##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062112_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1035961 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.274155108155615 32.0 32.0 32.0 32.0 32.0 2 31.452440777210725 32.0 32.0 32.0 32.0 32.0 3 31.570130535802022 32.0 32.0 32.0 32.0 32.0 4 31.650637427470727 32.0 32.0 32.0 32.0 32.0 5 31.623264775411428 32.0 32.0 32.0 32.0 32.0 6 35.26683919568401 36.0 36.0 36.0 36.0 36.0 7 35.273564352326005 36.0 36.0 36.0 36.0 36.0 8 35.22320048727703 36.0 36.0 36.0 36.0 36.0 9 35.32329691947863 36.0 36.0 36.0 36.0 36.0 10 35.20076141862483 36.0 36.0 36.0 36.0 36.0 11 35.31746079244296 36.0 36.0 36.0 36.0 36.0 12 35.24370994660996 36.0 36.0 36.0 36.0 36.0 13 35.26733342278329 36.0 36.0 36.0 36.0 36.0 14 35.23842403333716 36.0 36.0 36.0 36.0 36.0 15 35.21236320672303 36.0 36.0 36.0 36.0 36.0 16 35.2282431481494 36.0 36.0 36.0 36.0 36.0 17 35.21867908154844 36.0 36.0 36.0 36.0 36.0 18 35.20778871019276 36.0 36.0 36.0 36.0 36.0 19 35.20037530370352 36.0 36.0 36.0 36.0 36.0 20 35.207135210688435 36.0 36.0 36.0 36.0 36.0 21 35.197099118596164 36.0 36.0 36.0 36.0 36.0 22 35.17862448489856 36.0 36.0 36.0 36.0 36.0 23 35.15191595050393 36.0 36.0 36.0 36.0 36.0 24 35.13890291236832 36.0 36.0 36.0 36.0 36.0 25 35.12787353964097 36.0 36.0 36.0 36.0 36.0 26 35.08806123010422 36.0 36.0 36.0 36.0 36.0 27 35.07126716160165 36.0 36.0 36.0 36.0 36.0 28 35.06195117383763 36.0 36.0 36.0 36.0 36.0 29 35.04240989766989 36.0 36.0 36.0 36.0 36.0 30 35.03010924156411 36.0 36.0 36.0 36.0 36.0 31 35.025750969389776 36.0 36.0 36.0 36.0 36.0 32 34.99631646365066 36.0 36.0 36.0 36.0 36.0 33 34.98417894109913 36.0 36.0 36.0 36.0 36.0 34 34.97566414179684 36.0 36.0 36.0 36.0 36.0 35 34.963428159940385 36.0 36.0 36.0 36.0 36.0 36 34.93164800605428 36.0 36.0 36.0 36.0 36.0 37 34.93186519569752 36.0 36.0 36.0 36.0 36.0 38 34.92762661914879 36.0 36.0 36.0 36.0 36.0 39 34.9006671100553 36.0 36.0 36.0 36.0 36.0 40 34.89363692262547 36.0 36.0 36.0 36.0 36.0 41 34.867247898328216 36.0 36.0 36.0 32.0 36.0 42 34.84488026093646 36.0 36.0 36.0 32.0 36.0 43 34.834658833681964 36.0 36.0 36.0 32.0 36.0 44 34.80328892689976 36.0 36.0 36.0 32.0 36.0 45 34.778725260893026 36.0 36.0 36.0 32.0 36.0 46 34.759934012959945 36.0 36.0 36.0 32.0 36.0 47 34.73216655839361 36.0 36.0 36.0 32.0 36.0 48 34.72000104251029 36.0 36.0 36.0 32.0 36.0 49 34.70007847785776 36.0 36.0 36.0 32.0 36.0 50 34.28992790269132 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 5.0 21 25.0 22 77.0 23 191.0 24 485.0 25 1065.0 26 2356.0 27 4430.0 28 7433.0 29 12099.0 30 18486.0 31 27262.0 32 42149.0 33 71353.0 34 161570.0 35 686974.