##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062104_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1320942 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.262037243118925 32.0 32.0 32.0 32.0 32.0 2 31.492745328712388 32.0 32.0 32.0 32.0 32.0 3 31.602048386681627 32.0 32.0 32.0 32.0 32.0 4 31.67994128432588 32.0 32.0 32.0 32.0 32.0 5 31.654640400562627 32.0 32.0 32.0 32.0 32.0 6 35.315602047629646 36.0 36.0 36.0 36.0 36.0 7 35.32656467884283 36.0 36.0 36.0 36.0 36.0 8 35.281885957142705 36.0 36.0 36.0 36.0 36.0 9 35.36325061963356 36.0 36.0 36.0 36.0 36.0 10 35.24488736068654 36.0 36.0 36.0 36.0 36.0 11 35.364331666341144 36.0 36.0 36.0 36.0 36.0 12 35.289529744682206 36.0 36.0 36.0 36.0 36.0 13 35.3180268323666 36.0 36.0 36.0 36.0 36.0 14 35.28678700503126 36.0 36.0 36.0 36.0 36.0 15 35.26602227804097 36.0 36.0 36.0 36.0 36.0 16 35.27799479462384 36.0 36.0 36.0 36.0 36.0 17 35.25596279019064 36.0 36.0 36.0 36.0 36.0 18 35.255861347432365 36.0 36.0 36.0 36.0 36.0 19 35.24857412361784 36.0 36.0 36.0 36.0 36.0 20 35.24538094783874 36.0 36.0 36.0 36.0 36.0 21 35.23449553424753 36.0 36.0 36.0 36.0 36.0 22 35.22282507483296 36.0 36.0 36.0 36.0 36.0 23 35.19719336655205 36.0 36.0 36.0 36.0 36.0 24 35.176708742700285 36.0 36.0 36.0 36.0 36.0 25 35.16555155336116 36.0 36.0 36.0 36.0 36.0 26 35.12142546758298 36.0 36.0 36.0 36.0 36.0 27 35.115274554068236 36.0 36.0 36.0 36.0 36.0 28 35.100731901930594 36.0 36.0 36.0 36.0 36.0 29 35.08204977962696 36.0 36.0 36.0 36.0 36.0 30 35.06450850983616 36.0 36.0 36.0 36.0 36.0 31 35.061886895866735 36.0 36.0 36.0 36.0 36.0 32 35.045204861379226 36.0 36.0 36.0 36.0 36.0 33 35.025057118329194 36.0 36.0 36.0 36.0 36.0 34 35.003848011494824 36.0 36.0 36.0 36.0 36.0 35 34.99641922204003 36.0 36.0 36.0 36.0 36.0 36 34.980077853531796 36.0 36.0 36.0 36.0 36.0 37 34.96981245202287 36.0 36.0 36.0 36.0 36.0 38 34.958024652104335 36.0 36.0 36.0 36.0 36.0 39 34.9335852747509 36.0 36.0 36.0 36.0 36.0 40 34.91762393806844 36.0 36.0 36.0 36.0 36.0 41 34.8924199548504 36.0 36.0 36.0 36.0 36.0 42 34.870462896932644 36.0 36.0 36.0 36.0 36.0 43 34.857653099076266 36.0 36.0 36.0 32.0 36.0 44 34.81390628808835 36.0 36.0 36.0 32.0 36.0 45 34.80839885475668 36.0 36.0 36.0 32.0 36.0 46 34.790052856219276 36.0 36.0 36.0 32.0 36.0 47 34.7634839379776 36.0 36.0 36.0 32.0 36.0 48 34.74065553218839 36.0 36.0 36.0 32.0 36.0 49 34.717603043888374 36.0 36.0 36.0 32.0 36.0 50 34.32983204410186 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 10.0 21 22.0 22 81.0 23 240.0 24 636.0 25 1302.0 26 2943.0 27 5433.0 28 9329.0 29 15190.0 30 22266.0 31 33111.0 32 50236.0 33 85870.0 34 198430.0 35 895841.