##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062103_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2960785 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.061055091808424 32.0 32.0 32.0 32.0 32.0 2 30.948049588200426 32.0 32.0 32.0 32.0 32.0 3 31.29150039600984 32.0 32.0 32.0 32.0 32.0 4 31.461601568502946 32.0 32.0 32.0 32.0 32.0 5 31.37002045065751 32.0 32.0 32.0 32.0 32.0 6 34.97622725054335 36.0 36.0 36.0 36.0 36.0 7 34.99556637851111 36.0 36.0 36.0 36.0 36.0 8 34.91547984740534 36.0 36.0 36.0 36.0 36.0 9 35.085394582855564 36.0 36.0 36.0 36.0 36.0 10 34.865835243018324 36.0 36.0 36.0 32.0 36.0 11 35.09563207054886 36.0 36.0 36.0 36.0 36.0 12 34.981227613622735 36.0 36.0 36.0 36.0 36.0 13 35.04608777739687 36.0 36.0 36.0 36.0 36.0 14 34.99184202838099 36.0 36.0 36.0 32.0 36.0 15 34.9395542060636 36.0 36.0 36.0 32.0 36.0 16 34.96721274932155 36.0 36.0 36.0 36.0 36.0 17 34.94784491275118 36.0 36.0 36.0 32.0 36.0 18 34.94138446391751 36.0 36.0 36.0 32.0 36.0 19 34.93940323258865 36.0 36.0 36.0 32.0 36.0 20 34.94372742363934 36.0 36.0 36.0 32.0 36.0 21 34.932564843445235 36.0 36.0 36.0 32.0 36.0 22 34.91274746393271 36.0 36.0 36.0 32.0 36.0 23 34.87464270455302 36.0 36.0 36.0 32.0 36.0 24 34.86274079340445 36.0 36.0 36.0 32.0 36.0 25 34.8496506838558 36.0 36.0 36.0 32.0 36.0 26 34.78703316856847 36.0 36.0 36.0 32.0 36.0 27 34.770280516822396 36.0 36.0 36.0 32.0 36.0 28 34.75323773931576 36.0 36.0 36.0 32.0 36.0 29 34.72574232847032 36.0 36.0 36.0 32.0 36.0 30 34.7099461798138 36.0 36.0 36.0 32.0 36.0 31 34.710829053781346 36.0 36.0 36.0 32.0 36.0 32 34.676520247164184 36.0 36.0 36.0 32.0 36.0 33 34.65600609297872 36.0 36.0 36.0 32.0 36.0 34 34.64086010973441 36.0 36.0 36.0 32.0 36.0 35 34.64007619600883 36.0 36.0 36.0 32.0 36.0 36 34.601850860498146 36.0 36.0 36.0 32.0 36.0 37 34.59349260415734 36.0 36.0 36.0 32.0 36.0 38 34.58346283164769 36.0 36.0 36.0 32.0 36.0 39 34.55874810227693 36.0 36.0 36.0 32.0 36.0 40 34.552891885091285 36.0 36.0 36.0 32.0 36.0 41 34.51861347581807 36.0 36.0 36.0 32.0 36.0 42 34.4984748977045 36.0 36.0 36.0 32.0 36.0 43 34.48601705290996 36.0 36.0 36.0 32.0 36.0 44 34.44203175846946 36.0 36.0 36.0 32.0 36.0 45 34.43047705253843 36.0 36.0 36.0 32.0 36.0 46 34.41268278513975 36.0 36.0 36.0 32.0 36.0 47 34.38665894348965 36.0 36.0 36.0 32.0 36.0 48 34.359611386845046 36.0 36.0 36.0 32.0 36.0 49 34.34084541768484 36.0 36.0 36.0 32.0 36.0 50 33.84000493112468 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 21.0 21 55.0 22 127.0 23 452.0 24 1266.0 25 3126.0 26 6923.0 27 14081.0 28 25633.0 29 43034.0 30 68324.0 31 108131.0 32 173657.0 33 307484.0 34 664613.0 35 1543854.