##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062111_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 261142 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35444317650933 32.0 32.0 32.0 32.0 32.0 2 31.551033537309202 32.0 32.0 32.0 32.0 32.0 3 31.62879965689165 32.0 32.0 32.0 32.0 32.0 4 31.67811765246494 32.0 32.0 32.0 32.0 32.0 5 31.669777362507755 32.0 32.0 32.0 32.0 32.0 6 35.32540916436268 36.0 36.0 36.0 36.0 36.0 7 35.323253249190095 36.0 36.0 36.0 36.0 36.0 8 35.27948012958467 36.0 36.0 36.0 36.0 36.0 9 35.3491778419404 36.0 36.0 36.0 36.0 36.0 10 35.249335610510755 36.0 36.0 36.0 36.0 36.0 11 35.353187154881255 36.0 36.0 36.0 36.0 36.0 12 35.27262562130948 36.0 36.0 36.0 36.0 36.0 13 35.30702836004932 36.0 36.0 36.0 36.0 36.0 14 35.28172794877882 36.0 36.0 36.0 36.0 36.0 15 35.25977054629282 36.0 36.0 36.0 36.0 36.0 16 35.26844398832819 36.0 36.0 36.0 36.0 36.0 17 35.25082522152699 36.0 36.0 36.0 36.0 36.0 18 35.243652878510545 36.0 36.0 36.0 36.0 36.0 19 35.24180713941074 36.0 36.0 36.0 36.0 36.0 20 35.23913426411684 36.0 36.0 36.0 36.0 36.0 21 35.217747432431395 36.0 36.0 36.0 36.0 36.0 22 35.21232509515895 36.0 36.0 36.0 36.0 36.0 23 35.1747325210039 36.0 36.0 36.0 36.0 36.0 24 35.167996722089896 36.0 36.0 36.0 36.0 36.0 25 35.158120869105694 36.0 36.0 36.0 36.0 36.0 26 35.131361481492824 36.0 36.0 36.0 36.0 36.0 27 35.1020785626211 36.0 36.0 36.0 36.0 36.0 28 35.09104242136462 36.0 36.0 36.0 36.0 36.0 29 35.05447993811796 36.0 36.0 36.0 36.0 36.0 30 35.05176494014751 36.0 36.0 36.0 36.0 36.0 31 35.04940224092639 36.0 36.0 36.0 36.0 36.0 32 35.02790818788245 36.0 36.0 36.0 36.0 36.0 33 35.00812201790597 36.0 36.0 36.0 36.0 36.0 34 34.99606727374379 36.0 36.0 36.0 36.0 36.0 35 34.97600922103683 36.0 36.0 36.0 36.0 36.0 36 34.968963246050045 36.0 36.0 36.0 36.0 36.0 37 34.9472164569468 36.0 36.0 36.0 36.0 36.0 38 34.94023175130772 36.0 36.0 36.0 36.0 36.0 39 34.91618353233107 36.0 36.0 36.0 36.0 36.0 40 34.912354198099116 36.0 36.0 36.0 36.0 36.0 41 34.88949690206861 36.0 36.0 36.0 36.0 36.0 42 34.8554579500808 36.0 36.0 36.0 32.0 36.0 43 34.8656210031324 36.0 36.0 36.0 32.0 36.0 44 34.817107167747814 36.0 36.0 36.0 32.0 36.0 45 34.80802398694963 36.0 36.0 36.0 32.0 36.0 46 34.762722962985656 36.0 36.0 36.0 32.0 36.0 47 34.74183394475037 36.0 36.0 36.0 32.0 36.0 48 34.72648214381448 36.0 36.0 36.0 32.0 36.0 49 34.71915662742875 36.0 36.0 36.0 32.0 36.0 50 34.32835009305282 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 21 10.0 22 16.0 23 50.0 24 111.0 25 300.0 26 572.0 27 1117.0 28 1928.0 29 3036.0 30 4713.0 31 6605.0 32 10030.0 33 16432.0 34 38252.0 35 177970.