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.84710336993563 17.885346459674363 12.167285119273002 26.100265051117 2 16.372115559324087 19.58285385500575 37.14788625764642 26.897144328023742 3 18.83490191803388 23.062888739499872 28.23369186697917 29.868517475487078 4 12.93253289324269 15.544233651793421 34.64010477387315 36.88312868109074 5 15.018221844713848 36.185086097648494 32.892133038392295 15.904559019245356 6 35.38033521583115 34.43456932184657 16.237452117431523 13.947643344890759 7 31.040348478585738 29.97391255634237 19.930928080112526 19.05481088495937 8 28.490350068360303 33.086918274988605 18.63972831509635 19.78300334155474 9 26.90473919369662 14.762798063805981 18.687951477051985 39.644511265445416 10 16.68581966505721 26.948798660349958 30.524883000162006 25.840498674430822 11 37.01547834802739 21.72737334417408 21.602386781554376 19.65476152624415 12 24.504179593047994 23.721026358462368 28.3704356436543 23.40435840483534 13 29.27070227156075 19.853331940387996 25.115561470526337 25.760404317524916 14 23.64971361346675 19.34520970640649 24.91691535283154 32.08816132729522 15 25.155684352530237 27.119055946438227 22.00369130514436 25.72156839588718 16 25.93163458197287 26.164197827138587 23.192808708403394 24.711358882485158 17 24.16851004813232 26.18865930525337 24.896853911829588 24.745976734784723 18 24.68783546237598 25.54480225415576 25.71808820701653 24.049274076451734 19 25.454637675234792 25.031681936072893 25.313450552711625 24.200229835980686 20 25.88694414583554 24.5398731206565 24.926491740730086 24.64669099277787 21 26.479360940904296 24.312649609142568 24.752865757921242 24.4551236920319 22 25.921122956193383 24.191296816968496 25.226164358465397 24.66141586837272 23 24.81956058630886 24.442935420328826 25.52844863741179 25.209055355950525 24 24.77108948158534 24.829911630509088 25.3269095811969 25.072089306708676 25 25.078599390282214 24.541784291326092 25.183221935305113 25.196394383086577 26 24.87461551913528 25.16221439781004 25.39947022454515 24.563699858509526 27 25.132633223714095 24.73299236299109 25.25391086320609 24.880463550088724 28 24.895451971498737 24.6557712631461 25.538183877346466 24.910592888008697 29 24.776502668946872 24.87567499638513 25.53467889741569 24.813143437252304 30 24.867555033362958 25.07642366037159 25.460926652969206 24.595094653296247 31 25.302645932836864 24.665899027429855 24.935859729448808 25.095595310284473 32 25.05019168226167 24.824518371821195 24.951246691739797 25.17404325417734 33 24.826562902175723 24.7408663527488 25.195996790164582 25.236573954910895 34 25.27054658927716 24.626079820612187 25.322479421804374 24.780894168306286 35 25.398484867984262 24.552194231233642 25.503939994291947 24.54538090649015 36 24.74639272033552 25.076536405892774 25.113328387360518 25.063742486411194 37 25.414199010843173 24.65578992870894 25.163995176100347 24.766015884347535 38 24.672468586811533 24.81448844839516 25.372575026004167 25.140467938789136 39 25.38957460209792 24.541383027689626 24.966992901959834 25.102049468252623 40 25.361314396328073 24.730097710647183 25.26093141177388 24.647656481250866 41 24.77665407708037 25.19143665878587 25.253059769117737 24.778849495016022 42 25.413779058411322 25.13161739878293 25.141383659607197 24.31321988319855 43 25.164700057385726 24.56767654438006 25.179160048634024 25.088463349600193 44 