##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062114_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1070754 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.05548706799134 32.0 32.0 32.0 32.0 32.0 2 30.969110552003542 32.0 32.0 32.0 32.0 32.0 3 31.29850367124475 32.0 32.0 32.0 32.0 32.0 4 31.46092099585899 32.0 32.0 32.0 32.0 32.0 5 31.38379310280419 32.0 32.0 32.0 32.0 32.0 6 34.994461846511896 36.0 36.0 36.0 36.0 36.0 7 35.00594347534541 36.0 36.0 36.0 36.0 36.0 8 34.91749085224057 36.0 36.0 36.0 36.0 36.0 9 35.07381434017524 36.0 36.0 36.0 36.0 36.0 10 34.87034089996395 36.0 36.0 36.0 32.0 36.0 11 35.085078365338816 36.0 36.0 36.0 36.0 36.0 12 34.95294810946305 36.0 36.0 36.0 32.0 36.0 13 35.02855090898563 36.0 36.0 36.0 36.0 36.0 14 34.97186281816365 36.0 36.0 36.0 32.0 36.0 15 34.93275859814673 36.0 36.0 36.0 32.0 36.0 16 34.94158975824512 36.0 36.0 36.0 32.0 36.0 17 34.909135058099245 36.0 36.0 36.0 32.0 36.0 18 34.914144612114455 36.0 36.0 36.0 32.0 36.0 19 34.9043655218659 36.0 36.0 36.0 32.0 36.0 20 34.90776779727183 36.0 36.0 36.0 32.0 36.0 21 34.89984347478506 36.0 36.0 36.0 32.0 36.0 22 34.88085405237804 36.0 36.0 36.0 32.0 36.0 23 34.841860035078085 36.0 36.0 36.0 32.0 36.0 24 34.8181776579868 36.0 36.0 36.0 32.0 36.0 25 34.79594659464265 36.0 36.0 36.0 32.0 36.0 26 34.74414291237763 36.0 36.0 36.0 32.0 36.0 27 34.72767694540482 36.0 36.0 36.0 32.0 36.0 28 34.69690797325996 36.0 36.0 36.0 32.0 36.0 29 34.67271847688638 36.0 36.0 36.0 32.0 36.0 30 34.645752432398105 36.0 36.0 36.0 32.0 36.0 31 34.6608604777568 36.0 36.0 36.0 32.0 36.0 32 34.62137428391582 36.0 36.0 36.0 32.0 36.0 33 34.59147946213603 36.0 36.0 36.0 32.0 36.0 34 34.5863055379667 36.0 36.0 36.0 32.0 36.0 35 34.570893968175696 36.0 36.0 36.0 32.0 36.0 36 34.54628327328219 36.0 36.0 36.0 32.0 36.0 37 34.52288947788194 36.0 36.0 36.0 32.0 36.0 38 34.507242559915724 36.0 36.0 36.0 32.0 36.0 39 34.491264099877284 36.0 36.0 36.0 32.0 36.0 40 34.47249134721888 36.0 36.0 36.0 32.0 36.0 41 34.43497759522729 36.0 36.0 36.0 32.0 36.0 42 34.393442377987846 36.0 36.0 36.0 32.0 36.0 43 34.403851865134286 36.0 36.0 36.0 32.0 36.0 44 34.32949304882354 36.0 36.0 36.0 32.0 36.0 45 34.30636168531708 36.0 36.0 36.0 32.0 36.0 46 34.29615766086328 36.0 36.0 36.0 32.0 36.0 47 34.27481569062549 36.0 36.0 36.0 32.0 36.0 48 34.244615476570715 36.0 36.0 36.0 32.0 36.0 49 34.241286047028545 36.0 36.0 36.0 32.0 36.0 50 33.71438724487604 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 6.0 21 27.0 22 62.0 23 193.0 24 536.0 25 1299.0 26 2847.0 27 5518.0 28 9827.0 29 16525.0 30 25889.0 31 40829.0 32 65247.0 33 114386.0 34 244266.0 35 543294.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.377523347592096 18.15054000502591 12.230990057480337 26.24094658990166 2 16.450223727749805 20.061248448475375 36.07391654782152 27.414611275953305 3 18.08339948634135 23.609806210600045 28.586971748774225 29.71982255428438 4 12.35951488390424 15.68418142729329 35.86108480566031 36.09521888314216 5 15.122707923575348 36.385294848303154 32.39717059193802 16.094826636183473 6 35.07466728928321 35.4169507354658 15.983095960775156 13.525286014475835 7 30.944455962807517 30.14006952110382 20.01907067356274 18.89640384252592 8 28.72984831249755 32.1184884670055 18.91993866004703 20.231724560449926 9 27.279468486692554 13.738169551549657 18.40142553751842 40.58093642423937 10 16.344479072204326 25.887949881998928 30.367414333651176 27.400156712145563 11 38.05748099003132 