##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062094_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 720078 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.205006957579595 32.0 32.0 32.0 32.0 32.0 2 30.729601515391387 32.0 32.0 32.0 32.0 32.0 3 30.75858587541905 32.0 32.0 32.0 32.0 32.0 4 30.771381711425708 32.0 32.0 32.0 32.0 32.0 5 30.692887437194305 32.0 32.0 32.0 32.0 32.0 6 34.34039784578893 36.0 36.0 36.0 32.0 36.0 7 34.264596335397 36.0 36.0 36.0 32.0 36.0 8 34.21504753651688 36.0 36.0 36.0 32.0 36.0 9 34.33640522276753 36.0 36.0 36.0 32.0 36.0 10 34.02502506672888 36.0 36.0 36.0 32.0 36.0 11 34.3335888612067 36.0 36.0 36.0 32.0 36.0 12 34.147306264043614 36.0 36.0 36.0 32.0 36.0 13 34.22780587658559 36.0 36.0 36.0 32.0 36.0 14 34.141337466218936 36.0 36.0 36.0 32.0 36.0 15 34.08720027552571 36.0 36.0 36.0 32.0 36.0 16 34.10083213207458 36.0 36.0 36.0 32.0 36.0 17 34.03399631706565 36.0 36.0 36.0 32.0 36.0 18 34.045456186690885 36.0 36.0 36.0 32.0 36.0 19 34.00993364607723 36.0 36.0 36.0 32.0 36.0 20 33.99765858698641 36.0 36.0 36.0 32.0 36.0 21 33.963784478903676 36.0 36.0 36.0 32.0 36.0 22 33.934808451306665 36.0 36.0 36.0 32.0 36.0 23 33.89219640094545 36.0 36.0 36.0 32.0 36.0 24 33.85306452912046 36.0 36.0 36.0 32.0 36.0 25 33.50379264468572 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 9.0 5 53.0 6 166.0 7 33.0 8 118.0 9 92.0 10 48.0 11 16.0 12 16.0 13 28.0 14 112.0 15 146.0 16 260.0 17 334.0 18 445.0 19 622.0 20 997.0 21 1464.0 22 2215.0 23 3271.0 24 4556.0 25 6393.0 26 9049.0 27 11461.0 28 15246.0 29 20270.0 30 26239.0 31 36008.0 32 50017.0 33 69867.0 34 149826.0 35 310701.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.761912697619124 17.66976080169761 11.766184492661845 25.802142008021423 2 15.883579117233296 19.524717495490066 39.400369682686716 25.191333704589923 3 19.468605004812055 23.099794880198647 28.42471603336912 29.006884081620182 4 12.585363279172125 15.634761135593761 35.77695340765627 36.002922177577844 5 14.414436942568976 36.89769664638382 33.88374871495652 14.80411769609069 6 34.44002084418968 35.50265763418447 16.64825429911412 13.409067222511725 7 30.10443109243931 30.338678151491816 20.267583821521814 19.289306934547064 8 27.096688089885767 35.28130313229428 19.05623838301268 18.565770394807267 9 26.69568699201686 14.518967947880201 18.84629608517572 39.93904897492722 10 16.434523735033075 27.34350340462395 31.352714035226768 24.869258825116212 11 36.98008146531883 21.08502681902823 22.65300474634915 19.28188696930379 12 24.54473652008499 23.493903863482142 29.717274982479168 22.2440846339537 13 29.942670102103676 20.075336741887533 24.98612986341218 24.995863292596614 14 22.64240132356417 20.681663353121916 25.219041528216106 31.456893795097805 15 24.52419059908808 29.160264370229566 21.86491421038653 24.450630820295824 16 24.640141482479446 26.034389029546425 25.445712911249498 23.87975657672463 17 23.04721226960087 26.924215944307957 26.01700959761749 24.011562188473683 18 23.778918700238147 25.736652666964176 27.718159713388413 22.76626891940926 19 25.452184888434186 25.054490155630553 25.242425590356355 24.250899365578903 20 25.468248088435818 25.39416237974972 25.387212500886108 23.75037703092835 21 25.84095840277324 24.935401773862427 24.44724906768671 24.776390755677625 22 25.295444845893243 25.861103040430173 25.24178447157738 23.601667642099205 23 23.84763884970278 25.725607052665666 25.875155142244417 24.551598955387135 24 24.637010349687674 25.335329324671065 26.10717750701238 23.920482818628884 25 24.414211809445444 25.444987754670876 26.0415479430349 24.099252492848784 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 408.0 1 408.0 2 322.5 3 237.0 4 237.0 5 237.0 6 537.0 7 837.0 8 837.0 9 837.0 10 1014.0 11 1191.0 12 1191.0 13 1191.0 14 1569.5 15 1948.0 16 1948.0 17 1948.0 18 3227.0 19 4506.0 20 4506.0 21 4506.0 22 7800.5 23 11095.0 24 11095.0 25 11095.0 26 17412.5 27 23730.0 28 23730.0 29 23730.0 30 31754.5 31 39779.0 32 39779.0 