##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062101_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2207140 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.265638790470927 32.0 32.0 32.0 32.0 32.0 2 31.40108466159827 32.0 32.0 32.0 32.0 32.0 3 31.54324646374947 32.0 32.0 32.0 32.0 32.0 4 31.61943284068976 32.0 32.0 32.0 32.0 32.0 5 31.593819603649973 32.0 32.0 32.0 32.0 32.0 6 35.22926320940221 36.0 36.0 36.0 36.0 36.0 7 35.22951783756354 36.0 36.0 36.0 36.0 36.0 8 35.17170682421595 36.0 36.0 36.0 36.0 36.0 9 35.271687795065105 36.0 36.0 36.0 36.0 36.0 10 35.137305744085104 36.0 36.0 36.0 36.0 36.0 11 35.27325316925977 36.0 36.0 36.0 36.0 36.0 12 35.18732069556077 36.0 36.0 36.0 36.0 36.0 13 35.22555207191207 36.0 36.0 36.0 36.0 36.0 14 35.18837771958281 36.0 36.0 36.0 36.0 36.0 15 35.165552253142074 36.0 36.0 36.0 36.0 36.0 16 35.180567159310236 36.0 36.0 36.0 36.0 36.0 17 35.162975162427394 36.0 36.0 36.0 36.0 36.0 18 35.154133403408935 36.0 36.0 36.0 36.0 36.0 19 35.1505998713267 36.0 36.0 36.0 36.0 36.0 20 35.14936025807153 36.0 36.0 36.0 36.0 36.0 21 35.140922188896035 36.0 36.0 36.0 36.0 36.0 22 35.12641925750066 36.0 36.0 36.0 36.0 36.0 23 35.09526853756445 36.0 36.0 36.0 36.0 36.0 24 35.08050282265737 36.0 36.0 36.0 36.0 36.0 25 35.06416448435532 36.0 36.0 36.0 36.0 36.0 26 35.02722890256169 36.0 36.0 36.0 36.0 36.0 27 35.009924608316645 36.0 36.0 36.0 36.0 36.0 28 34.99502750165372 36.0 36.0 36.0 36.0 36.0 29 34.96918364942867 36.0 36.0 36.0 36.0 36.0 30 34.95620169087598 36.0 36.0 36.0 36.0 36.0 31 34.95702447511259 36.0 36.0 36.0 36.0 36.0 32 34.9381842565492 36.0 36.0 36.0 36.0 36.0 33 34.91186331632792 36.0 36.0 36.0 32.0 36.0 34 34.89859727973758 36.0 36.0 36.0 32.0 36.0 35 34.8903572043459 36.0 36.0 36.0 32.0 36.0 36 34.86809989398044 36.0 36.0 36.0 32.0 36.0 37 34.86195800900713 36.0 36.0 36.0 32.0 36.0 38 34.84692407368812 36.0 36.0 36.0 32.0 36.0 39 34.834894478827806 36.0 36.0 36.0 32.0 36.0 40 34.81891950669192 36.0 36.0 36.0 32.0 36.0 41 34.793972289931766 36.0 36.0 36.0 32.0 36.0 42 34.76791413322218 36.0 36.0 36.0 32.0 36.0 43 34.76709225513561 36.0 36.0 36.0 32.0 36.0 44 34.720288246327826 36.0 36.0 36.0 32.0 36.0 45 34.70878920231612 36.0 36.0 36.0 32.0 36.0 46 34.70102304339552 36.0 36.0 36.0 32.0 36.0 47 34.679299908478846 36.0 36.0 36.0 32.0 36.0 48 34.66038402638709 36.0 36.0 36.0 32.0 36.0 49 34.648814302672235 36.0 36.0 36.0 32.0 36.0 50 34.224673106372954 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 3.0 20 11.0 21 57.0 22 125.0 23 382.0 24 1005.0 25 2489.0 26 5196.0 27 9840.0 28 17320.0 29 27653.0 30 41782.0 31 63027.0 32 95239.0 33 162347.0 34 368097.0 35 1412565.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.00312899537222 17.690154224483663 11.921680847004183 26.385035933139932 2 16.29527263830144 19.589133887165872 36.97772360781044 27.137869866722248 3 18.79167172602273 22.79754903648717 28.276333268694398 30.134445968795703 4 12.627840838297905 15.721755630252558 35.16955660699213 36.48084692445741 5 14.752783697968772 36.485699114146115 33.27502247256173 15.486494715323387 6 35.5572399900867 34.8784420722411 16.059084687538654 13.505233250133545 7 31.13635745806791 