20.924227226795324 21.655394236211116 19.362897546962234 12 24.768247421910168 23.321416497159944 27.9279834583854 23.982352622544486 13 29.13171466088383 18.83681966165898 25.30740020583626 26.724065471620932 14 24.059774700818302 19.343098414761933 24.401496515539517 32.195630368880245 15 25.561053239119346 26.849771282666236 21.64988410036292 25.939291377851497 16 26.469670791501283 25.48148494046229 22.936633201027316 25.112211067009106 17 24.32696959338933 25.855892203064386 24.595752152221706 25.22138605132458 18 25.495795949205842 24.416088490996522 25.4694593430978 24.618656216699836 19 25.90595038636325 24.636284337952507 24.929162067104116 24.528603208580122 20 26.28374611138143 23.615810555749086 24.212493450870557 25.887949881998928 21 27.473910907640786 23.784734869073567 23.827601858129878 24.91375236515577 22 26.279051957779288 23.773994773776234 24.696709048016633 25.25024422042785 23 24.582303685066783 23.67294448584829 25.217090013205645 26.527661815879277 24 24.927667252551025 24.69231731895333 24.96605170600684 25.41396372248881 25 25.22012649101376 23.875365632249604 24.93976173665512 25.964746140081512 26 25.01779126780294 25.019845902404857 25.253327107167873 24.70903572262433 27 25.650058370301192 24.170628064440812 24.59304226009806 25.586271305159936 28 24.85759835029825 24.0378841155501 25.428792637608232 25.675724896543418 29 24.792247647901554 24.41167186242115 25.371750162970493 25.4243303267068 30 24.81963290568237 24.557102470924125 25.563702622409135 25.05956200098437 31 25.606422432189863 24.23261517426619 24.28640939456286 25.874552998981088 32 25.579738162881444 24.25196732733002 24.053600213683595 26.114694296104947 33 24.704646275974785 24.00588372636003 25.01685734298389 26.2726126546813 34 25.77100451460944 24.032310183741053 25.063367035692874 25.133318265956632 35 26.53168339948634 23.673126313331778 25.094559887929023 24.70063039925286 36 24.807541622655503 24.59507392475001 24.56425443450438 26.033130018090105 37 26.228171597533663 24.351055066692318 24.53840248501501 24.88237085075901 38 25.136212426010086 23.825080270538333 25.157225655939648 25.88148164751194 39 26.099982815687035 23.995091263644717 24.06578976860949 25.839136152058757 40 26.03532280553965 24.235094368168944 24.951319305199238 24.778263521092168 41 24.76560756182366 24.868713150725615 25.3152238577367 25.050455429714024 42 26.579023805721256 24.84279108515946 24.40523055283929 24.172954556279997 43 25.801471535922627 23.627229578656564 24.940460513412496 25.630838372008313 44 25.22977378921051 24.593290353189936 24.362138995280777 25.81479686231878 45 25.426392933392854 24.891895779125566 24.38728488894451 25.294426398537066 46 25.177449361555876 24.656775576990608 24.569638601026593 25.596136460426926 47 25.301263330721437 24.298126250886067 25.047233644737616 25.35337677365488 48 26.58724265883634 24.985220073801564 23.600997096316554 24.82654017104554 49 25.22106702430897 25.118238636575903 24.0367193541518 25.623974984963333 50 25.76311424579545 24.928834530009038 23.98397749602146 25.324073728174056 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 66.0 1 46.0 2 26.0 3 70.0 4 114.0 5 134.0 6 154.0 7 123.5 8 93.0 9 128.0 10 163.0 11 259.0 12 355.0 13 685.5 14 1016.0 15 1335.0 16 1654.0 17 1689.5 18 1725.0 19 1752.5 20 1780.0 21 2204.5 22 2629.0 23 3184.5 24 3740.0 25 4886.0 26 6032.0 27 7479.5 28 8927.0 29 10281.0 30 11635.0 31 13019.5 32 14404.0 33 16188.0 34 17972.0 35 20993.0 36 24014.0 37 29910.0 38 35806.0 