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.09146766569369 17.969845319359212 12.461023389796747 26.47766362515035 2 16.085522914488575 19.837394637776068 37.239155493771136 26.837926953964224 3 18.18512533410941 23.338643343468306 28.75561954798539 29.720611774436893 4 13.108576942812721 16.059461901953725 34.86838578244787 35.96357537278569 5 15.002948587358603 36.2255018342511 32.893598119031026 15.877951459359277 6 34.89710578918749 34.55131690804237 16.5480849499506 14.003492352819539 7 30.58642424428089 30.248294031599666 20.270580756829617 18.894700967289825 8 28.14828713879805 33.126038706910414 19.09535808104403 19.630316073247506 9 27.57388700400548 14.315200159300304 18.52440434706022 39.58650848963399 10 16.648796440250898 26.599704375397295 30.945998728661035 25.805500455690773 11 37.05148922808281 21.020364399445512 22.263749224559817 19.664397147911863 12 24.841752156880766 23.42833947943831 28.341394112759005 23.388514250921915 13 29.48242718520958 19.535348584295136 25.021252804987327 25.96097142550796 14 23.880111203866093 19.298312795337402 24.791875684493494 32.02970031630301 15 25.321855542195433 27.171806909650687 21.854776328587512 25.651561219566364 16 25.800435783241877 25.772098384385327 23.405159704218825 25.02230612815397 17 24.397837192025797 25.648880685604002 24.9998085332884 24.953473589081803 18 25.09592482251036 24.929348783420515 25.83345459558401 24.141271798485114 19 25.945271155156963 24.583942835698586 25.146854967795303 24.32393104134915 20 26.222998303598438 24.213356003078797 24.755974741614683 24.80767095170808 21 26.724923604782074 23.975844559664857 24.49089001386219 24.80834182169088 22 26.43466007000023 23.949805086887594 24.790343950800715 24.825190892311465 23 24.837444761853707 24.258832359405993 25.233780854860573 25.669942023879727 24 25.266237521013714 24.55014379315231 25.092383749650573 25.091234936183408 25 25.383987960527072 24.112261192229486 25.169544422361867 25.33420642488158 26 24.99262850337557 25.027092643437836 25.423813189043464 24.556465664143126 27 25.357182518256423 24.458434332410462 24.88310912495548 25.301274024377634 28 25.048154062364773 24.550338705909837 25.145419524318278 25.25608770740711 29 25.1431219149808 24.746401369375164 25.05083460659184 25.0596421090522 30 25.038580690125258 24.73912560647313 25.119379951826794 25.102913751574818 31 25.549415832825943 24.462646616195848 24.71691538287745 25.27102216810076 32 25.417400628015624 24.71930765106839 24.344795894922264 25.51849582599372 33 24.852762098781504 24.55407402868937 25.116220293939694 25.476943578589427 34 25.45942613377448 24.46456129064375 25.1232093007226 24.952803274859175 35 25.721353598247692 24.5231503287496 25.359480127593905 24.396015945408802 36 24.85620849959026 24.734818604437432 24.900628776680886 25.508344119291422 37 25.53955732557249 24.592172780883818 24.71815884200046 25.150111051543234 38 25.069119482886705 24.505058550520406 25.102817624127873 25.323004342465016 39 25.414914719420384 24.401274421953143 24.721028728105445 25.462782130521028 40 25.873279671596293 24.387497989599527 25.038101875607904 24.70112046319627 41 24.91374391612194 24.911829241674038 25.084149941985363 25.090276900218655 42 25.89448127170862 