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.772145449827974 17.52571642472777 12.060469409211425 26.641668716232836 2 16.118406942210058 19.605217871219057 37.221393393592194 27.054981792978687 3 18.840299231858083 23.046047647563263 28.3611317419289 29.752521378649753 4 12.985547071316244 15.825031478149032 35.078783187155835 36.11063826337889 5 14.926075348260682 36.268962454214 33.29552804408291 15.509434153442413 6 35.42145284590355 34.84788815927684 16.026137689299652 13.70452130551996 7 30.876102114810767 29.89474075287466 19.998311258669577 19.230845873645 8 27.986834572588016 34.199308629299324 18.461894396249644 19.35196240186302 9 26.9353904454393 14.530639678328553 18.038797143325166 40.49517273290698 10 15.747134201122678 27.286154324198353 31.841237781935845 25.125473692743128 11 37.33570657781636 21.16975734475823 21.803440641586604 19.691095435838808 12 24.101614943334283 23.29642307698803 29.05628068231905 23.54568129735864 13 29.7619381346501 19.611994791921735 24.782954520507232 25.843112552920932 14 23.362216439221356 18.80065590713274 25.144007416951926 32.693120236693986 15 25.200951774613827 27.154893043567835 21.79449031253536 25.84966486928298 16 25.635173036185204 26.11795317971553 23.386263293848085 24.86061049025118 17 24.275791724154235 25.981859540628584 25.080713391887627 24.661635343329554 18 24.746468664655033 25.732256859514628 25.325877184983135 24.195397290847204 19 25.48874707214472 25.216386870373903 25.16548820667492 24.129377850806456 20 25.630281760307 24.88405922900696 25.001359439525885 24.484299571160157 21 25.754825156166355 24.783562467386183 24.781468428136456 24.680143948311006 22 25.61084307033439 24.611648599949 24.90393594941882 24.873572380297794 23 24.848486076660777 24.774856929786164 25.085788088560328 25.29086890499273 24 24.75759635013125 25.011111996768403 25.05022352338788 25.181068129712465 25 24.968293817269036 24.582280541708787 25.30459044731133 25.144835193710847 26 24.80230669490704 25.15332989053872 25.155964337691543 24.888399076862697 27 25.09993153824148 25.25340476503296 24.735162425268772 24.911501271456782 28 25.030288107708465 24.96652011512014 25.0532891685944 24.949902608577 29 24.96609840328968 25.07147621821989 25.057527167717915 24.904898210772515 30 25.065523893929647 25.070860376012583 25.01283457716148 24.850781152896293 31 24.96650370257787 24.88378887284579 25.007878004914254 25.14182941966208 32 25.231941588108757 25.05425114505802 24.69002120058755 25.023786066245673 33 24.775363248873607 25.091327285377503 24.92035882436385 25.21295064138504 34 25.099357767333778 24.969391356625735 25.17315626197959 24.758094614060894 35 25.165539204378305 24.944414966466596 25.116464281866357 24.773581547288735 36 24.976442002743873 25.07395015769504 24.95735918059375 24.992248658967338 37 25.24924495278548 24.880756242860745 25.014574049343036 24.855424755010738 38 25.009178309130853 24.948957793287928 25.032246515704447 25.009617381876765 39 25.212495685238213 25.139845566991788 24.81415282396515 24.833505923804854 40 25.407772751698115 24.8650777379872 24.88767314277763 24.83947636753706 41 24.777421712562603 25.184716335962843 25.072143736261953 24.9657182152126 42 25.30980433748027 25.00885782523418 24.966806376553325 24.71453146073222 43 25.04823255386644 24.696384855248297 25.12743797320594 25.127944617679326 44 24.859229165899666 25.002170122030098 25.11190905550547 25.026691656564765 45 25.00661156522347 