##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062106_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1132481 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.286638804536235 32.0 32.0 32.0 32.0 32.0 2 31.440317320996996 32.0 32.0 32.0 32.0 32.0 3 31.56842896260511 32.0 32.0 32.0 32.0 32.0 4 31.643268187280846 32.0 32.0 32.0 32.0 32.0 5 31.620764498477236 32.0 32.0 32.0 32.0 32.0 6 35.25488109734292 36.0 36.0 36.0 36.0 36.0 7 35.25055961203764 36.0 36.0 36.0 36.0 36.0 8 35.21016953043804 36.0 36.0 36.0 36.0 36.0 9 35.293309998136834 36.0 36.0 36.0 36.0 36.0 10 35.16748537061549 36.0 36.0 36.0 36.0 36.0 11 35.29287290471098 36.0 36.0 36.0 36.0 36.0 12 35.20172965374253 36.0 36.0 36.0 36.0 36.0 13 35.23823975854783 36.0 36.0 36.0 36.0 36.0 14 35.209940829029364 36.0 36.0 36.0 36.0 36.0 15 35.1844216370959 36.0 36.0 36.0 36.0 36.0 16 35.19724392727119 36.0 36.0 36.0 36.0 36.0 17 35.17266426544904 36.0 36.0 36.0 36.0 36.0 18 35.17130618526933 36.0 36.0 36.0 36.0 36.0 19 35.1691374954635 36.0 36.0 36.0 36.0 36.0 20 35.163330775527356 36.0 36.0 36.0 36.0 36.0 21 35.15923622559672 36.0 36.0 36.0 36.0 36.0 22 35.137498112551114 36.0 36.0 36.0 36.0 36.0 23 35.10257390631719 36.0 36.0 36.0 36.0 36.0 24 35.08928626617136 36.0 36.0 36.0 36.0 36.0 25 35.06910314610135 36.0 36.0 36.0 36.0 36.0 26 35.026621197176816 36.0 36.0 36.0 36.0 36.0 27 35.01740338248501 36.0 36.0 36.0 36.0 36.0 28 35.000470648072685 36.0 36.0 36.0 36.0 36.0 29 34.972969965942035 36.0 36.0 36.0 36.0 36.0 30 34.95388266999623 36.0 36.0 36.0 36.0 36.0 31 34.95575643211674 36.0 36.0 36.0 36.0 36.0 32 34.932375024393345 36.0 36.0 36.0 32.0 36.0 33 34.91082499397341 36.0 36.0 36.0 32.0 36.0 34 34.90002304674427 36.0 36.0 36.0 32.0 36.0 35 34.88279891671472 36.0 36.0 36.0 32.0 36.0 36 34.86356945502838 36.0 36.0 36.0 32.0 36.0 37 34.848516663855726 36.0 36.0 36.0 32.0 36.0 38 34.83039980361701 36.0 36.0 36.0 32.0 36.0 39 34.815055616827124 36.0 36.0 36.0 32.0 36.0 40 34.80445411446196 36.0 36.0 36.0 32.0 36.0 41 34.781374698560064 36.0 36.0 36.0 32.0 36.0 42 34.750220091992716 36.0 36.0 36.0 32.0 36.0 43 34.75666699926975 36.0 36.0 36.0 32.0 36.0 44 34.696540604213226 36.0 36.0 36.0 32.0 36.0 45 34.679021546498355 36.0 36.0 36.0 32.0 36.0 46 34.66024948762937 36.0 36.0 36.0 32.0 36.0 47 34.64147036462422 36.0 36.0 36.0 32.0 36.0 48 34.617552965568514 36.0 36.0 36.0 32.0 36.0 49 34.60301762237071 36.0 36.0 36.0 32.0 36.0 50 34.19088532169635 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 17.0 21 42.0 22 89.0 23 227.0 24 556.0 25 1261.0 26 2669.0 27 5165.0 28 8969.0 29 14512.0 30 21538.0 31 31928.0 32 48554.0 33 81964.0 34 186643.0 35 728345.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.67875080159489 17.867218788147525 12.113224946516175 26.34080546374141 2 16.109445575242727 20.04291637047601 36.891653825605886 26.955984228675376 3 18.23821898684214 23.423745605878786 28.647330325772046 29.69070508150703 4 12.52277080145274 16.008127288669744 35.654726216157265 35.814375693720244 5 14.776861401525853 36.440025430912684 33.19581802769144 15.587295139870019 6 34.78392554393896 35.23947442780446 