##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062091_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1382418 Sequences flagged as poor quality 0 Sequence length 50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.115962755114587 32.0 32.0 32.0 32.0 32.0 2 31.54060421666963 32.0 32.0 32.0 32.0 32.0 3 31.658107026962902 32.0 32.0 32.0 32.0 32.0 4 31.713794235896813 32.0 32.0 32.0 32.0 32.0 5 31.738291168083748 32.0 32.0 32.0 32.0 32.0 6 35.387348833710206 36.0 36.0 36.0 36.0 36.0 7 35.412707299818145 36.0 36.0 36.0 36.0 36.0 8 35.36732160605548 36.0 36.0 36.0 36.0 36.0 9 35.45320879791785 36.0 36.0 36.0 36.0 36.0 10 35.34828322547884 36.0 36.0 36.0 36.0 36.0 11 35.43358882769177 36.0 36.0 36.0 36.0 36.0 12 35.385175829597124 36.0 36.0 36.0 36.0 36.0 13 35.39213754450535 36.0 36.0 36.0 36.0 36.0 14 35.374053289236684 36.0 36.0 36.0 36.0 36.0 15 35.340610437653446 36.0 36.0 36.0 36.0 36.0 16 35.36969353697651 36.0 36.0 36.0 36.0 36.0 17 35.37528663544601 36.0 36.0 36.0 36.0 36.0 18 35.348236929785344 36.0 36.0 36.0 36.0 36.0 19 35.28627954786468 36.0 36.0 36.0 36.0 36.0 20 35.250317921207625 36.0 36.0 36.0 36.0 36.0 21 35.209310063960395 36.0 36.0 36.0 36.0 36.0 22 35.1249491832427 36.0 36.0 36.0 36.0 36.0 23 35.138785808633855 36.0 36.0 36.0 36.0 36.0 24 35.13601240724586 36.0 36.0 36.0 36.0 36.0 25 35.03015079375413 36.0 36.0 36.0 36.0 36.0 26 35.05410592165322 36.0 36.0 36.0 36.0 36.0 27 34.95948692797692 36.0 36.0 36.0 36.0 36.0 28 34.85194998907711 36.0 36.0 36.0 36.0 36.0 29 34.76558537287564 36.0 36.0 36.0 32.0 36.0 30 34.676530542860405 36.0 36.0 36.0 32.0 36.0 31 34.67668823756635 36.0 36.0 36.0 32.0 36.0 32 34.598568595026975 36.0 36.0 36.0 32.0 36.0 33 34.689509251181626 36.0 36.0 36.0 32.0 36.0 34 34.64696640234719 36.0 36.0 36.0 32.0 36.0 35 34.62826077206749 36.0 36.0 36.0 32.0 36.0 36 34.484581363957936 36.0 36.0 36.0 32.0 36.0 37 34.3096979350674 36.0 36.0 36.0 32.0 36.0 38 34.270565776776635 36.0 36.0 36.0 32.0 36.0 39 33.92098048491845 36.0 36.0 36.0 32.0 36.0 40 34.153797910617484 36.0 36.0 36.0 32.0 36.0 41 34.1593454367637 36.0 36.0 36.0 32.0 36.0 42 34.15102667934011 36.0 36.0 36.0 32.0 36.0 43 34.222471061574716 36.0 36.0 36.0 32.0 36.0 44 34.02632271859886 36.0 36.0 36.0 32.0 36.0 45 33.993457839814006 36.0 36.0 36.0 32.0 36.0 46 33.68607396605079 36.0 36.0 36.0 27.0 36.0 47 33.74034336937164 36.0 36.0 36.0 27.0 36.0 48 33.66914999660016 36.0 36.0 36.0 27.0 36.0 49 33.56842792845579 36.0 36.0 36.0 21.0 36.0 50 33.3743368503593 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 7.0 20 11.0 21 29.0 22 106.0 23 268.0 24 762.0 25 1934.0 26 4707.0 27 9208.0 28 15846.0 29 24216.0 30 34175.0 31 48419.0 32 70534.0 33 116816.0 34 246019.0 35 809360.