39 39974.0 40 44142.0 41 48810.0 42 53478.0 43 54762.5 44 56047.0 45 61825.0 46 67603.0 47 72557.5 48 77512.0 49 81321.0 50 85130.0 51 82144.5 52 79159.0 53 78345.5 54 77532.0 55 80392.5 56 83253.0 57 80986.0 58 78719.0 59 71725.5 60 64732.0 61 57340.5 62 49949.0 63 43327.5 64 36706.0 65 30887.5 66 25069.0 67 21598.5 68 18128.0 69 16794.5 70 15461.0 71 12199.5 72 8938.0 73 7994.0 74 7050.0 75 5078.5 76 3107.0 77 2785.0 78 2463.0 79 2112.5 80 1762.0 81 1390.0 82 1018.0 83 901.0 84 784.0 85 599.5 86 415.0 87 281.5 88 148.0 89 104.5 90 61.0 91 46.0 92 31.0 93 24.5 94 18.0 95 18.0 96 18.0 97 14.0 98 10.0 99 8.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02811103203910515 2 0.003081940389669336 3 3.735685320811316E-4 4 0.0 5 0.0 6 3.735685320811316E-4 7 0.0 8 0.0 9 0.0 10 9.33921330202829E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.735685320811316E-4 17 0.0 18 9.33921330202829E-5 19 0.0 20 9.33921330202829E-5 21 0.0 22 0.0 23 0.0 24 7.471370641622632E-4 25 5.603527981216974E-4 26 3.735685320811316E-4 27 3.735685320811316E-4 28 0.0014008819953042434 29 7.471370641622632E-4 30 0.0019612347934259413 31 6.537449311419803E-4 32 0.0011207055962433948 33 3.735685320811316E-4 34 7.471370641622632E-4 35 3.735685320811316E-4 36 2.801763990608487E-4 37 0.0014942741283245264 38 0.0 39 9.33921330202829E-4 40 9.33921330202829E-5 41 6.537449311419803E-4 42 0.0042026459859127304 43 0.003362116788730185 44 0.002521587591547638 45 0.002614979724567921 46 0.0024281954585273556 47 0.0012140977292636778 48 0.0042026459859127304 49 0.00354890105477075 50 9.33921330202829E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1070754.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.765412618583895 #Duplication Level Percentage of deduplicated Percentage of total 1 80.00068390117308 41.41268411913126 2 11.669596874218367 12.081629945729013 3 3.317895645370555 5.152567113240284 4 1.3986679105677668 2.8961048602765214 5 0.8002984402238985 2.07138894880996 6 0.5029507029347124 1.5621270398533318 7 0.3770983661364987 1.3664456764594777 8 0.26473254165076215 1.0963191401694519 9 0.21804905508225877 1.0158659376682908 >10 1.2474796958568088 11.83508414447872 >50 0.09792643248616725 3.515012969819562 >100 0.08920841236869988 9.513364308575476 >500 0.01232961754439313 4.303854684161609 >1k 0.0030824043860982826 2.1775511116271065 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1883 0.1758573864771927 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1677 0.15661860707501443 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1631 0.1523225689560814 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1552 0.14494459044747907 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1531 0.14298335565405312 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1488 0.13896749393418095 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1486 0.1387807096681404 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1431 0.13364414235202485 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1404 0.13112255476047718 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1299 0.12131638079334749 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1275 0.1190749696008607 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1166 0.10889522710164988 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG 1144 0.10684060017520365 No Hit CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACC 1094 0.1021709935241895 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG 