##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062098_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 769357 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.268619119602473 32.0 32.0 32.0 32.0 32.0 2 31.42990315289261 32.0 32.0 32.0 32.0 32.0 3 31.557061286242927 32.0 32.0 32.0 32.0 32.0 4 31.63178212455336 32.0 32.0 32.0 32.0 32.0 5 31.605744797278767 32.0 32.0 32.0 32.0 32.0 6 35.24036435620915 36.0 36.0 36.0 36.0 36.0 7 35.23973395965722 36.0 36.0 36.0 36.0 36.0 8 35.1946144637665 36.0 36.0 36.0 36.0 36.0 9 35.278882235425165 36.0 36.0 36.0 36.0 36.0 10 35.15444715522183 36.0 36.0 36.0 36.0 36.0 11 35.27887833606505 36.0 36.0 36.0 36.0 36.0 12 35.19022898342382 36.0 36.0 36.0 36.0 36.0 13 35.23054316786615 36.0 36.0 36.0 36.0 36.0 14 35.191909607633384 36.0 36.0 36.0 36.0 36.0 15 35.17571556507577 36.0 36.0 36.0 36.0 36.0 16 35.18948290585515 36.0 36.0 36.0 36.0 36.0 17 35.16573190339465 36.0 36.0 36.0 36.0 36.0 18 35.161813046479075 36.0 36.0 36.0 36.0 36.0 19 35.14819258159736 36.0 36.0 36.0 36.0 36.0 20 35.14769736286276 36.0 36.0 36.0 36.0 36.0 21 35.13371815685046 36.0 36.0 36.0 36.0 36.0 22 35.12420761752996 36.0 36.0 36.0 36.0 36.0 23 35.09141269917607 36.0 36.0 36.0 36.0 36.0 24 35.07621559302118 36.0 36.0 36.0 36.0 36.0 25 35.044602180782135 36.0 36.0 36.0 36.0 36.0 26 35.02478693246438 36.0 36.0 36.0 36.0 36.0 27 35.00449336263919 36.0 36.0 36.0 36.0 36.0 28 34.98129476952832 36.0 36.0 36.0 36.0 36.0 29 34.97204288776212 36.0 36.0 36.0 36.0 36.0 30 34.94987372572161 36.0 36.0 36.0 32.0 36.0 31 34.95505467552775 36.0 36.0 36.0 36.0 36.0 32 34.922203866345534 36.0 36.0 36.0 32.0 36.0 33 34.90097055073262 36.0 36.0 36.0 32.0 36.0 34 34.879647549837074 36.0 36.0 36.0 32.0 36.0 35 34.86862405879195 36.0 36.0 36.0 32.0 36.0 36 34.843266519964075 36.0 36.0 36.0 32.0 36.0 37 34.83594872081491 36.0 36.0 36.0 32.0 36.0 38 34.813524800580225 36.0 36.0 36.0 32.0 36.0 39 34.80555840786527 36.0 36.0 36.0 32.0 36.0 40 34.80126261280524 36.0 36.0 36.0 32.0 36.0 41 34.76483219103745 36.0 36.0 36.0 32.0 36.0 42 34.73747558025728 36.0 36.0 36.0 32.0 36.0 43 34.741939047802255 36.0 36.0 36.0 32.0 36.0 44 34.680019808749385 36.0 36.0 36.0 32.0 36.0 45 34.66319926899996 36.0 36.0 36.0 32.0 36.0 46 34.65389539576555 36.0 36.0 36.0 32.0 36.0 47 34.624620299808804 36.0 36.0 36.0 32.0 36.0 48 34.60740072554094 36.0 36.0 36.0 32.0 36.0 49 34.58737231220357 36.0 36.0 36.0 32.0 36.0 50 34.17485640606377 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 3.0 21 15.0 22 63.0 23 126.0 24 362.0 25 829.0 26 1753.0 27 3559.0 28 6238.0 29 9958.0 30 14815.0 31 21920.0 32 33622.0 33 57004.0 34 129206.0 35 489883.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.806226214174174 18.02567406446211 12.066264206484698 26.101835514879024 2 16.53115791416609 19.884365864532842 36.64806589689896 26.936410324402104 3 18.71349209856581 22.97498940669705 28.4309953545442 29.880523140192945 4 12.733100498208245 15.767452561034734 35.200693566185784 36.298753374571234 5 14.96808373745868 36.29303431306923 32.71576134356352 16.02312060590857 6 34.97106671033956 34.865393913870825 16.289468074597455 13.874071301192165 7 31.14028987843095 30.053408235708517 19.77911424735201 19.027187638508522 8 28.479236557280952 32.70380330587751 18.832349611428764 19.98461052541278 9 27.25496745983984 14.271528042248265 18.643230645851016 39.83027385206088 10 16.81653226854668 26.187876613687294 30.465870156338546 26.52972096142748 11 37.425018554455214 21.224607041984413 21.72645468878557 19.623919714774807 12 24.70673562468399 23.395510796678266 28.081891761561927 23.815861817075817 13 29.442508484357717 19.15833611704319 25.131245962537545 26.267909436061544 14 23.913605777291945 19.37800007018848 24.65552402850692 32.05287012401265 15 25.632833651997704 26.817719212277265 21.812890504668182 25.736556631056846 16 26.17865424409113 25.75089165947447 23.198353939419146 24.872100157015254 