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.63506306488845 20.549239820248786 12.997011382796275 25.818685732066488 2 10.681840870520116 20.777214966441107 49.64777269945441 18.89317146358437 3 20.206711168595177 25.70977393136055 30.118228140380726 23.965286759663545 4 10.036761674110146 18.07825129591773 41.07324991428063 30.81173711569149 5 9.60252948278269 41.80750092048926 37.366293961952145 11.223675634775903 6 29.636129263737203 40.70813808309233 18.542419275267758 11.113313377902712 7 26.39064306164995 31.533443574953452 22.117622889748255 19.958290473648347 8 21.03061447405922 46.47328087452565 19.40621432880648 13.089890322608646 9 25.986062102779332 14.491203094867108 20.858307689859362 38.664427112494195 10 15.423844307582801 30.1455131515938 35.36180807830917 19.068834462514232 11 33.95998894690318 20.228758595446532 29.62555464410909 16.1856978135412 12 25.959080393918484 23.39393728958969 35.25525564626618 15.391726670225648 13 31.938603229992662 23.479656659563172 26.143829145743187 18.43791096470098 14 17.588384989200083 27.51823254616187 27.0761086733535 27.817273791284546 15 19.33004344561486 41.659035110943286 21.896850301428366 17.114071142013486 16 17.151339218220922 28.00469614318752 36.887510299035526 17.956454339556036 17 17.248400990149147 32.8122897705325 31.63898328870139 18.300325950616962 18 17.27734829649809 27.901060244484842 39.376179546403144 15.44541191261392 19 24.752209534308726 24.892688029235728 27.0769767176064 23.278125718849147 20 23.856925431781555 30.259647630373575 29.95069487244034 15.932732065404526 21 20.66829328632388 27.31751707335775 26.381185995253244 25.633003645065127 22 22.261645898707915 34.08513199336235 27.492914588785737 16.160307519143995 23 18.886183484300698 33.31127054190556 29.965176958054656 17.83736901573909 24 24.10856184276487 27.682778007249702 31.71178261589799 16.49687753408743 25 20.535614176081967 31.18076869936842 31.51055437123349 16.773062753316122 26 15.088555365549489 33.76750201821165 33.81632971936008 17.32761289687879 27 17.191172247367465 32.17193414703131 32.02906801368332 18.6078255919179 28 16.6064809590361 33.771632855609276 27.89448403776653 21.727402147588087 29 19.382483318962272 28.389013952465554 27.24130647392087 24.987196254651302 30 16.912676912170543 30.263491983116257 30.91525938678887 21.90857171792433 31 23.083600379048182 27.32192330784644 29.512445656498432 20.08203065660694 32 18.7667868678137 32.43745501499199 30.12149116937511 18.6742669478192 33 17.304030925657475 32.71817663619818 33.29217338969859 16.68561904844576 34 18.719857871295687 32.573572654691915 32.84368084987872 15.862888624133667 35 17.00748328106972 33.85647580502237 32.07538980696824 17.060651106939666 36 15.67720257665028 31.880513449289833 33.856114119132094 18.58616985492779 37 17.17409263007432 30.995108514021247 28.491133548707246 23.339665307197183 38 19.356952817454633 34.494197847539596 27.581238091517907 18.56761124348786 39 22.50153355594007 28.09814468666269 29.838730678641905 19.56159107875533 40 24.976255355656072 28.129934744726086 30.662455684500404 16.231354215117435 41 23.206513286627292 26.03281961509109 33.8348023914844 16.92586470679721 42 19.8630875260337 33.83089435834666 30.965614178246643 15.340403937372995 43 16.271617048550375 33.83298682396311 32.95072622287425 16.944669904612265 44 15.806740275777356 33.86841364722461 30.788289770947525 19.536556306050507 45 16.43719576991326 33.93748331685213 30.174199190817596 19.451121722417014 46 