16.451504662333992 13.525095365922576 7 30.767403603239256 30.221699083693238 20.266918385385715 18.74397892768179 8 28.263432234183178 32.997374790393835 19.125089074342085 19.614103901080902 9 27.35551413224593 14.122532740063631 18.663889283793726 39.858063843896716 10 16.250971319581804 26.629079542243574 31.1854513987002 25.934497739474427 11 37.44689756384434 21.113378502597392 22.07180517818842 19.367918755369846 12 24.50469367698001 23.5875921980148 28.569309330575965 23.33840479442922 13 29.272544086832365 19.580460952545785 25.080509076973478 26.066485883648376 14 23.65761544785299 19.571719084028782 24.978079102430858 31.79258636568737 15 25.2680618924291 27.18809410489006 21.96098654193757 25.58285746074327 16 25.83984119751765 25.943066343127803 23.487120256853125 24.729972202501422 17 24.155372143108803 26.073726623228115 24.99194246967499 24.778958763988093 18 25.00348793879595 25.0773969203708 25.790084363967736 24.129030776865516 19 25.761491804277508 24.96607007093276 25.243337415815365 24.029100708974365 20 25.87939742865216 24.388775077705567 24.805736083639445 24.926091410002826 21 26.654840125353097 24.332593659407973 24.47705524419394 24.53551097104499 22 26.008648268712676 24.368532452200082 24.971897983277426 24.65092129580982 23 24.453588584345862 24.371644532353773 25.404157247810115 25.77060963549025 24 24.83191607724708 24.92604660609111 25.27360548182292 24.968431834838892 25 24.987637750777054 24.324491381746256 25.431177592540266 25.25669327493642 26 24.753084621002003 25.21402276257359 25.527937531402518 24.504955085021894 27 25.238615381762536 24.8424021453971 24.910659963919606 25.00832250892076 28 24.770411316956007 24.661886512547902 25.531497801246843 25.036204369249244 29 24.710655864367865 24.920550122519263 25.277555795933687 25.091238217179185 30 24.593897244258578 25.047153483706442 25.664122380067678 24.694826891967306 31 25.2931406112442 24.79962065454751 24.660809888412743 25.246428845795542 32 25.15477190184667 24.77445378388712 24.66125020199157 25.40952411227464 33 24.70950896219709 24.514715063149072 25.135123918412617 25.64065205624122 34 25.16596348891546 24.77204855193655 25.45930252066707 24.602685438480922 35 25.911231829669095 24.401798533834654 25.265568072845568 24.421401563650686 36 24.661296147654834 25.051678662474092 25.124439393578157 25.162585796292912 37 25.749225806622523 24.91167528647583 24.729683549836682 24.60941535706496 38 24.959734388245266 24.693681124611473 25.234617829895452 25.11196665724781 39 25.47338918754724 24.612264144279063 24.70136126985921 25.212985398314487 40 25.702352359423564 24.696241876236225 25.206537863803334 24.394867900536873 41 24.73990389115435 25.11130576988625 25.378951774269602 24.7698385646898 42 25.715842448872184 25.29867794882935 24.993575631376352 23.991903970922117 43 25.306111636039315 24.274789611719928 25.365011523891102 25.05408722834965 44 24.806854597650908 24.968894516869373 24.942049756410288 25.28220112906943 45 25.097067531804683 25.165944197538277 24.90606723952037 24.83092103113667 46 24.814143381791308 25.044526998328415 24.963729371217855 25.177600248662422 47 25.035056178187816 