##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062110_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1257636 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.221550591745146 32.0 32.0 32.0 32.0 32.0 2 31.37157571825234 32.0 32.0 32.0 32.0 32.0 3 31.525007235797958 32.0 32.0 32.0 32.0 32.0 4 31.6125031408134 32.0 32.0 32.0 32.0 32.0 5 31.587014843722667 32.0 32.0 32.0 32.0 32.0 6 35.2047150367833 36.0 36.0 36.0 36.0 36.0 7 35.21605933672382 36.0 36.0 36.0 36.0 36.0 8 35.1591064505151 36.0 36.0 36.0 36.0 36.0 9 35.260308229090136 36.0 36.0 36.0 36.0 36.0 10 35.128048974425035 36.0 36.0 36.0 36.0 36.0 11 35.25038882474738 36.0 36.0 36.0 36.0 36.0 12 35.170462677595104 36.0 36.0 36.0 36.0 36.0 13 35.20359150024331 36.0 36.0 36.0 36.0 36.0 14 35.17347467788772 36.0 36.0 36.0 36.0 36.0 15 35.14403929276833 36.0 36.0 36.0 36.0 36.0 16 35.1609774211298 36.0 36.0 36.0 36.0 36.0 17 35.144902817667436 36.0 36.0 36.0 36.0 36.0 18 35.13523547353925 36.0 36.0 36.0 36.0 36.0 19 35.12956451628293 36.0 36.0 36.0 36.0 36.0 20 35.12963607911987 36.0 36.0 36.0 36.0 36.0 21 35.11857882566975 36.0 36.0 36.0 36.0 36.0 22 35.09673625754988 36.0 36.0 36.0 36.0 36.0 23 35.06860411120547 36.0 36.0 36.0 36.0 36.0 24 35.04868737854196 36.0 36.0 36.0 36.0 36.0 25 35.033075548091816 36.0 36.0 36.0 36.0 36.0 26 34.98426889815495 36.0 36.0 36.0 36.0 36.0 27 34.97951235492623 36.0 36.0 36.0 36.0 36.0 28 34.95207516324278 36.0 36.0 36.0 36.0 36.0 29 34.936466513363165 36.0 36.0 36.0 32.0 36.0 30 34.91337318588209 36.0 36.0 36.0 32.0 36.0 31 34.910807260606404 36.0 36.0 36.0 32.0 36.0 32 34.883300096371286 36.0 36.0 36.0 32.0 36.0 33 34.86657268080749 36.0 36.0 36.0 32.0 36.0 34 34.849810278967844 36.0 36.0 36.0 32.0 36.0 35 34.84532408423423 36.0 36.0 36.0 32.0 36.0 36 34.810754463135595 36.0 36.0 36.0 32.0 36.0 37 34.802325156086496 36.0 36.0 36.0 32.0 36.0 38 34.785441097424055 36.0 36.0 36.0 32.0 36.0 39 34.763581036166265 36.0 36.0 36.0 32.0 36.0 40 34.75452992757841 36.0 36.0 36.0 32.0 36.0 41 34.72996638136949 36.0 36.0 36.0 32.0 36.0 42 34.708119042393825 36.0 36.0 36.0 32.0 36.0 43 34.69074040501385 36.0 36.0 36.0 32.0 36.0 44 34.6574644809786 36.0 36.0 36.0 32.0 36.0 45 34.64173019856302 36.0 36.0 36.0 32.0 36.0 46 34.6163468602998 36.0 36.0 36.0 32.0 36.0 47 34.592471907610786 36.0 36.0 36.0 32.0 36.0 48 34.56283853197586 36.0 36.0 36.0 32.0 36.0 49 34.54027874520131 36.0 36.0 36.0 32.0 36.0 50 34.113775369025696 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 7.0 21 27.0 22 81.0 23 209.0 24 599.0 25 1434.0 26 3146.0 27 5958.0 28 10334.0 29 16739.0 30 25361.0 31 37806.0 32 57196.0 33 96254.0 34 215559.0 35 786923.