Basic Statistics
Measure | Value |
---|---|
Filename | SRR4062110_1.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1257636 |
Sequences flagged as poor quality | 0 |
Sequence length | 50 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TAACACG | 30 | 0.0057456577 | 29.332752 | 4 |
GGTATCA | 675 | 0.0 | 24.450762 | 1 |
ATCGATT | 95 | 2.6861017E-8 | 23.157436 | 29 |
GTATCAA | 1265 | 0.0 | 22.7885 | 1 |
CTATAGG | 135 | 2.590241E-9 | 19.560612 | 1 |
GTTATAG | 195 | 0.0 | 19.184444 | 1 |
TAGGACG | 145 | 6.3082553E-9 | 18.206535 | 4 |
GTATAGA | 170 | 1.2551027E-10 | 18.12233 | 1 |
TTGCGAG | 75 | 0.0012910818 | 17.599651 | 11 |
ATTGCGA | 75 | 0.0012910818 | 17.599651 | 10 |
GATATAC | 340 | 0.0 | 17.475105 | 1 |
ACCGTCG | 180 | 2.8558134E-10 | 17.110771 | 8 |
GCATATA | 250 | 0.0 | 16.724321 | 1 |
CCTAATA | 135 | 1.0853037E-6 | 16.296621 | 2 |
ACGGACC | 360 | 0.0 | 15.888573 | 8 |
GACGGAC | 305 | 0.0 | 15.868537 | 7 |
CCTACAC | 250 | 0.0 | 15.840314 | 3 |
CGGATCG | 140 | 1.5865808E-6 | 15.713972 | 26 |
TACCGTC | 225 | 2.5465852E-11 | 15.644133 | 7 |
CGTCGTA | 185 | 7.568815E-9 | 15.459151 | 10 |