33 39779.0 34 45689.0 35 51599.0 36 51599.0 37 51599.0 38 57786.5 39 63974.0 40 63974.0 41 63974.0 42 71327.5 43 78681.0 44 78681.0 45 78681.0 46 85128.0 47 91575.0 48 91575.0 49 91575.0 50 92127.0 51 92679.0 52 92679.0 53 92679.0 54 85610.5 55 78542.0 56 78542.0 57 78542.0 58 72211.5 59 65881.0 60 65881.0 61 65881.0 62 57391.5 63 48902.0 64 48902.0 65 48902.0 66 40261.0 67 31620.0 68 31620.0 69 31620.0 70 23934.5 71 16249.0 72 16249.0 73 16249.0 74 12247.5 75 8246.0 76 8246.0 77 8246.0 78 6574.5 79 4903.0 80 4903.0 81 4903.0 82 3401.5 83 1900.0 84 1900.0 85 1900.0 86 1395.5 87 891.0 88 891.0 89 891.0 90 622.0 91 353.0 92 353.0 93 353.0 94 217.5 95 82.0 96 82.0 97 82.0 98 176.0 99 270.0 100 270.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 8.332430653345888E-4 2 1.3887384422243146E-4 3 0.0015276122864467461 4 0.009304547562902908 5 0.03582945180938731 6 0.06290985143276145 7 0.10443313085526847 8 0.10623849083016006 9 0.11276556150861435 10 0.12623632439819021 11 0.13873497037820903 12 0.12970817050375097 13 0.12595857670974533 14 0.11221006613172461 15 0.12984704434797342 16 0.11623740761417514 17 0.11623740761417514 18 0.10790497696082924 19 0.09471196175969825 20 0.08901813414657857 21 0.08762939570435425 22 0.10262777088037685 23 0.08013020811634296 24 0.08832376492546641 25 0.0861017834179075 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 720078.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.47181570354356 #Duplication Level Percentage of deduplicated Percentage of total 1 79.26102892787709 47.13797304871941 2 13.201930949087334 15.702856086700596 3 3.6339432916461614 6.483516171537268 4 1.413113474269123 3.361616964397097 5 0.704839063687875 2.0959029448151747 6 0.3900124941406923 1.3916850704168768 7 0.24206083923486074 1.0077058334014506 8 0.16805479587781688 0.7995619078833724 9 0.1186732937491036 0.6351944629301259 >10 0.709344905223273 8.094834543152333 >50 0.08659551591956723 3.5541883734515305 >100 0.06477025334444679 7.335835659479885 >500 0.0046934966188893505 1.7613151329791292 >1k 9.386993237778702E-4 0.6378138001358654 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1278 0.1774807729162674 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1120 0.15553870552912324 No Hit CTGTAGGACGTGGAATATGGCAAGA 1107 0.15373334555423163 No Hit GTCCTACAGTGGACATTTCTAAATT 1065 0.1479006440968895 No Hit CTTTAGGACGTGAAATATGGCGAGG 876 0.12165348753884996 No Hit TATCAACGCAGAGTACTTTTTTTTT 858 0.1191537583428462 No Hit GCGCAAGACGGACCAGAGCGAAAGC 724 0.10054466321704038 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3887384422243146E-4 2 0.0 0.0 0.0 0.0 1.3887384422243146E-4 3 0.0 0.0 0.0 0.0 1.3887384422243146E-4 4 0.0 0.0 0.0 0.0 1.3887384422243146E-4 5 0.0 0.0 0.0 0.0 1.3887384422243146E-4 6 0.0 0.0 0.0 0.0 1.3887384422243146E-4 7 1.3887384422243146E-4 0.0 0.0 0.0 1.3887384422243146E-4 8 1.3887384422243146E-4 0.0 0.0 0.0 1.3887384422243146E-4 9 1.3887384422243146E-4 0.0 0.0 0.0 1.3887384422243146E-4 10 1.3887384422243146E-4 0.0 0.0 0.0 1.3887384422243146E-4 11 1.3887384422243146E-4 0.0 0.0 0.0 1.3887384422243146E-4 12 1.3887384422243146E-4 0.0 0.0 0.0 1.3887384422243146E-4 13 1.3887384422243146E-4 0.0 0.0 0.0 1.3887384422243146E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 50 8.689713E-5 15.202839 7 CCAACGT 45 6.778613E-4 14.771291 19 CGCGTAA 40 0.0052664913 14.253652 10 GGTGTGC 40 0.0052689225 14.25266 8 TCGCGTA 40 0.0052689225 14.25266 9 ATCGCCA 120 3.6379788E-12 14.248696 16 GATTTAT 40 0.005295729 14.241764 1 GTCTTAG 95 4.9240043E-9 13.991909 1 GGTATCA 320 0.0 13.945061 1 AGAACCG 55 1.9547483E-4 13.820762 5 GATATAC 345 0.0 13.209753 1 TAGGACA 195 0.0 13.1563015 4 CGCATCG 125 1.0186341E-10 12.922412 13 CATCGCC 140 3.6379788E-12 12.893471 15 TAATATA 105 1.9814252E-8 12.669032 4 GGGTCGC 60 4.080841E-4 12.669032 6 TAGAACC 105 1.9814252E-8 12.669032 4 GTCTTCG 135 2.7284841E-11 12.669031 11 TCCAACG 120 7.421477E-10 12.661986 18 GCATCGC 145 7.2759576E-12 12.448868 14 >>END_MODULE