17 24.364371806586536 25.806485155785936 24.719603513063507 25.109539524564017 18 25.074965198210975 24.911452030721758 25.69418358447379 24.31939918659348 19 25.87719355253803 24.838274039230164 25.162180886116587 24.12235152211522 20 26.06413675853571 24.10717535185272 24.54338433702993 25.285303552581638 21 27.014766876755523 23.94675033826949 24.24362162169188 24.794861163283105 22 26.331209048595127 23.966507096185516 24.769645301206072 24.932638554013288 23 24.688408632143467 24.014729182941082 25.402641426541905 25.89422075837355 24 24.933742511506512 24.674691654091067 25.03239760472193 25.359168229680495 25 25.110254693866942 24.2336762612838 25.116753644286447 25.539315400562806 26 24.824690812433793 25.10804505072431 25.23581441597182 24.83144972087008 27 25.48495357131716 24.438228535182855 24.75628840894675 25.320529484553234 28 24.96201294354519 24.427399553643962 25.40394961402031 25.206637888790535 29 24.764737077436596 24.64502594391124 25.181841341804535 25.40839563684763 30 24.858093204201506 24.75787782562524 25.512937662395057 24.871091307778194 31 25.351658664281985 24.58153203856742 24.57542301723264 25.491386279917954 32 25.320758199464745 24.52878992498853 24.523590724105702 25.626861151441023 33 25.094787191868512 24.188183608347252 24.955319715865887 25.76170948391835 34 25.42597591996371 24.491292011058672 25.170435860874946 24.912296208102674 35 26.07427510801242 24.114194209182745 25.11321156915654 24.6983191136483 36 24.81672983638264 24.758759273990194 24.90238589157685 25.522124998050316 37 25.84426371209571 24.737859383184784 24.68859631449855 24.729280590220956 38 25.182067622703112 24.32030903728698 25.085623449191985 25.411999890817917 39 25.798631826730983 24.36793800456751 24.557969290840155 25.275460877861356 40 25.936237580521894 24.449149678432352 24.943849141359784 24.670763599685973 41 24.72041260911837 24.9766035656166 25.413207027249047 24.889776798015983 42 26.113496362329407 24.85509761331893 24.791014297208804 24.24039172714286 43 25.628540455102023 23.958368537491452 24.941961883320637 25.471129124085884 44 25.03139160342851 24.780258776000437 24.735933571987513 25.452416048583544 45 25.22938462918264 25.035452419668264 24.68151313916716 25.05364981198194 46 25.213625220644243 24.815620702474074 24.600500690203788 25.3702533866779 47 25.080002599597062 24.571651394033925 25.169428738545523 25.178917267823486 48 26.044417985566625 25.087478942661644 24.07854647172597 24.789556600045753 49 25.185648310025204 25.132485237173597 24.439675510281013 25.24219094252019 50 25.250830251707622 25.19571843581228 24.400106584172253 25.153344728307847 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 270.0 1 157.0 2 44.0 3 86.5 4 129.0 5 123.0 6 117.0 7 99.0 8 81.0 9 125.5 10 170.0 11 251.0 12 332.0 13 623.5 14 915.0 15 1187.5 16 1460.0 17 1498.5 18 1537.0 19 1501.5 20 1466.0 21 1725.5 22 1985.0 23 2400.0 24 2815.0 25 3456.0 26 4097.0 27 5297.5 28 6498.0 29 7603.0 30 8708.0 31 9919.0 32 11130.0 33 12798.5 34 14467.0 35 16670.5 36 18874.0 37 22564.0 38 26254.0 39 29318.5 40 32383.0 41 35015.0 42 37647.0 43 39232.5 44 40818.0 45 44617.0 46 48416.0 47 52356.0 48 56296.0 49 58454.0 50 60612.0 51 59388.0 52 58164.0 53 57855.5 54 57547.0 55 57971.5 56 58396.0 57 56653.5 58 54911.0 59 49845.5 60 44780.0 61 39385.5 62 33991.0 63 29951.5 64 25912.0 65 21588.5 66 17265.0 67 15188.5 68 13112.0 69 11764.5 70 10417.0 71 8252.0 72 6087.0 73 5351.5 74 4616.0 75 3382.5 76 2149.0 77 1946.5 78 1744.0 79 1483.5 80 1223.0 81 953.5 82 684.0 83 571.0 84 458.0 85 351.5 86 245.0 87 160.0 88 75.0 89 49.0 90 23.0 91 18.0 92 13.0 93 9.0 94 5.0 95 7.5 96 10.0 97 7.5 98 5.0 99 4.