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.493471117552716 17.86952663550364 12.506119469423895 26.130882777519748 2 16.028276505845568 19.3595408108596 37.86707957135397 26.745103111940864 3 19.019768156847906 22.754665001221092 28.312606966105804 29.9129598758252 4 13.15561107030091 15.589776062998512 34.344632664743166 36.90998020195741 5 14.81667746179634 36.2469243533299 33.31776003150698 15.618638153366776 6 35.482161473415964 34.06386346963203 16.14232209737828 14.311652959573728 7 30.986205079148732 30.07893154278974 19.648809173318302 19.286054204743227 8 28.135518615083 33.986221489032886 18.467394042825937 19.410865853058176 9 26.86365606427269 15.192849923887097 18.53235787833712 39.41113613350309 10 16.742618689313595 27.437905480997838 30.91168489933501 24.907790930353553 11 36.441429744942134 21.82379452508347 21.703326669633316 20.031449060341075 12 24.178323315259938 23.640175643677704 28.63351033484851 23.547990706213845 13 29.741467101560776 19.902004032970353 24.787805718555042 25.56872314691383 14 23.196433070356896 19.044442792730614 25.44844834892433 32.31067578798816 15 25.049205520285028 27.18924747167123 22.204407308769344 25.557139699274394 16 25.397096597638708 26.28188235612096 23.39363506400362 24.927385982236714 17 24.14926816743101 26.182066699422084 25.163881651915464 24.50478348123144 18 24.303881045370566 25.92093501860114 25.659920575930684 24.11526336009761 19 25.541115930039837 25.42006890220771 25.314852586149478 23.723962581602976 20 25.465535731695425 24.866186530908134 25.566891289889444 24.101386447506993 21 25.497799142824046 24.672960345959304 25.29885323757674 24.53038727363991 22 25.6029908461805 24.30197661881094 25.35616688273014 24.738865652278417 23 24.83664925610134 24.735197560525926 25.53455197637749 24.893601206995246 24 24.73521837003402 24.778560313838145 25.386409356454188 25.09981195967365 25 24.88240342021918 24.693689023772222 25.580115777006192 24.843791779002412 26 24.61043192030542 25.108619582896942 25.56143847947063 24.719510017327007 27 24.897630589775222 25.12659828525205 25.27766676898781 24.698104355984917 28 25.125224071208553 24.628189002676788 25.438754834966787 24.807832091147873 29 24.682466596007156 25.294559410939094 25.347650571357416 24.67532342169633 30 24.96792783400663 25.089459382496177 25.098919344173677 24.843693439323516 31 24.74588738153477 24.840292753181114 25.440606665521187 24.973213199762924 32 24.846275771130927 25.159226446166112 25.31589484393974 24.678602938763216 33 24.708361447434594 25.12102336293881 25.28338531425532 24.887229875371276 34 25.052439738945182 24.93457702150005 25.331700051450312 24.681283188104455 35 24.87335418355921 24.968048959419285 25.614309432796635 24.544287424224873 36 24.80032974309769 25.017809602319787 25.369657843271636 24.812202811310883 37 25.0767903098448 24.83198801472675 25.314449320326123 24.776772355102334 38 24.779311190286123 25.05123262362193 25.380588651503288 24.788867534588658 39 25.026521575869083 25.10432463374162 25.07584832844088 24.793305461948417 40 25.17896443878142 24.845167767095255 25.168346268195684 24.80752152592764 41 24.68639926019667 25.048675082122614 25.457381671526935 24.807543986153785 42 24.959455859014508 24.863694459353532 25.322325920834672 24.85452376079729 43 24.894078533925278 