30.004485442699604 19.825566117237692 19.0335909819948 8 28.187065614324418 33.69509863443189 18.651105049974177 19.466730701269515 9 26.77410585644771 14.615520537890664 18.450120971030383 40.16025263463124 10 15.81961987894736 27.232494192708295 31.372695602769014 25.575190325575324 11 37.523356017289345 21.37689498627183 21.544079668711547 19.555669327727284 12 24.251655989198692 23.693694101869387 28.682820301385505 23.371829607546417 13 29.391520247922653 19.50356570040867 25.045805884538364 26.05910816713031 14 23.264541442772092 19.40946201872106 25.11644028018159 32.20955625832526 15 25.06478972788314 27.379867158404085 21.895031579328904 25.66031153438386 16 25.68137282664099 26.268833890241833 23.43591776632497 24.61387551679221 17 24.14409597941227 26.32769103908225 24.981650461683447 24.546562519822032 18 24.82583796224979 25.599644789184197 25.624971682811235 23.94954556575478 19 25.32372210190563 25.450537800048934 25.196272098734106 24.029467999311326 20 25.606817175781593 24.756437202866525 24.884975110222275 24.751770511129607 21 26.219949799287768 24.646737406779813 24.758239169241644 24.375073624690778 22 25.569469992841416 24.67858858069719 25.12550178058483 24.626439645876562 23 24.45291191315458 24.758012631731564 25.527968320994592 25.261107134119264 24 24.57114947481357 25.240981350818554 25.32964889555217 24.858220278815708 25 24.70776608238006 24.80635538544068 25.291690226610413 25.194188305568844 26 24.6177852203036 25.562131196265202 25.366764893509053 24.453318689922142 27 25.070849959381626 25.094002208298654 25.045160477706556 24.789987354613167 28 24.717390102695568 24.968850612521557 25.49524127975729 24.818518005025584 29 24.60593621580967 25.30816037116074 25.41055578964538 24.675347623384212 30 24.587504876270717 25.365352176617733 25.51033769392379 24.536805253187755 31 24.96710657469798 25.229030667908702 24.86516414091072 24.938698616482597 32 24.986679473703287 25.171490449092033 24.770379499075716 25.07145057812896 33 24.546074435863687 24.99597895008688 25.188989345916767 25.26895726813267 34 25.030039200477 25.146390130831364 25.403467692681307 24.420102976010323 35 25.384536270710633 24.915920565039176 25.41602499887864 24.28351816537155 36 24.499033134402474 25.435361364884386 25.135379306720214 24.930226193992926 37 25.347912389736184 25.164095939772363 24.98757415296954 24.500417517521917 38 24.656263153340138 24.930600202343395 25.41733891703241 24.995797727284057 39 25.222212858578473 25.04274805424993 24.932513803068073 24.802525284103524 40 25.306969792115495 25.036438575005924 25.203804563283054 24.452787069595527 41 24.481903080762407 25.56612339360505 25.38729273857831 24.56468078705424 42 25.45306259302639 25.282562351752464 25.13530596478987 24.12906909043128 43 25.17201788097894 24.668401722127122 25.18982455218261 24.96975584471133 44 24.658671331744777 25.230297453101148 25.12753524295243 24.983495972201645 45 24.876771292321283 25.34304452725893 25.071644597487623 24.70853958293216 46 24.747086190054173 25.172445353037233 25.068008532556195 25.012459924352402 47 24.894206024140058 25.049249700967778 25.394450686867952 24.662093588024213 48 25.312011367204473 25.571407276043917 24.6281576637785 