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.82256886834323 17.653871055490775 12.275562455955598 26.247997620210395 2 16.116363266244107 19.37261993083536 37.54062369044012 26.970393112480405 3 19.210022025556007 22.345204869476714 28.093556928508384 30.351216176458895 4 13.055685428852225 15.739927928271774 34.41011548651597 36.794271156360026 5 15.009350877360381 36.08738935590266 33.11951947940421 15.783740287332742 6 35.73495945561268 34.203194252063795 16.109694871480894 13.952151420842629 7 31.408770105181468 29.533903291572443 19.361723105890736 19.695603497355354 8 28.09986355352423 34.061922527663015 18.30179797652103 19.53641594229173 9 26.758457932183877 14.85747863451746 18.55854953261516 39.825513900683504 10 17.033413536847764 26.904329876577766 30.61526644476851 25.446990141805966 11 37.21895683647733 21.389416333501902 21.418916125174533 19.972710704846236 12 24.25574649580642 23.381487171168764 28.576153990502817 23.786612342522 13 29.993893304580975 19.376910330175026 24.677251605392975 25.95194475985102 14 23.448279152314342 19.21334949063163 24.976702320862316 32.361669036191714 15 25.34254744616089 27.023638000184473 21.82030412615415 25.813510427500486 16 25.68469949874049 25.943996335971093 23.56690987506679 24.804394290221623 17 24.312758222569965 25.907575800947175 24.955869583885956 24.823796392596904 18 24.726013509484073 25.498495191371106 25.51169456956907 24.263796729575752 19 25.652255501591874 25.094224401973225 24.93702470349131 24.316495392943587 20 25.79132594804856 24.825863763441884 24.893848458536493 24.48896182997306 21 26.10948327614928 24.54782190381152 24.601414559868324 24.741280260170875 22 25.908291429316595 24.39600965621213 25.020037594343673 24.675661320127602 23 25.117144481506955 24.55879488086766 25.021886318367415 25.30217431925797 24 24.96358200410299 24.965728916524867 25.089534199519726 24.98115487985242 25 25.269195966394037 24.476596529673973 25.14165488528459 25.1125526186474 26 24.719234243403477 25.231625785603416 25.35399862598916 24.695141345003943 27 25.110366499473614 24.816877486824403 25.102176478259068 24.970579535442912 28 25.08019153730795 24.86804377177735 25.093470651567173 24.958294039347525 29 24.849439024196307 25.029539689733866 25.05649515358253 25.0645261324873 30 25.026240207631606 25.103847609596603 25.026717302315816 24.843194880455975 31 25.237033526607235 24.74547322419666 24.859894976893006 25.1575982723031 32 25.119888679057752 24.992982804890172 24.815584931915318 25.07154358413677 33 25.04355404160037 24.732095929416612 24.986860236650916 25.237489792332102 34 25.224788967131673 24.94362384941763 25.100427472758152 24.731159710692545 35 25.32119837727033 24.760939987309502 25.387354349516634 24.53050728590353 36 24.67985493383205 25.01636009869334 25.16998202178219 25.133802945692423 37 25.266298349570455 24.89058628575427 24.93113933391221 24.911976030763064 38 25.100347000244906 24.909512768400397 25.008428511906466 24.981711719448235 39 25.433952542329752 24.735016610661674 24.8400557876507 24.99097505935787 40 25.612459586811426 24.790121768336416 24.805229502383046 24.792189142469113 41 24.85573906841272 24.933743739151108 25.301264216371123 24.909252976065048 42 25.43109172264133 25.02276227910649 25.017832108610065 24.52831388964211 43 25.231079473526847 24.49020973682704 25.033556620037277 