18.310166849322005 28.3314706105752 30.61759206009903 22.74077048000376 47 23.19945254590028 28.792917240246847 29.41249234121263 18.595137872640244 48 17.630412184318637 30.37283152737298 28.928280261319895 23.068476026988492 49 21.783062770053885 29.010108054107352 29.391918041787868 19.8149111340509 50 18.018728366349706 34.80893666426745 26.861208265365544 20.311126704017305 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 399.0 1 218.0 2 37.0 3 87.0 4 137.0 5 145.5 6 154.0 7 134.0 8 114.0 9 167.0 10 220.0 11 375.5 12 531.0 13 945.5 14 1360.0 15 1927.5 16 2495.0 17 2856.0 18 3217.0 19 3529.5 20 3842.0 21 4781.0 22 5720.0 23 7322.0 24 8924.0 25 14038.5 26 19153.0 27 32042.0 28 44931.0 29 56501.0 30 68071.0 31 82033.5 32 95996.0 33 120578.5 34 145161.0 35 170417.5 36 195674.0 37 190312.0 38 184950.0 39 161170.5 40 137391.0 41 115372.5 42 93354.0 43 78666.5 44 63979.0 45 58068.0 46 52157.0 47 49273.0 48 46389.0 49 44279.0 50 42169.0 51 38646.0 52 35123.0 53 32367.5 54 29612.0 55 27647.0 56 25682.0 57 23159.0 58 20636.0 59 18455.5 60 16275.0 61 13756.0 62 11237.0 63 9472.0 64 7707.0 65 6786.5 66 5866.0 67 5379.0 68 4892.0 69 4221.0 70 3550.0 71 2692.5 72 1835.0 73 1629.5 74 1424.0 75 1071.5 76 719.0 77 604.5 78 490.0 79 421.0 80 352.0 81 279.0 82 206.0 83 172.0 84 138.0 85 106.0 86 74.0 87 51.0 88 28.0 89 21.5 90 15.0 91 11.0 92 7.0 93 7.5 94 8.0 95 5.5 96 3.0 97 4.0 98 5.0 99 7.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0367472067059312 2 0.005208265517376076 3 4.340221264480063E-4 4 0.0 5 7.233702107466772E-5 6 2.893480842986709E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.06359147522674E-4 17 0.0 18 7.233702107466772E-5 19 0.0 20 4.340221264480063E-4 21 7.233702107466772E-5 22 0.0 23 0.0 24 0.0012297293582693514 25 3.6168510537333857E-4 26 4.340221264480063E-4 27 3.6168510537333857E-4 28 0.002170110632240032 29 7.233702107466771E-4 30 0.0016637514847173574 31 5.786961685973418E-4 32 9.403812739706805E-4 33 4.340221264480063E-4 34 6.510331896720095E-4 35 2.1701106322400315E-4 36 2.1701106322400315E-4 37 0.0011573923371946836 38 0.0 39 7.233702107466771E-4 40 7.233702107466772E-5 41 9.403812739706805E-4 42 0.005425276580600079 43 0.004340221264480064 44 0.0051359284963014085 45 0.00253179573761337 46 0.0023871216954640347 47 0.0013744034004186867 48 0.0036891880748080538 49 0.003978536159106725 50 0.0016637514847173574 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1382418.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.51222224226277 #Duplication Level Percentage of deduplicated Percentage of total 1 71.68312513591181 33.34141447341462 2 14.86324222395094 13.826448511219802 3 5.60322830644384 7.818558007903606 4 2.609093238718173 4.854188982801793 5 1.4327434807603272 3.332004159663874 6 0.8580148818918578 2.3944907324233764 7 0.5712897154841811 1.860036794792351 8 0.39700874943648823 1.4772607348730205 9 0.28784702372981824 1.2049564265545674 >10 1.483658108311013 12.57438302736168 >50 0.1225759439378716 3.95029736808451 >100 0.0778550728683573 7.16388515321901 >500 0.006409740314651665 2.13461986477673 >1k 0.0035957079813899585 