25.18798630468727 24.885458643350724 24.919943486738536 46 24.944430690268607 24.98175273084189 24.97320750345271 25.100609075436797 47 24.989251030735804 25.130499073038614 25.036772789588042 24.843477106637543 48 25.16514842924068 25.369054977420653 24.671881702452485 24.793914890886185 49 25.027063012149565 25.162741164792042 24.823967983063365 24.986227839995028 50 25.058296394270062 25.230686195170655 24.745941206431382 24.965076204127897 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 28.0 2 33.0 3 127.0 4 221.0 5 235.0 6 249.0 7 218.5 8 188.0 9 272.0 10 356.0 11 550.0 12 744.0 13 1394.5 14 2045.0 15 2716.0 16 3387.0 17 3487.5 18 3588.0 19 3913.5 20 4239.0 21 5305.0 22 6371.0 23 8632.0 24 10893.0 25 13961.0 26 17029.0 27 21322.0 28 25615.0 29 30067.5 30 34520.0 31 40558.5 32 46597.0 33 54349.0 34 62101.0 35 71989.5 36 81878.0 37 91625.0 38 101372.0 39 115442.0 40 129512.0 41 140256.5 42 151001.0 43 161109.5 44 171218.0 45 185303.5 46 199389.0 47 207683.0 48 215977.0 49 222857.5 50 229738.0 51 232391.0 52 235044.0 53 234570.5 54 234097.0 55 228248.5 56 222400.0 57 212127.5 58 201855.0 59 185532.5 60 169210.0 61 149162.0 62 129114.0 63 110950.0 64 92786.0 65 77606.0 66 62426.0 67 52358.5 68 42291.0 69 35468.5 70 28646.0 71 22672.5 72 16699.0 73 13997.5 74 11296.0 75 9150.0 76 7004.0 77 5637.5 78 4271.0 79 3450.0 80 2629.0 81 2020.0 82 1411.0 83 1035.0 84 659.0 85 493.5 86 328.0 87 237.0 88 146.0 89 108.5 90 71.0 91 51.0 92 31.0 93 32.5 94 34.0 95 26.5 96 19.0 97 21.5 98 24.0 99 17.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.027323834726263475 2 0.003850330233367164 3 1.3509930643393561E-4 4 3.3774826608483904E-5 5 0.0 6 1.0132447982545169E-4 7 0.0 8 0.0 9 0.0 10 1.6887413304241948E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.741720523442262E-4 17 0.0 18 2.364237862593873E-4 19 0.0 20 2.0264895965090338E-4 21 0.0 22 0.0 23 3.3774826608483904E-5 24 7.092713587781618E-4 25 2.0264895965090338E-4 26 4.0529791930180676E-4 27 2.7019861286787123E-4 28 0.0017562909836411626 29 3.3774826608483897E-4 30 0.0011145692780799685 31 3.3774826608483897E-4 32 6.079468789527101E-4 33 1.6887413304241948E-4 34 6.754965321696779E-4 35 2.0264895965090338E-4 36 2.364237862593873E-4 37 0.0014523175441648077 38 0.0 39 6.41721705561194E-4 40 2.0264895965090338E-4 41 9.79469971646033E-4 42 0.004255628152668971 43 0.004356952632494423 44 0.004120528846235035 45 0.00216158890294297 46 0.002296688209376905 47 0.0012158937579054203 48 0.0038841050599756483 49 0.0034450323140653577 50 0.0017900658102496466 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2960785.