25.245154169608835 44 24.657557121523684 25.126154795472583 25.1137500377709 25.102538045232837 45 24.959148475313754 25.10951389269905 24.967020593939424 24.964317038047778 46 24.930661798149497 24.882395412228334 24.875477495300586 25.311465294321582 47 24.967895580125873 25.00423420522179 25.181394942013256 24.846475272639083 48 25.237900227821225 25.018030877131597 24.634352896271764 25.10971599877541 49 25.103074051897632 25.174400898225258 24.65467707704651 25.06784797283059 50 25.20562846292326 25.19155412497376 24.625718029783524 24.97709938231945 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 9.5 2 11.0 3 55.5 4 100.0 5 115.5 6 131.0 7 111.0 8 91.0 9 114.0 10 137.0 11 252.0 12 367.0 13 711.0 14 1055.0 15 1431.5 16 1808.0 17 1827.0 18 1846.0 19 1954.5 20 2063.0 21 2458.0 22 2853.0 23 3587.0 24 4321.0 25 5763.5 26 7206.0 27 9283.0 28 11360.0 29 13495.0 30 15630.0 31 17769.0 32 19908.0 33 22982.0 34 26056.0 35 30633.0 36 35210.0 37 40325.0 38 45440.0 39 49649.0 40 53858.0 41 58011.5 42 62165.0 43 65465.0 44 68765.0 45 74300.5 46 79836.0 47 84437.5 48 89039.0 49 93141.0 50 97243.0 51 97340.5 52 97438.0 53 96960.0 54 96482.0 55 95184.5 56 93887.0 57 90558.0 58 87229.0 59 80486.5 60 73744.0 61 65258.5 62 56773.0 63 49478.5 64 42184.0 65 35126.5 66 28069.0 67 23840.0 68 19611.0 69 16532.5 70 13454.0 71 10577.5 72 7701.0 73 6700.5 74 5700.0 75 4527.0 76 3354.0 77 2794.0 78 2234.0 79 1848.5 80 1463.0 81 1177.0 82 891.0 83 689.5 84 488.0 85 367.0 86 246.0 87 169.0 88 92.0 89 56.5 90 21.0 91 17.5 92 14.0 93 16.5 94 19.0 95 18.0 96 17.0 97 15.5 98 14.0 99 9.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030374448568584234 2 0.004532313006307071 3 4.770855796112707E-4 4 0.0 5 0.0 6 1.590285265370902E-4 7 0.0 8 0.0 9 0.0 10 1.590285265370902E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.180570530741804E-4 17 0.0 18 7.95142632685451E-5 19 0.0 20 0.0 21 7.95142632685451E-5 22 0.0 23 7.95142632685451E-5 24 0.0012722282122967217 25 1.590285265370902E-4 26 3.180570530741804E-4 27 6.361141061483608E-4 28 0.0017493137919079925 29 4.770855796112707E-4 30 0.0019083423184450827 31 6.361141061483608E-4 32 8.746568959539962E-4 33 2.3854278980563534E-4 34 9.541711592225414E-4 35 1.590285265370902E-4 36 2.3854278980563534E-4 37 0.0019083423184450827 38 0.0 39 7.951426326854511E-4 40 1.590285265370902E-4 41 0.001510771002102357 42 0.005804541218603793 43 0.004770855796112707 44 0.004293770216501435 45 0.0026239706878619885 46 0.0025444564245934434 47 0.0016697995286394471 48 0.0056455126920667035 49 0.00357814184708453 50 0.0022263993715192633 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1257636.