24.79593242369762 25.33855261252415 24.83045878559041 48 25.803098833831083 25.28174026382298 24.396296093519577 24.51886480882636 49 25.03951679132485 25.36562966364367 24.62165431858923 24.97319922644225 50 25.191839344152278 25.474498833510822 24.411324746701425 24.922337075635475 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 341.0 1 189.0 2 37.0 3 114.5 4 192.0 5 182.5 6 173.0 7 127.0 8 81.0 9 139.0 10 197.0 11 319.5 12 442.0 13 880.0 14 1318.0 15 1622.0 16 1926.0 17 2036.0 18 2146.0 19 2107.5 20 2069.0 21 2573.0 22 3077.0 23 3787.5 24 4498.0 25 5740.5 26 6983.0 27 8753.0 28 10523.0 29 12348.5 30 14174.0 31 16176.0 32 18178.0 33 20965.0 34 23752.0 35 27270.5 36 30789.0 37 36363.0 38 41937.0 39 45763.5 40 49590.0 41 53994.0 42 58398.0 43 60095.0 44 61792.0 45 67121.0 46 72450.0 47 77728.0 48 83006.0 49 85581.5 50 88157.0 51 85930.0 52 83703.0 53 82621.0 54 81539.0 55 82667.5 56 83796.0 57 81708.0 58 79620.0 59 71988.5 60 64357.0 61 56625.5 62 48894.0 63 42247.0 64 35600.0 65 29902.5 66 24205.0 67 20930.0 68 17655.0 69 15825.0 70 13995.0 71 11015.0 72 8035.0 73 7095.0 74 6155.0 75 4463.5 76 2772.0 77 2511.0 78 2250.0 79 1910.0 80 1570.0 81 1252.0 82 934.0 83 788.0 84 642.0 85 486.0 86 330.0 87 226.5 88 123.0 89 73.5 90 24.0 91 19.0 92 14.0 93 14.0 94 14.0 95 14.0 96 14.0 97 12.5 98 11.0 99 7.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03205351789566448 2 0.004061878300828005 3 1.7660340438382631E-4 4 0.0 5 8.830170219191316E-5 6 8.830170219191316E-5 7 0.0 8 0.0 9 0.0 10 8.830170219191316E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.4150851095956574E-4 17 0.0 18 6.181119153433921E-4 19 0.0 20 8.830170219191316E-5 21 0.0 22 0.0 23 8.830170219191316E-5 24 9.713187241110448E-4 25 8.830170219191316E-5 26 7.064136175353053E-4 27 8.830170219191315E-4 28 0.0018543357460301761 29 5.298102131514789E-4 30 7.947153197272183E-4 31 3.5320680876765263E-4 32 7.064136175353053E-4 33 1.7660340438382631E-4 34 2.6490510657573946E-4 35 2.6490510657573946E-4 36 1.7660340438382631E-4 37 0.0010596204263029578 38 8.830170219191316E-5 39 7.947153197272183E-4 40 8.830170219191316E-5 41 0.0013245255328786973 42 0.0065343259622015724 43 0.004503386811787571 44 0.003885274896444179 45 0.0019426374482220895 46 0.0019426374482220895 47 0.001147922128494871 48 0.004856593620555224 49 0.004503386811787571 50 0.0020309391504140027 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1132481.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.0288100413711 #Duplication Level Percentage of deduplicated Percentage of total 1 78.66270005367416 45.6470287875601 2 13.293563111125287 15.428192970969349 3 3.7525334845395117 6.53265158244683 4 1.4618315598585014 3.3931338359804073 5 0.7568857724067395 2.1960590355003564 6 0.45052630557072754 1.5686103242762677 7 0.28384897244388735 1.1529992671669305 8 0.20684276480667008 0.9602271605918606 9 0.15429102443653053 0.805799209330438 >10 0.8301936070482077 8.75073184053021 >50 0.07578449949276067 3.083574336740581 >100 0.06380715450322937 7.391097973870211 >500 0.006120587313881914 2.368453802923257 >1k 0.0010711027799293346 0.7214398721133487 