24.488423692973114 49 24.70586422927525 25.547119492501107 24.903049714574916 24.843966563648728 50 24.94533545859767 25.56886916666138 24.858841791347732 24.626953583393217 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 26.0 1 35.0 2 44.0 3 104.5 4 165.0 5 188.0 6 211.0 7 175.0 8 139.0 9 204.5 10 270.0 11 481.5 12 693.0 13 1204.0 14 1715.0 15 2280.0 16 2845.0 17 3011.0 18 3177.0 19 3443.5 20 3710.0 21 4843.5 22 5977.0 23 7495.5 24 9014.0 25 11410.5 26 13807.0 27 17212.5 28 20618.0 29 24293.5 30 27969.0 31 32280.5 32 36592.0 33 41665.5 34 46739.0 35 53947.5 36 61156.0 37 71197.5 38 81239.0 39 89336.5 40 97434.0 41 106638.0 42 115842.0 43 122035.0 44 128228.0 45 137952.0 46 147676.0 47 156473.5 48 165271.0 49 170329.0 50 175387.0 51 172647.5 52 169908.0 53 167890.0 54 165872.0 55 164122.0 56 162372.0 57 154810.0 58 147248.0 59 133926.0 60 120604.0 61 106076.0 62 91548.0 63 78917.0 64 66286.0 65 55761.5 66 45237.0 67 38418.5 68 31600.0 69 27531.5 70 23463.0 71 18370.5 72 13278.0 73 11622.0 74 9966.0 75 7352.0 76 4738.0 77 4100.5 78 3463.0 79 2970.0 80 2477.0 81 1922.0 82 1367.0 83 1148.5 84 930.0 85 729.5 86 529.0 87 347.5 88 166.0 89 106.0 90 46.0 91 35.5 92 25.0 93 28.0 94 31.0 95 23.5 96 16.0 97 17.5 98 19.0 99 13.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030854408873021193 2 0.004304212691537464 3 3.6246001612947075E-4 4 4.5307502016183843E-5 5 1.8123000806473537E-4 6 1.3592250604855152E-4 7 0.0 8 0.0 9 0.0 10 4.5307502016183843E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.796125302427576E-4 17 0.0 18 0.0 19 0.0 20 4.0776751814565454E-4 21 0.0 22 0.0 23 0.0 24 8.60842538307493E-4 25 1.8123000806473537E-4 26 1.8123000806473537E-4 27 4.983825221780223E-4 28 0.0015404550685502506 29 4.530750201618384E-4 30 0.0010420725463722283 31 5.436900241942061E-4 32 9.061500403236768E-4 33 2.265375100809192E-4 34 0.0010873800483884122 35 4.5307502016183843E-5 36 3.6246001612947075E-4 37 0.0021294525947606405 38 4.5307502016183843E-5 39 9.967650443560446E-4 40 4.5307502016183843E-5 41 0.0010873800483884122 42 0.0047572877116993035 43 0.004621365205650751 44 0.004666672707666936 45 0.0029449876310519494 46 0.002899680129035766 47 9.061500403236768E-4 48 0.004032367679440362 49 0.003669907663310891 50 0.0019029150846797212 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2207140.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.391924418572195 #Duplication Level Percentage of deduplicated Percentage of total 1 68.7710975368227 34.65507949257826 2 16.635120149232247 16.765514345079577 3 6.539586787533233 9.886270893782042 4 3.0806526914053602 6.209600703406797 5 1.5760629444377128 3.9710422387508784 6 0.922864242018118 2.7902943079427955 7 0.5734084767532688 2.022660963506353 8 0.38872785944698535 1.5670995930116676 9 0.26801414358114406 1.2155173619804434 >10 1.1131462510775487 9.521014300982406 >50 0.07001471092661041 2.4618015942837164 >100 0.05333934322737568 5.462937207556388 >500 0.006064157466158989 2.1182027393519607 >1k 0.0019007060714826027 1.3529642577868084 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.061500403236767E-5 2 0.0 0.0 0.0 0.0 9.061500403236767E-5 3 0.0 0.0 0.0 4.530750201618384E-5 9.061500403236767E-5 