24.95586472586346 24.65639588096305 24.49325812146487 43 25.448717703239343 24.30255846637537 25.04738964435747 25.201334186027808 44 24.954907690009996 24.775304349158088 24.88291317384761 25.386874786984308 45 25.197691650806657 24.93154986424854 24.87564094218022 24.995117542764582 46 25.145518044237487 24.525151645119784 24.967449911157406 25.361880399485326 47 25.31008152683799 24.423970192348197 25.209369650878262 25.05657862993555 48 25.661656294877933 25.15844901866922 24.259262805169936 24.920631881282908 49 25.10694030107955 25.1670643020446 24.355964722146695 25.370030674729154 50 25.437125198171085 25.15106954943363 24.51002917997381 24.901776072421477 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 45.0 1 29.5 2 14.0 3 31.0 4 48.0 5 50.0 6 52.0 7 39.0 8 26.0 9 42.0 10 58.0 11 81.5 12 105.0 13 208.0 14 311.0 15 409.0 16 507.0 17 481.0 18 455.0 19 420.5 20 386.0 21 485.0 22 584.0 23 664.0 24 744.0 25 946.0 26 1148.0 27 1511.0 28 1874.0 29 2252.0 30 2630.0 31 3188.5 32 3747.0 33 4381.0 34 5015.0 35 5966.0 36 6917.0 37 8071.0 38 9225.0 39 10073.5 40 10922.0 41 11987.5 42 13053.0 43 13777.0 44 14501.0 45 15828.5 46 17156.0 47 18347.5 48 19539.0 49 20231.5 50 20924.0 51 20727.0 52 20530.0 53 20228.5 54 19927.0 55 19736.5 56 19546.0 57 18982.0 58 18418.0 59 16845.0 60 15272.0 61 13399.5 62 11527.0 63 9923.5 64 8320.0 65 7027.5 66 5735.0 67 4853.0 68 3971.0 69 3494.0 70 3017.0 71 2369.5 72 1722.0 73 1509.5 74 1297.0 75 982.5 76 668.0 77 569.0 78 470.0 79 402.0 80 334.0 81 250.5 82 167.0 83 151.0 84 135.0 85 98.0 86 61.0 87 42.5 88 24.0 89 14.5 90 5.0 91 5.0 92 5.0 93 4.5 94 4.0 95 2.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03369814124116381 2 0.007275735040705823 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 3.829334231950433E-4 13 0.0 14 0.0 15 0.0 16 0.00114880026958513 17 0.0 18 0.0 19 0.0 20 3.829334231950433E-4 21 0.0 22 0.0 23 0.0 24 0.00114880026958513 25 3.829334231950433E-4 26 3.829334231950433E-4 27 3.829334231950433E-4 28 3.829334231950433E-4 29 3.829334231950433E-4 30 3.829334231950433E-4 31 3.829334231950433E-4 32 7.658668463900866E-4 33 0.0 34 3.829334231950433E-4 35 3.829334231950433E-4 36 0.0 37 7.658668463900866E-4 38 0.0 39 0.0015317336927801733 40 0.0 41 3.829334231950433E-4 42 0.0049781345015355635 43 0.0034464008087553896 44 0.0042122676551454765 45 0.00114880026958513 46 0.00229760053917026 47 3.829334231950433E-4 48 0.006509868194315736 49 0.0057440013479256495 50 0.0015317336927801733 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 261142.