 2880 0.0 16.72824 4 ATCAACG 2905 0.0 16.50855 3 >>END_MODULE