24.84359147376845 25.337939915571734 24.92439007673454 44 24.644974326945075 25.161427960510117 25.305841911129427 24.887755801415373 45 24.856868432864996 24.967107009609677 25.34106869639504 24.834955861130283 46 24.987330261706113 24.88365560320986 25.096603737886525 25.032410397197502 47 24.775664415588427 25.26458857008267 25.335827667025757 24.623919347303147 48 24.76156459958298 25.25339794578732 25.15387288593714 24.83116456869256 49 24.919901729388993 24.946062176916058 25.03738241071903 25.096653682975923 50 24.635502940302022 25.391911563128648 25.26758099827405 24.70500449829528 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 46.0 1 60.5 2 75.0 3 153.5 4 232.0 5 238.0 6 244.0 7 187.0 8 130.0 9 186.0 10 242.0 11 425.0 12 608.0 13 1092.5 14 1577.0 15 1974.0 16 2371.0 17 2270.5 18 2170.0 19 2056.5 20 1943.0 21 2246.5 22 2550.0 23 3234.5 24 3919.0 25 4960.0 26 6001.0 27 7515.5 28 9030.0 29 10651.5 30 12273.0 31 14685.0 32 17097.0 33 19381.5 34 21666.0 35 24887.0 36 28108.0 37 31106.5 38 34105.0 39 38706.5 40 43308.0 41 47590.5 42 51873.0 43 55250.0 44 58627.0 45 63510.0 46 68393.0 47 71950.0 48 75507.0 49 78251.0 50 80995.0 51 84045.0 52 87095.0 53 86304.0 54 85513.0 55 81740.0 56 77967.0 57 73999.0 58 70031.0 59 64844.0 60 59657.0 61 52000.5 62 44344.0 63 38202.0 64 32060.0 65 27040.5 66 22021.0 67 18099.0 68 14177.0 69 11233.0 70 8289.0 71 6629.0 72 4969.0 73 3932.0 74 2895.0 75 2330.0 76 1765.0 77 1382.0 78 999.0 79 792.5 80 586.0 81 444.0 82 302.0 83 202.5 84 103.0 85 79.5 86 56.0 87 34.0 88 12.0 89 13.5 90 15.0 91 10.0 92 5.0 93 3.5 94 2.0 95 2.0 96 2.0 97 3.5 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032047538469112256 2 0.0046333790557752655 3 1.9305746065730273E-4 4 0.0 5 0.0 6 9.652873032865136E-5 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.8611492131460545E-4 17 0.0 18 2.895861909859541E-4 19 0.0 20 3.8611492131460545E-4 21 9.652873032865136E-5 22 0.0 23 0.0 24 0.0012548734942724677 25 3.8611492131460545E-4 26 5.791723819719082E-4 27 6.757011123005596E-4 28 0.0017375171459157244 29 6.757011123005596E-4 30 0.0015444596852584218 31 2.895861909859541E-4 32 0.0014479309549297705 33 3.8611492131460545E-4 34 9.652873032865137E-4 35 9.652873032865136E-5 36 2.895861909859541E-4 37 0.0022201607975589816 38 0.0 39 0.0011583447639438164 40 9.652873032865136E-5 41 9.652873032865137E-4 42 0.005116022707418523 43 0.005019493977089871 44 0.0048264365164325685 45 0.0025097469885449353 46 0.0027028044492022384 47 0.0012548734942724677 48 0.003957677943474706 49 0.004440321595117963 50 0.0012548734942724677 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1035961.