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1293 0.11417410093414371 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1232 0.108787697100437 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1231 0.10869939539824508 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.4150851095956574E-4 2 0.0 0.0 0.0 0.0 4.4150851095956574E-4 3 0.0 0.0 0.0 0.0 4.4150851095956574E-4 4 0.0 0.0 0.0 0.0 4.4150851095956574E-4 5 0.0 0.0 0.0 0.0 4.4150851095956574E-4 6 0.0 0.0 0.0 0.0 4.4150851095956574E-4 7 0.0 0.0 0.0 0.0 4.4150851095956574E-4 8 0.0 0.0 0.0 0.0 4.4150851095956574E-4 9 0.0 0.0 0.0 0.0 4.4150851095956574E-4 10 0.0 0.0 0.0 8.830170219191316E-5 4.4150851095956574E-4 11 0.0 0.0 0.0 8.830170219191316E-5 4.4150851095956574E-4 12 0.0 0.0 0.0 8.830170219191316E-5 6.181119153433921E-4 13 0.0 0.0 0.0 8.830170219191316E-5 6.181119153433921E-4 14 0.0 0.0 0.0 8.830170219191316E-5 6.181119153433921E-4 15 0.0 0.0 0.0 1.7660340438382631E-4 6.181119153433921E-4 16 0.0 0.0 0.0 2.6490510657573946E-4 6.181119153433921E-4 17 0.0 0.0 0.0 2.6490510657573946E-4 6.181119153433921E-4 18 0.0 0.0 0.0 2.6490510657573946E-4 7.947153197272184E-4 19 0.0 0.0 0.0 2.6490510657573946E-4 7.947153197272184E-4 20 0.0 0.0 0.0 4.4150851095956574E-4 8.830170219191315E-4 21 0.0 0.0 0.0 4.4150851095956574E-4 8.830170219191315E-4 22 0.0 0.0 0.0 5.298102131514789E-4 8.830170219191315E-4 23 0.0 0.0 0.0 7.064136175353053E-4 8.830170219191315E-4 24 0.0 0.0 0.0 9.713187241110447E-4 9.713187241110447E-4 25 0.0 0.0 0.0 0.0012362238306867842 9.713187241110447E-4 26 0.0 0.0 0.0 0.00167773234164635 9.713187241110447E-4 27 0.0 0.0 0.0 0.0021192408526059157 0.0010596204263029578 28 0.0 8.830170219191316E-5 0.0 0.0032671629811007867 0.0010596204263029578 29 0.0 8.830170219191316E-5 0.0 0.004150180003019918 0.0010596204263029578 30 0.0 1.7660340438382631E-4 0.0 0.005739610642474355 0.0010596204263029578 31 0.0 1.7660340438382631E-4 0.0 0.010154695752070012 0.0010596204263029578 32 0.0 1.7660340438382631E-4 0.0 0.014393177457281844 0.0010596204263029578 33 0.0 1.7660340438382631E-4 0.0 0.019956184695372373 0.0010596204263029578 34 0.0 1.7660340438382631E-4 0.0 0.025607493635654816 0.0010596204263029578 35 0.0 1.7660340438382631E-4 0.0 0.03143540598032108 0.0010596204263029578 36 0.0 1.7660340438382631E-4 0.0 0.03955916258197709 0.0010596204263029578 37 0.0 1.7660340438382631E-4 0.0 0.05147989237788537 0.0010596204263029578 38 0.0 1.7660340438382631E-4 0.0 0.06799231068777313 0.0010596204263029578 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1395 0.0 26.980303 1 CGAATGC 315 0.0 20.95196 43 CTAGCGG 340 0.0 20.70638 29 AATACGA 330 0.0 20.66625 39 TAGGACG 140 1.8553692E-10 20.428162 4 GGTATCA 655 0.0 20.162058 1 TAGCGGC 350 0.0 20.114769 30 CGCAATA 350 0.0 20.113882 36 CAATACG 345 0.0 19.76772 38 GCGCAAT 360 0.0 19.555164 35 TCTAGCG 350 0.0 19.486183 28 CGGATCG 80 8.986273E-5 19.250463 26 TCTAGAT 290 0.0 18.966812 2 AACGCAG 2020 0.0 18.732298 6 TACGAAT 365 0.0 18.684555 41 ATACGAA 365 0.0 18.684555 40 TTAGGAC 225 0.0 18.577404 3 TCAACGC 2035 0.0 18.486115 4 CAACGCA 2090 0.0 18.210161 5 TATACTG 135 5.525908E-8 17.925568 5 >>END_MODULE