1091 0.10189081712512864 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.867842660405658E-4 2 0.0 0.0 0.0 0.0 1.867842660405658E-4 3 0.0 0.0 0.0 0.0 1.867842660405658E-4 4 0.0 0.0 0.0 0.0 1.867842660405658E-4 5 0.0 1.867842660405658E-4 0.0 0.0 1.867842660405658E-4 6 0.0 1.867842660405658E-4 0.0 0.0 1.867842660405658E-4 7 0.0 1.867842660405658E-4 0.0 0.0 1.867842660405658E-4 8 0.0 1.867842660405658E-4 0.0 0.0 1.867842660405658E-4 9 0.0 1.867842660405658E-4 0.0 9.33921330202829E-5 1.867842660405658E-4 10 0.0 1.867842660405658E-4 0.0 9.33921330202829E-5 1.867842660405658E-4 11 0.0 1.867842660405658E-4 0.0 9.33921330202829E-5 1.867842660405658E-4 12 0.0 1.867842660405658E-4 0.0 9.33921330202829E-5 2.801763990608487E-4 13 0.0 3.735685320811316E-4 0.0 9.33921330202829E-5 4.669606651014145E-4 14 0.0 3.735685320811316E-4 0.0 9.33921330202829E-5 4.669606651014145E-4 15 0.0 3.735685320811316E-4 0.0 9.33921330202829E-5 6.537449311419803E-4 16 0.0 3.735685320811316E-4 0.0 9.33921330202829E-5 7.471370641622632E-4 17 0.0 3.735685320811316E-4 0.0 9.33921330202829E-5 7.471370641622632E-4 18 0.0 3.735685320811316E-4 0.0 9.33921330202829E-5 7.471370641622632E-4 19 0.0 3.735685320811316E-4 0.0 9.33921330202829E-5 7.471370641622632E-4 20 0.0 3.735685320811316E-4 0.0 9.33921330202829E-5 7.471370641622632E-4 21 0.0 3.735685320811316E-4 0.0 9.33921330202829E-5 7.471370641622632E-4 22 0.0 3.735685320811316E-4 0.0 1.867842660405658E-4 7.471370641622632E-4 23 0.0 3.735685320811316E-4 0.0 1.867842660405658E-4 7.471370641622632E-4 24 0.0 3.735685320811316E-4 0.0 1.867842660405658E-4 7.471370641622632E-4 25 0.0 3.735685320811316E-4 0.0 1.867842660405658E-4 7.471370641622632E-4 26 0.0 3.735685320811316E-4 0.0 1.867842660405658E-4 8.405291971825461E-4 27 0.0 3.735685320811316E-4 0.0 1.867842660405658E-4 9.33921330202829E-4 28 0.0 3.735685320811316E-4 0.0 1.867842660405658E-4 9.33921330202829E-4 29 0.0 3.735685320811316E-4 9.33921330202829E-5 4.669606651014145E-4 9.33921330202829E-4 30 0.0 3.735685320811316E-4 9.33921330202829E-5 8.405291971825461E-4 9.33921330202829E-4 31 0.0 3.735685320811316E-4 9.33921330202829E-5 0.0022414111924867895 9.33921330202829E-4 32 0.0 3.735685320811316E-4 9.33921330202829E-5 0.003642293187791033 9.33921330202829E-4 33 0.0 3.735685320811316E-4 9.33921330202829E-5 0.005229959449135842 9.33921330202829E-4 34 0.0 3.735685320811316E-4 9.33921330202829E-5 0.0070978021095415 0.001027313463223112 35 0.0 3.735685320811316E-4 9.33921330202829E-5 0.009152429035987725 0.001027313463223112 36 0.0 3.735685320811316E-4 9.33921330202829E-5 0.011954193026596211 0.001027313463223112 37 0.0 3.735685320811316E-4 9.33921330202829E-5 0.015503094081366962 0.001027313463223112 38 0.0 3.735685320811316E-4 9.33921330202829E-5 0.021386798461644783 0.001027313463223112 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1410 0.0 26.535328 1 GGTATCA 590 0.0 24.246887 1 GTACGTA 50 0.0025813126 21.998436 11 CTTACAC 215 0.0 20.462706 3 CGTCGTA 490 0.0 20.203588 10 GAGTATA 55 0.0044730194 20.007921 1 CGTAGTC 55 0.0044851275 19.998579 14 GTATAAG 155 3.274181E-11 19.87884 1 ACCGTCG 465 0.0 19.869555 8 ATACCGT 465 0.0 19.869555 6 CCGTCGT 480 0.0 19.248632 9 TACCGTC 480 0.0 19.248632 7 CTAGCGG 435 0.0 18.205603 29 CGCAATA 415 0.0 18.026182 36 GTCGTAG 515 0.0 17.940474 11 GTATAGG 135 5.498805E-8 17.933025 1 TAGCGGC 445 0.0 17.796488 30 TCTAGCG 460 0.0 17.694393 28 GCGCAAT 460 0.0 17.21858 35 TATACTC 90 2.2162775E-4 17.109894 5 >>END_MODULE