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.91099862103565 #Duplication Level Percentage of deduplicated Percentage of total 1 66.75776251261287 34.65462117735673 2 16.80112333936834 17.443261810036 3 6.835645645949613 10.645355751023363 4 3.4009136702948926 7.061792993957579 5 1.858527500895702 4.823900926807681 6 1.153065734539271 3.5914076253378937 7 0.7544080966457096 2.74134543652715 8 0.4959244560291891 2.0595147002455274 9 0.3613819882727771 1.6883729905405729 >10 1.5318237460630415 13.143833828785157 >50 0.04156447185036466 1.4344112415290367 >100 0.0072974924637221154 0.5012080606671201 >500 5.613450145136433E-4 0.21097345718624314 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.895861909859541E-4 2 0.0 0.0 0.0 0.0 2.895861909859541E-4 3 0.0 0.0 0.0 0.0 2.895861909859541E-4 4 0.0 0.0 0.0 0.0 2.895861909859541E-4 5 0.0 0.0 0.0 0.0 3.8611492131460545E-4 6 0.0 0.0 0.0 0.0 3.8611492131460545E-4 7 0.0 0.0 0.0 0.0 3.8611492131460545E-4 8 0.0 0.0 0.0 0.0 3.8611492131460545E-4 9 0.0 0.0 0.0 0.0 3.8611492131460545E-4 10 0.0 0.0 0.0 0.0 3.8611492131460545E-4 11 0.0 0.0 0.0 0.0 3.8611492131460545E-4 12 0.0 0.0 0.0 0.0 9.652873032865136E-4 13 0.0 0.0 0.0 0.0 0.0011583447639438164 14 0.0 0.0 0.0 0.0 0.0011583447639438164 15 0.0 0.0 0.0 0.0 0.0013514022246011192 16 0.0 0.0 0.0 9.652873032865136E-5 0.0013514022246011192 17 0.0 0.0 0.0 9.652873032865136E-5 0.0013514022246011192 18 0.0 0.0 0.0 1.9305746065730273E-4 0.0015444596852584218 19 0.0 0.0 0.0 4.826436516432568E-4 0.0015444596852584218 20 0.0 0.0 0.0 6.757011123005596E-4 0.0019305746065730273 21 0.0 0.0 0.0 6.757011123005596E-4 0.00212363206723033 22 0.0 0.0 0.0 9.652873032865136E-4 0.00212363206723033 23 0.0 0.0 0.0 0.0011583447639438164 0.00212363206723033 24 0.0 0.0 0.0 0.0013514022246011192 0.00212363206723033 25 0.0 0.0 0.0 0.00212363206723033 0.00212363206723033 26 0.0 0.0 0.0 0.0027028044492022384 0.00212363206723033 27 0.0 0.0 0.0 0.003185448100845495 0.00212363206723033 28 0.0 0.0 0.0 0.0033785055615027978 0.00212363206723033 29 0.0 0.0 0.0 0.005791723819719082 0.00212363206723033 30 0.0 0.0 0.0 0.008784114459907275 0.00212363206723033 31 0.0 0.0 0.0 0.015348068122255568 0.00212363206723033 32 0.0 0.0 0.0 0.02249119416657577 0.0022201607975589816 33 0.0 0.0 0.0 0.030599607514182482 0.0022201607975589816 34 0.0 0.0 0.0 0.039769836895404365 0.0024132182582162843 35 0.0 0.0 0.0 0.0490365950069549 0.0024132182582162843 36 0.0 0.0 0.0 0.0629367321742807 0.0024132182582162843 37 0.0 0.0 0.0 0.08185636331869636 0.0024132182582162843 38 0.0 0.0 0.0 0.1099462238443339 0.0025097469885449358 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 490 0.0 32.33469 1 GATTGCG 30 0.0057416223 29.336487 40 GTATCAA 1250 0.0 28.519196 1 CCCTATA 90 4.0783198E-7 22.001303 2 TATCAAC 1885 0.0 18.674847 2 GTATAGG 145 6.2846084E-9 18.211493 1 TATAGGG 85 1.4299332E-4 18.118721 2 ATCAACG 1925 0.0 17.943054 3 AACTATC 75 0.001291024 17.599344 19 TCAACGC 1965 0.0 17.576952 4 CAACGCA 1970 0.0 17.42067 5 GTCTTAG 145 1.2451164E-7 16.693869 1 AACGCAG 2085 0.0 16.670841 6 CCTATAC 125 9.436597E-6 15.840175 3 AATAACG 85 0.002978379 15.530333 2 GTATGGA 225 4.2564352E-10 14.670367 1 GTAATAC 120 1.18064956E-4 14.666826 3 TAAGGTA 120 1.1811347E-4 14.66612 4 GTATTGG 200 2.1067535E-8 14.303609 1 AGGATAG 170 7.5905155E-7 14.234764 5 >>END_MODULE