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.043652420409714 #Duplication Level Percentage of deduplicated Percentage of total 1 63.27440861904774 27.235616517052673 2 16.511159960145694 14.214012607645943 3 7.582038886163134 9.79075939362109 4 3.910997144920291 6.733744068926552 5 2.363332295790862 5.086322694697539 6 1.5217113435808867 3.9300008494374206 7 1.0261648189737034 3.0918917255769713 8 0.7018157116804731 2.416696924540541 9 0.5330270626013629 2.064908845195653 >10 2.4056784330616257 17.846314299901067 >50 0.11860605143843642 3.4664515911114004 >100 0.04940328267507702 3.6208398305175478 >500 0.001498638499671444 0.42672995150522236 >1k 1.577514209841066E-4 0.07571070027037156 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.75496532169678E-5 2 0.0 0.0 0.0 0.0 6.75496532169678E-5 3 0.0 0.0 0.0 0.0 6.75496532169678E-5 4 0.0 0.0 0.0 3.37748266084839E-5 6.75496532169678E-5 5 0.0 0.0 0.0 3.37748266084839E-5 6.75496532169678E-5 6 0.0 0.0 0.0 3.37748266084839E-5 1.0132447982545169E-4 7 0.0 0.0 0.0 3.37748266084839E-5 1.0132447982545169E-4 8 0.0 0.0 0.0 3.37748266084839E-5 1.350993064339356E-4 9 0.0 0.0 0.0 6.75496532169678E-5 2.0264895965090338E-4 10 0.0 0.0 0.0 6.75496532169678E-5 2.0264895965090338E-4 11 0.0 0.0 0.0 6.75496532169678E-5 2.0264895965090338E-4 12 0.0 0.0 0.0 6.75496532169678E-5 2.0264895965090338E-4 13 0.0 0.0 0.0 6.75496532169678E-5 2.0264895965090338E-4 14 0.0 0.0 0.0 6.75496532169678E-5 2.0264895965090338E-4 15 0.0 0.0 0.0 6.75496532169678E-5 3.0397343947635507E-4 16 0.0 0.0 0.0 6.75496532169678E-5 3.0397343947635507E-4 17 0.0 0.0 0.0 6.75496532169678E-5 3.0397343947635507E-4 18 0.0 0.0 0.0 6.75496532169678E-5 3.0397343947635507E-4 19 0.0 0.0 0.0 6.75496532169678E-5 3.0397343947635507E-4 20 0.0 0.0 0.0 1.0132447982545169E-4 3.0397343947635507E-4 21 0.0 0.0 0.0 1.0132447982545169E-4 3.7152309269332287E-4 22 0.0 0.0 0.0 1.0132447982545169E-4 3.7152309269332287E-4 23 0.0 0.0 0.0 1.0132447982545169E-4 4.7284757251877456E-4 24 0.0 0.0 0.0 1.0132447982545169E-4 4.7284757251877456E-4 25 0.0 0.0 0.0 1.350993064339356E-4 5.403972257357424E-4 26 0.0 0.0 0.0 1.350993064339356E-4 5.741720523442262E-4 27 0.0 0.0 0.0 1.350993064339356E-4 5.741720523442262E-4 28 0.0 0.0 0.0 1.350993064339356E-4 5.741720523442262E-4 29 0.0 0.0 0.0 1.350993064339356E-4 5.741720523442262E-4 30 0.0 0.0 0.0 1.6887413304241948E-4 5.741720523442262E-4 31 0.0 0.0 0.0 3.3774826608483897E-4 6.41721705561194E-4 32 0.0 0.0 0.0 5.741720523442262E-4 6.754965321696779E-4 33 0.0 0.0 0.0 9.456951450375491E-4 7.092713587781618E-4 34 0.0 0.0 0.0 0.001317218237730872 8.781454918205813E-4 35 0.0 0.0 0.0 0.0017225161570326789 8.781454918205813E-4 36 0.0 0.0 0.0 0.002364237862593873 8.781454918205813E-4 37 0.0 0.0 0.0 0.0034450323140653577 8.781454918205813E-4 38 0.0 0.0 0.0 0.005066223991272585 9.456951450375491E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2575 0.0 27.777458 1 GGTATCA 1150 0.0 22.96518 1 CAACGCA 3750 0.0 18.655155 5 TCAACGC 3750 0.0 18.59649 4 ATCAACG 3780 0.0 18.565296 3 TATCAAC 3890 0.0 18.267757 2 AACGCAG 3990 0.0 17.477905 6 CGGATCG 265 0.0 16.603302 26 TTAGTCG 110 5.622152E-5 16.001167 39 ATCGATT 265 0.0 15.773136 29 GGATCGA 280 0.0 15.713839 27 GTATTAT 345 0.0 15.310119 1 TAGACGT 130 1.370865E-5 15.230079 4 GTACCGT 375 0.0 14.666002 6 TACCGTA 120 1.18239164E-4 14.666002 7 ACGCAGA 4890 0.0 14.441064 7 GTACTAA 185 1.2617056E-7 14.275651 1 GGCGTTA 355 0.0 14.255042 42 TAATACT 450 0.0 14.177135 4 GTATAGG 475 0.0 13.899977 1 >>END_MODULE