24.725563408858285 24.82330068862765 25.14959633216442 25.301539570349647 45 24.969623375276417 24.944337910709 25.183489954327182 24.9025487596874 46 25.086247294480856 24.87124416406556 25.000927390263232 25.04158115119035 47 24.820145246482205 24.990177352722746 25.407384359620178 24.78229304117487 48 25.166401695813462 25.50177909001438 24.64789158906806 24.683927625104097 49 24.907562745288047 25.11658752846553 24.826405712486068 25.14944401376036 50 24.85544144299646 25.439126425713027 24.93319040243225 24.772241728858262 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 55.0 1 59.0 2 63.0 3 167.0 4 271.0 5 282.0 6 293.0 7 224.5 8 156.0 9 245.5 10 335.0 11 524.0 12 713.0 13 1304.5 14 1896.0 15 2293.0 16 2690.0 17 2632.0 18 2574.0 19 2466.5 20 2359.0 21 2830.0 22 3301.0 23 4182.5 24 5064.0 25 6422.5 26 7781.0 27 9549.5 28 11318.0 29 13235.5 30 15153.0 31 17678.5 32 20204.0 33 23339.0 34 26474.0 35 30691.5 36 34909.0 37 40356.0 38 45803.0 39 50932.5 40 56062.0 41 62047.0 42 68032.0 43 71145.0 44 74258.0 45 79606.0 46 84954.0 47 89565.0 48 94176.0 49 98778.5 50 103381.0 51 103356.5 52 103332.0 53 103320.5 54 103309.0 55 101616.5 56 99924.0 57 95343.0 58 90762.0 59 84572.0 60 78382.0 61 68081.5 62 57781.0 63 49948.5 64 42116.0 65 35577.5 66 29039.0 67 24410.0 68 19781.0 69 16777.5 70 13774.0 71 10554.5 72 7335.0 73 6485.5 74 5636.0 75 4196.5 76 2757.0 77 2363.0 78 1969.0 79 1583.5 80 1198.0 81 967.5 82 737.0 83 584.0 84 431.0 85 338.5 86 246.0 87 164.0 88 82.0 89 53.5 90 25.0 91 17.0 92 9.0 93 10.0 94 11.0 95 12.0 96 13.0 97 14.0 98 15.0 99 9.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03346096952023632 2 0.004693620158947176 3 4.542213057045654E-4 4 1.5140710190152178E-4 5 0.0 6 1.5140710190152178E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.327390604583698E-4 17 0.0 18 3.0281420380304355E-4 19 0.0 20 1.5140710190152178E-4 21 0.0 22 0.0 23 0.0 24 8.327390604583698E-4 25 2.271106528522827E-4 26 3.7851775475380447E-4 27 4.542213057045654E-4 28 0.0013626639171136963 29 6.813319585568481E-4 30 0.0012112568152121742 31 6.813319585568481E-4 32 4.542213057045654E-4 33 1.5140710190152178E-4 34 3.7851775475380447E-4 35 7.570355095076089E-5 36 1.5140710190152178E-4 37 0.001438367468064457 38 0.0 39 0.0010598497133106526 40 7.570355095076089E-5 41 6.813319585568481E-4 42 0.005147841464651741 43 0.00423939885324261 44 0.004087991751341088 45 0.0018925887737690225 46 0.002346810079473588 47 0.0011355532642614134 48 0.0031795491399319573 49 0.0034823633437350014 50 0.0018168852228182615 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1320942.