3.198148620132516 >5k 3.1267025925130074E-4 0.8693071427785056 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 6815 0.4929767986238605 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 5140 0.37181228832379204 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 4531 0.3277590424893194 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 4092 0.2960030902375403 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 3450 0.24956272270760363 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 2594 0.18764223266768806 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 2518 0.1821446190660133 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 2303 0.16659215953495976 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 2233 0.161528568059733 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 2141 0.1548735621208636 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 2113 0.1528481255307729 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 1816 0.13136403027159657 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1613 0.11667961499343903 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 1524 0.1102416201177936 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1458 0.10546737672686554 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 1454 0.10517802864256685 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 1.4467404214933544E-4 0.0 13 0.0 0.0 0.0 1.4467404214933544E-4 0.0 14 0.0 0.0 0.0 1.4467404214933544E-4 0.0 15 0.0 0.0 0.0 2.1701106322400315E-4 0.0 16 0.0 0.0 0.0 3.616851053733386E-4 0.0 17 0.0 0.0 0.0 3.616851053733386E-4 0.0 18 0.0 0.0 0.0 3.616851053733386E-4 0.0 19 0.0 0.0 0.0 4.340221264480063E-4 0.0 20 0.0 0.0 0.0 7.957072318213449E-4 0.0 21 0.0 0.0 0.0 0.0011573923371946836 0.0 22 0.0 0.0 0.0 0.0015190774425680221 0.0 23 0.0 0.0 0.0 0.0015190774425680221 0.0 24 0.0 0.0 0.0 0.0022424476533146995 0.0 25 0.0 0.0 0.0 0.0031828289272853795 0.0 26 0.0 0.0 0.0 0.004050873180181392 0.0 27 0.0 0.0 0.0 0.004846580412002737 0.0 28 0.0 0.0 0.0 0.006293320833496091 0.0 29 0.0 0.0 0.0 0.00853576848681079 0.0 30 0.0 0.0 0.0 0.011067564224424162 0.0 31 0.0 0.0 0.0 0.016348166762874906 0.0 32 0.0 0.0 0.0 0.022062791427773655 0.0 33 0.0 0.0 0.0 0.026258338650104383 0.0 34 0.0 0.0 0.0 0.03161127820962979 0.0 35 0.0 0.0 0.0 0.03768758797990188 0.0 36 0.0 0.0 0.0 0.04672971561423535 0.0 37 0.0 0.0 0.0 0.05866532409155552 0.0 38 0.0 0.0 0.0 0.0757368610651771 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACC 2830 0.0 29.772652 4 GGTATCA 1030 0.0 28.636778 1 GTGTAGG 380 0.0 27.225185 1 TTCGTAA 85 8.22547E-9 25.885992 44 GTATCAA 2615 0.0 25.420952 1 TGTAGGA 7920 0.0 25.001707 2 AGGACCT 4700 0.0 24.667091 5 CTGTAGG 7655 0.0 24.585413 1 TACCGTC 45 0.0013986434 24.44346 7 GACGTGT 100 1.7462298E-9 24.199024 7 GGACCTG 4585 0.0 24.08627 6 GGCGATA 55 1.5942146E-4 23.999033 19 GTAGGAC 8200 0.0 23.66246 3 TGTGGCG 115 3.5106495E-10 22.955597 16 CCTACAC 445 0.0 22.740656 3 TAGGACA 1710 0.0 22.513714 4 GGACCTA 235 0.0 22.467182 6 ACTGTTC 2435 0.0 22.315321 8 GTCCTAC 7725 0.0 22.140076 1 GATATAC 2610 0.0 22.09619 1 >>END_MODULE