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03301458230704341 2 0.004419274797005812 3 3.8993601150051274E-4 4 0.0 5 0.0 6 1.2997867050017092E-4 7 0.0 8 0.0 9 0.0 10 1.2997867050017092E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.498933525008546E-4 17 0.0 18 0.0 19 0.0 20 1.2997867050017092E-4 21 0.0 22 0.0 23 0.0 24 0.0012997867050017092 25 2.5995734100034185E-4 26 2.5995734100034185E-4 27 6.498933525008546E-4 28 0.0020796587280027348 29 6.498933525008546E-4 30 0.001819701387002393 31 3.8993601150051274E-4 32 0.0010398293640013674 33 2.5995734100034185E-4 34 7.798720230010255E-4 35 1.2997867050017092E-4 36 1.2997867050017092E-4 37 0.0023396160690030763 38 0.0 39 0.0012997867050017092 40 1.2997867050017092E-4 41 0.0011698080345015382 42 0.005979018843007862 43 0.004549253467505982 44 0.0055890828315073495 45 0.0020796587280027348 46 0.0024695947395032476 47 9.098506935011965E-4 48 0.0037693814445049567 49 0.003379445433004444 50 0.001559744046002051 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 769357.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.6616960373282 #Duplication Level Percentage of deduplicated Percentage of total 1 81.8014145328713 50.44013958349392 2 11.599026601475265 14.304313052581033 3 2.943458344411174 5.444959011948572 4 1.1968156100280574 2.9519072143311837 5 0.6245664573876003 1.925591352527255 6 0.3641023332647838 1.3470700440153043 7 0.25714128737638564 1.1099037530594962 8 0.17977714224695307 0.8868290799752907 9 0.13886720766964072 0.7706508793990124 >10 0.7523007592717583 8.647628768713377 >50 0.07782094905131932 3.3642044222976066 >100 0.06111384300606498 7.327875420398092 >500 0.003594931939713898 1.4789274172599596 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 910 0.11828059015515553 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 881 0.11451120871065058 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 829 0.10775231784464169 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 2.5995734100034185E-4 13 0.0 0.0 0.0 0.0 2.5995734100034185E-4 14 0.0 0.0 0.0 0.0 2.5995734100034185E-4 15 0.0 0.0 0.0 1.2997867050017092E-4 5.199146820006837E-4 16 0.0 0.0 0.0 1.2997867050017092E-4 6.498933525008546E-4 17 0.0 0.0 0.0 1.2997867050017092E-4 6.498933525008546E-4 18 0.0 0.0 0.0 1.2997867050017092E-4 6.498933525008546E-4 19 0.0 0.0 0.0 1.2997867050017092E-4 6.498933525008546E-4 20 0.0 0.0 0.0 3.8993601150051274E-4 9.098506935011965E-4 21 0.0 0.0 0.0 5.199146820006837E-4 9.098506935011965E-4 22 0.0 0.0 0.0 6.498933525008546E-4 9.098506935011965E-4 23 0.0 0.0 0.0 7.798720230010255E-4 9.098506935011965E-4 24 0.0 0.0 0.0 9.098506935011965E-4 9.098506935011965E-4 25 0.0 0.0 0.0 0.0011698080345015384 9.098506935011965E-4 26 0.0 0.0 0.0 0.001559744046002051 9.098506935011965E-4 27 0.0 0.0 0.0 0.001819701387002393 0.0010398293640013674 28 0.0 0.0 0.0 0.0025995734100034184 0.0010398293640013674 29 0.0 0.0 0.0 0.0038993601150051275 0.0010398293640013674 30 0.0 0.0 0.0 0.007928698900510426 0.0010398293640013674 31 0.0 0.0 0.0 0.013127845720517263 0.0010398293640013674 32 0.0 0.0 0.0 0.018586949881524442 0.0010398293640013674 33 0.0 0.0 0.0 0.024955904736032816 0.0010398293640013674 34 0.0 0.0 0.0 0.03249466762504273 0.0012997867050017092 35 0.0 0.0 0.0 0.041723153230554866 0.0012997867050017092 36 0.0 0.0 0.0 0.05342123357557025 0.0012997867050017092 37 0.0 0.0 0.0 0.07265807680959555 0.0012997867050017092 38 0.0 0.0 0.0 0.0969640881931275 0.0012997867050017092 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACCGC 50 2.3609045E-6 30.798452 6 GTATCAA 895 0.0 24.586163 1 GGTATCA 455 0.0 24.180899 1 CACACCG 55 1.5934266E-4 23.998796 5 ATACCGT 215 0.0 23.5337 6 TACCGTC 220 0.0 22.998846 7 ACCGTCG 225 0.0 22.48776 8 AGTTCGC 60 2.8711758E-4 22.000326 32 TAATACC 70 3.214641E-5 21.998894 4 TGGTCGA 50 0.0025803456 21.998894 10 TATACTT 115 8.763891E-9 21.042421 5 CCGTCGT 235 0.0 20.59471 9 CGTCGTA 250 0.0 20.238985 10 CTATTCC 170 5.456968E-12 19.410791 4 TAGTCGA 80 8.9821406E-5 19.250284 36 GGACCGT 80 8.986625E-5 19.249035 6 CGGTCCA 195 0.0 19.178524 10 GTATAAT 105 1.7873681E-6 18.8611 1 AGTCGAT 70 8.118852E-4 18.85742 37 CTATACT 105 1.791821E-6 18.856195 4 >>END_MODULE