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.84478469230875 #Duplication Level Percentage of deduplicated Percentage of total 1 85.40307607782289 62.21168688949873 2 10.021021699131518 14.59958336140379 3 2.230939259310345 4.875368700182426 4 0.8110483165644305 2.363225599807816 5 0.4049618281635772 1.4749678590589756 6 0.2410305632532338 1.0534691690668632 7 0.147107930074374 0.7501231844959291 8 0.1087408642940051 0.6336963877401892 9 0.08942313516586238 0.5862608124901622 >10 0.4719340745143079 6.672816825605264 >50 0.05013465605985473 2.557202610670318 >100 0.020581595645624572 2.22159859997952 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 302 0.11564589380490307 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.829334231950433E-4 0.0 5 0.0 0.0 0.0 3.829334231950433E-4 0.0 6 0.0 0.0 0.0 3.829334231950433E-4 0.0 7 0.0 0.0 0.0 3.829334231950433E-4 0.0 8 0.0 0.0 0.0 3.829334231950433E-4 0.0 9 0.0 0.0 0.0 3.829334231950433E-4 0.0 10 0.0 0.0 0.0 3.829334231950433E-4 0.0 11 0.0 0.0 0.0 3.829334231950433E-4 0.0 12 0.0 0.0 0.0 3.829334231950433E-4 3.829334231950433E-4 13 0.0 0.0 0.0 3.829334231950433E-4 3.829334231950433E-4 14 0.0 0.0 0.0 3.829334231950433E-4 3.829334231950433E-4 15 0.0 0.0 0.0 3.829334231950433E-4 3.829334231950433E-4 16 0.0 0.0 0.0 3.829334231950433E-4 3.829334231950433E-4 17 0.0 0.0 0.0 3.829334231950433E-4 3.829334231950433E-4 18 0.0 0.0 0.0 3.829334231950433E-4 3.829334231950433E-4 19 0.0 0.0 0.0 3.829334231950433E-4 3.829334231950433E-4 20 0.0 0.0 0.0 3.829334231950433E-4 3.829334231950433E-4 21 0.0 0.0 0.0 7.658668463900866E-4 3.829334231950433E-4 22 0.0 0.0 0.0 7.658668463900866E-4 3.829334231950433E-4 23 0.0 0.0 0.0 7.658668463900866E-4 7.658668463900866E-4 24 0.0 0.0 0.0 7.658668463900866E-4 7.658668463900866E-4 25 0.0 0.0 0.0 7.658668463900866E-4 7.658668463900866E-4 26 0.0 0.0 0.0 7.658668463900866E-4 7.658668463900866E-4 27 0.0 0.0 0.0 7.658668463900866E-4 0.00114880026958513 28 0.0 0.0 0.0 7.658668463900866E-4 0.00114880026958513 29 0.0 0.0 0.0 0.002680533962365303 0.00114880026958513 30 0.0 0.0 0.0 0.0065098681943157365 0.00114880026958513 31 0.0 0.0 0.0 0.01263680296543643 0.00114880026958513 32 0.0 0.0 0.0 0.023741872238092685 0.00114880026958513 33 0.0 0.0 0.0 0.03331520781796877 0.00114880026958513 34 0.0 0.0 0.0 0.041356809705064675 0.00114880026958513 35 0.0 0.0 0.0 0.05093014528494076 0.00114880026958513 36 0.0 0.0 0.0 0.06739628248232762 0.00114880026958513 37 0.0 0.0 0.0 0.09037228787403022 0.00114880026958513 38 0.0 0.0 0.0 0.12253869542241386 0.00114880026958513 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCATATA 25 0.0023455147 35.211956 1 TATACTG 45 4.0586834E-5 29.332058 5 CGTATTG 80 4.285539E-9 27.498802 27 CGCTAGA 80 4.285539E-9 27.498802 37 CCTATTC 50 8.319326E-5 26.398851 3 TTCGTAT 85 8.1599865E-9 25.886183 25 CCGCTAG 85 8.176357E-9 25.881227 36 TATTGCG 85 8.176357E-9 25.881227 29 GTATCAA 360 0.0 24.452745 1 GCCGCTA 90 1.5017577E-8 24.443382 35 TACGCTA 45 0.001395637 24.443382 9 CGCTATT 45 0.001395637 24.443382 11 TCGTATT 90 1.5017577E-8 24.443382 26 CGGTCCA 45 0.001395637 24.443382 10 GGACGGC 95 2.6660928E-8 23.156887 10 ATTGCGC 95 2.6660928E-8 23.156887 30 GGTATCA 200 0.0 23.107845 1 GTATTAT 50 0.0025699986 22.007473 1 ATTCGTA 100 4.5818524E-8 22.003258 24 GCGCCGC 120 5.9299055E-10 21.999043 33 >>END_MODULE