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.31527978925347 #Duplication Level Percentage of deduplicated Percentage of total 1 76.72175567385142 44.740506480433915 2 13.690971178237044 15.967856296909972 3 4.211249290572475 7.367405419260872 4 1.7648827758322803 4.11678531471575 5 0.9449560551886135 2.7552688373436625 6 0.5848777343999417 2.0464385234422373 7 0.38788191941562966 1.583360985914058 8 0.28808240873844976 1.343968501435582 9 0.2123406346385666 1.114443316761809 >10 1.0949863965983375 11.145441442730808 >50 0.05737872411455059 2.301175447227455 >100 0.037109248191751015 4.0670772183525985 >500 0.003397295027718845 1.3645497207303428 >1k 1.3066519337380172E-4 0.08572249474098925 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.57035509507609E-5 2 0.0 0.0 0.0 0.0 7.57035509507609E-5 3 0.0 0.0 0.0 0.0 7.57035509507609E-5 4 0.0 0.0 0.0 0.0 7.57035509507609E-5 5 0.0 0.0 0.0 0.0 7.57035509507609E-5 6 0.0 0.0 0.0 0.0 1.514071019015218E-4 7 0.0 0.0 0.0 7.57035509507609E-5 1.514071019015218E-4 8 0.0 0.0 0.0 7.57035509507609E-5 1.514071019015218E-4 9 0.0 0.0 0.0 7.57035509507609E-5 1.514071019015218E-4 10 0.0 0.0 0.0 7.57035509507609E-5 1.514071019015218E-4 11 0.0 0.0 0.0 7.57035509507609E-5 1.514071019015218E-4 12 0.0 0.0 0.0 7.57035509507609E-5 3.7851775475380447E-4 13 0.0 0.0 0.0 7.57035509507609E-5 4.542213057045654E-4 14 0.0 0.0 0.0 1.514071019015218E-4 4.542213057045654E-4 15 0.0 0.0 0.0 1.514071019015218E-4 4.542213057045654E-4 16 0.0 0.0 0.0 3.028142038030436E-4 4.542213057045654E-4 17 0.0 0.0 0.0 3.7851775475380447E-4 4.542213057045654E-4 18 0.0 0.0 0.0 5.299248566553263E-4 4.542213057045654E-4 19 0.0 0.0 0.0 6.056284076060872E-4 4.542213057045654E-4 20 0.0 0.0 0.0 8.327390604583698E-4 4.542213057045654E-4 21 0.0 0.0 0.0 9.084426114091308E-4 6.056284076060872E-4 22 0.0 0.0 0.0 9.841461623598916E-4 6.81331958556848E-4 23 0.0 0.0 0.0 0.0012869603661629352 6.81331958556848E-4 24 0.0 0.0 0.0 0.0017411816718675007 6.81331958556848E-4 25 0.0 0.0 0.0 0.001968292324719783 6.81331958556848E-4 26 0.0 0.0 0.0 0.002422513630424349 6.81331958556848E-4 27 0.0 0.0 0.0 0.002801031385178153 6.81331958556848E-4 28 0.0 0.0 0.0 0.003558066894685762 6.81331958556848E-4 29 0.0 0.0 0.0 0.004845027260848698 6.81331958556848E-4 30 0.0 0.0 0.0 0.008554501257435981 6.81331958556848E-4 31 0.0 0.0 0.0 0.015367820843004462 6.81331958556848E-4 32 0.0 0.0 0.0 0.022483954632375985 6.81331958556848E-4 33 0.0 0.0 0.0 0.029297274217944466 8.327390604583698E-4 34 0.0 0.0 0.0 0.03800318257728197 9.084426114091308E-4 35 0.0 0.0 0.0 0.04973723297464991 9.084426114091308E-4 36 0.0 0.0 0.0 0.06465083251194981 9.084426114091308E-4 37 0.0 0.0 0.0 0.08387953445344307 9.084426114091308E-4 38 0.0 0.0 0.0 0.10908881692004645 9.084426114091308E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 550 0.0 32.00862 1 GTATCAA 1655 0.0 29.119625 1 AGCGACG 50 0.0025810667 21.99926 33 CGACGTT 65 4.9336127E-4 20.30701 7 ATACCGT 285 0.0 19.297598 6 TCAACGC 2615 0.0 18.507982 4 TATCAAC 2635 0.0 18.367506 2 AACGTCG 60 0.0074106553 18.334106 22 CGCACGA 60 0.007413892 18.332718 10 GGCGTTA 340 0.0 18.119097 42 TACGCTC 85 1.4313275E-4 18.117039 4 ATCAACG 2660 0.0 18.112175 3 CAACGCA 2695 0.0 17.958582 5 AACGCAG 2795 0.0 17.473475 6 AGCGTAT 140 8.376992E-8 17.285135 8 CGTCGTA 280 0.0 17.285135 10 CGGCGTT 395 0.0 16.709564 41 ACCGTCG 290 0.0 16.689095 8 TACCGTC 290 0.0 16.689095 7 ACGGACC 425 0.0 16.56415 8 >>END_MODULE