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.46959475410611 #Duplication Level Percentage of deduplicated Percentage of total 1 69.37145663507206 37.092636737793484 2 16.366415799092824 17.502112407093858 3 6.235057594559319 10.001580085487953 4 2.9460032990532112 6.300864101785394 5 1.5648395131658797 4.183566731209614 6 0.9415597407392247 3.0206890664464527 7 0.5898452929169427 2.2077152145920156 8 0.40306924731452703 1.7241559449400263 9 0.27654446205155875 1.3308048285650207 >10 1.214880302723833 10.970812541446644 >50 0.05950649039536092 2.2478289381685865 >100 0.02947505331243049 2.984990214873247 >500 0.0013465696028258092 0.4322431875976661 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.590285265370902E-4 2 0.0 0.0 0.0 0.0 1.590285265370902E-4 3 0.0 0.0 0.0 0.0 1.590285265370902E-4 4 0.0 0.0 0.0 0.0 1.590285265370902E-4 5 0.0 0.0 0.0 0.0 1.590285265370902E-4 6 0.0 0.0 0.0 0.0 2.3854278980563534E-4 7 0.0 0.0 0.0 0.0 2.3854278980563534E-4 8 0.0 0.0 0.0 0.0 2.3854278980563534E-4 9 0.0 0.0 0.0 0.0 2.3854278980563534E-4 10 0.0 0.0 0.0 0.0 2.3854278980563534E-4 11 0.0 0.0 0.0 0.0 3.9757131634272555E-4 12 0.0 0.0 0.0 0.0 0.0011131996857596316 13 0.0 0.0 0.0 0.0 0.0013517424755652668 14 0.0 0.0 0.0 0.0 0.001431256738833812 15 0.0 0.0 0.0 1.590285265370902E-4 0.001510771002102357 16 0.0 0.0 0.0 1.590285265370902E-4 0.001510771002102357 17 0.0 0.0 0.0 3.180570530741804E-4 0.001510771002102357 18 0.0 0.0 0.0 3.9757131634272555E-4 0.0018288280551765376 19 0.0 0.0 0.0 6.361141061483608E-4 0.0018288280551765376 20 0.0 0.0 0.0 7.951426326854511E-4 0.0018288280551765376 21 0.0 0.0 0.0 9.541711592225414E-4 0.0018288280551765376 22 0.0 0.0 0.0 0.0012722282122967217 0.001987856581713628 23 0.0 0.0 0.0 0.0017493137919079925 0.002067370844982173 24 0.0 0.0 0.0 0.0026239706878619885 0.002067370844982173 25 0.0 0.0 0.0 0.00357814184708453 0.002146885108250718 26 0.0 0.0 0.0 0.004532313006307072 0.0026239706878619885 27 0.0 0.0 0.0 0.005088912849186887 0.0026239706878619885 28 0.0 0.0 0.0 0.006281626798215064 0.0026239706878619885 29 0.0 0.0 0.0 0.007712883537048876 0.0026239706878619885 30 0.0 0.0 0.0 0.01073442554125359 0.0026239706878619885 31 0.0 0.0 0.0 0.015982366916977568 0.0026239706878619885 32 0.0 0.0 0.0 0.020753222713090273 0.0026239706878619885 33 0.0 0.0 0.0 0.025921649825545706 0.0027034849511305336 34 0.0 0.0 0.0 0.03435016173201149 0.002862513477667624 35 0.0 0.0 0.0 0.041426931162912004 0.002862513477667624 36 0.0 0.0 0.0 0.05255892802050832 0.002862513477667624 37 0.0 0.0 0.0 0.06647392409250372 0.002862513477667624 38 0.0 0.0 0.0 0.08492123317080617 0.003021542004204714 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACACG 30 0.0057456577 29.332752 4 GGTATCA 675 0.0 24.450762 1 ATCGATT 95 2.6861017E-8 23.157436 29 GTATCAA 1265 0.0 22.7885 1 CTATAGG 135 2.590241E-9 19.560612 1 GTTATAG 195 0.0 19.184444 1 TAGGACG 145 6.3082553E-9 18.206535 4 GTATAGA 170 1.2551027E-10 18.12233 1 TTGCGAG 75 0.0012910818 17.599651 11 ATTGCGA 75 0.0012910818 17.599651 10 GATATAC 340 0.0 17.475105 1 ACCGTCG 180 2.8558134E-10 17.110771 8 GCATATA 250 0.0 16.724321 1 CCTAATA 135 1.0853037E-6 16.296621 2 ACGGACC 360 0.0 15.888573 8 GACGGAC 305 0.0 15.868537 7 CCTACAC 250 0.0 15.840314 3 CGGATCG 140 1.5865808E-6 15.713972 26 TACCGTC 225 2.5465852E-11 15.644133 7 CGTCGTA 185 7.568815E-9 15.459151 10 >>END_MODULE