4 0.0 0.0 0.0 4.530750201618384E-5 1.3592250604855152E-4 5 0.0 0.0 0.0 4.530750201618384E-5 1.3592250604855152E-4 6 0.0 0.0 0.0 4.530750201618384E-5 1.3592250604855152E-4 7 0.0 0.0 0.0 4.530750201618384E-5 1.3592250604855152E-4 8 4.530750201618384E-5 0.0 0.0 4.530750201618384E-5 1.3592250604855152E-4 9 4.530750201618384E-5 0.0 0.0 4.530750201618384E-5 1.8123000806473535E-4 10 4.530750201618384E-5 0.0 0.0 4.530750201618384E-5 1.8123000806473535E-4 11 4.530750201618384E-5 0.0 0.0 1.3592250604855152E-4 1.8123000806473535E-4 12 4.530750201618384E-5 0.0 0.0 1.3592250604855152E-4 3.171525141132869E-4 13 4.530750201618384E-5 0.0 0.0 1.3592250604855152E-4 3.624600161294707E-4 14 4.530750201618384E-5 0.0 0.0 1.3592250604855152E-4 3.624600161294707E-4 15 4.530750201618384E-5 0.0 0.0 1.3592250604855152E-4 6.343050282265738E-4 16 4.530750201618384E-5 0.0 0.0 1.3592250604855152E-4 6.796125302427576E-4 17 4.530750201618384E-5 0.0 0.0 1.3592250604855152E-4 6.796125302427576E-4 18 4.530750201618384E-5 0.0 0.0 1.3592250604855152E-4 7.249200322589414E-4 19 1.3592250604855152E-4 0.0 0.0 1.3592250604855152E-4 7.249200322589414E-4 20 1.3592250604855152E-4 0.0 0.0 1.3592250604855152E-4 9.061500403236768E-4 21 2.7184501209710305E-4 0.0 0.0 1.3592250604855152E-4 9.967650443560444E-4 22 3.171525141132869E-4 0.0 0.0 1.8123000806473535E-4 9.967650443560444E-4 23 3.171525141132869E-4 0.0 0.0 1.8123000806473535E-4 0.0010420725463722283 24 3.624600161294707E-4 0.0 0.0 2.7184501209710305E-4 0.0010873800483884122 25 3.624600161294707E-4 0.0 0.0 3.171525141132869E-4 0.0010873800483884122 26 3.624600161294707E-4 0.0 0.0 4.0776751814565454E-4 0.0012233025544369637 27 3.624600161294707E-4 0.0 0.0 5.436900241942061E-4 0.0012233025544369637 28 3.624600161294707E-4 0.0 0.0 6.796125302427576E-4 0.0012686100564531476 29 3.624600161294707E-4 0.0 0.0 9.967650443560444E-4 0.0012686100564531476 30 3.624600161294707E-4 0.0 0.0 0.0017669925786311697 0.0012686100564531476 31 3.624600161294707E-4 0.0 0.0 0.003443370153229972 0.0012686100564531476 32 3.624600161294707E-4 0.0 0.0 0.00566343775202298 0.0013139175584693313 33 3.624600161294707E-4 0.0 0.0 0.0077022753427512525 0.0013592250604855152 34 3.624600161294707E-4 0.0 0.0 0.009741112933479526 0.0014498400645178828 35 3.624600161294707E-4 0.0 0.0 0.012686100564531476 0.0014498400645178828 36 3.624600161294707E-4 0.0 0.0 0.016673160741955653 0.0014498400645178828 37 4.0776751814565454E-4 0.0 0.0 0.022834981016156657 0.0014498400645178828 38 4.0776751814565454E-4 0.0 0.0 0.033119783973830384 0.0014498400645178828 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2350 0.0 26.876913 1 GGTATCA 1065 0.0 25.623442 1 CGCAATA 365 0.0 25.31593 36 GCGCAAT 410 0.0 23.073433 35 CAATACG 405 0.0 22.816107 38 CTAGCGG 415 0.0 22.79389 29 CGAATGC 435 0.0 20.739155 43 TACGAAT 440 0.0 20.501627 41 AATACGA 460 0.0 20.088549 39 TCTAGCG 475 0.0 19.915113 28 TAGCGGC 485 0.0 19.504051 30 ATACGAA 475 0.0 19.454174 40 ATACCGT 405 0.0 18.468088 6 GTCGTAT 85 1.427913E-4 18.123602 1 TCAACGC 3405 0.0 17.766981 4 ATCAACG 3475 0.0 17.599003 3 CAACGCA 3515 0.0 17.210974 5 CGCCGGT 515 0.0 17.086412 7 AACGCAG 3595 0.0 16.889168 6 TATCAAC 3705 0.0 16.68575 2 >>END_MODULE