##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062090_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 969474 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.311269822604835 32.0 32.0 32.0 32.0 32.0 2 30.946036716817574 32.0 32.0 32.0 32.0 32.0 3 30.970667599131076 32.0 32.0 32.0 32.0 32.0 4 30.972434536666274 32.0 32.0 32.0 32.0 32.0 5 30.93978281005989 32.0 32.0 32.0 32.0 32.0 6 34.58975279378302 36.0 36.0 36.0 32.0 36.0 7 34.51390547864099 36.0 36.0 36.0 32.0 36.0 8 34.47784984434858 36.0 36.0 36.0 32.0 36.0 9 34.57481582796444 36.0 36.0 36.0 32.0 36.0 10 34.34494684746574 36.0 36.0 36.0 32.0 36.0 11 34.57020817474218 36.0 36.0 36.0 32.0 36.0 12 34.422364086092045 36.0 36.0 36.0 32.0 36.0 13 34.481669441367174 36.0 36.0 36.0 32.0 36.0 14 34.421193348145486 36.0 36.0 36.0 32.0 36.0 15 34.389082120820156 36.0 36.0 36.0 32.0 36.0 16 34.37659803150987 36.0 36.0 36.0 32.0 36.0 17 34.32122367386851 36.0 36.0 36.0 32.0 36.0 18 34.32535065406602 36.0 36.0 36.0 32.0 36.0 19 34.31263757460231 36.0 36.0 36.0 32.0 36.0 20 34.29109393341131 36.0 36.0 36.0 32.0 36.0 21 34.253214629788935 36.0 36.0 36.0 32.0 36.0 22 34.227812195066605 36.0 36.0 36.0 32.0 36.0 23 34.20645009561886 36.0 36.0 36.0 32.0 36.0 24 34.18844961288286 36.0 36.0 36.0 32.0 36.0 25 33.84340580562243 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 17.0 5 86.0 6 207.0 7 39.0 8 202.0 9 138.0 10 71.0 11 22.0 12 38.0 13 31.0 14 194.0 15 260.0 16 413.0 17 462.0 18 679.0 19 845.0 20 1208.0 21 1648.0 22 2533.0 23 3430.0 24 4733.0 25 6895.0 26 9538.0 27 12126.0 28 16308.0 29 21986.0 30 29008.0 31 40483.0 32 58492.0 33 84643.0 34 197664.0 35 475075.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.68455347113414 18.002881995983362 11.812160702736659 25.500403830145846 2 16.149289356175984 19.680898797594157 38.44841475729597 25.721397088933884 3 19.180003878415793 23.355489815032573 28.507387556886872 28.95711874966476 4 12.561083676254711 15.74769927179283 35.695562155509734 35.99565489644273 5 14.705809516537444 36.68543256144145 33.3553461131278 15.253411808893299 6 34.24854924515331 35.42411999925682 16.73730344362029 13.59002731196958 7 30.12550832212908 30.33317430518122 20.338358209879985 19.20295916280972 8 27.566140188904104 34.28322396888638 19.203013047312776 18.94762279489674 9 26.97053009474904 14.342488757975797 19.07601611993696 39.61096502733821 10 16.85273828978004 26.900192751470424 30.752743041424008 25.49432591732553 11 37.04413040783439 21.044171728440975 22.585430354117598 19.32626750960704 12 24.554908709286906 23.73610187208971 29.039598560503084 22.66939085812031 13 29.74484879220716 19.694248226811172 25.111473076553626 25.44942990442804 14 23.014114006803972 20.610209262407334 24.991686100192304 31.383990630596394 15 24.665845828392467 28.75275276929624 21.772907378867824 24.808494023443473 16 24.87198342549425 26.10711873369454 24.904620164133874 24.116277676677335 17 23.35618730478756 26.62150270198807 25.695534696170945 24.32677529705343 18 24.019592656161898 25.40787052240887 27.34720475213824 23.225332069291 19 25.63038486002462 24.968300056997943 25.252153944009848 24.149161138967592 20 25.626162859131167 24.941095570758623 25.172067013726124 24.260674556384085 21 26.30414940672611 24.50419401068017 24.45876405747302 24.7328925251207 22 25.69416764936092 25.247773190723915 25.103931534262813 23.954127625652347 23 23.923589710235152 25.2368076827381 25.861102421710218 24.97850018531653 24 24.589766172138688 25.283908756851858 26.01594370042115 24.110381370588303 25 24.51373839388868 25.174511105627616 25.841375315802896 24.470375184680808 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 959.0 1 959.0 2 698.0 3 437.0 4 437.0 5 437.0 6 916.5 7 1396.0 8 1396.0 9 1396.0 10 1603.5 11 1811.0 12 1811.0 13 1811.0 14 2301.5 15 2792.0 16 2792.0 17 2792.0 18 4604.0 19 6416.0 20 6416.0 21 6416.0 22 10658.0 23 14900.0 24 14900.0 25 14900.0 26 23196.0 27 31492.0 28 31492.0 29 31492.0 30 40566.0 31 49640.0 32 49640.0 33 49640.0 34 58005.5 35 66371.0 36 66371.0 37 66371.0 38 74122.0 39 81873.0 40 81873.0 41 81873.0 42 92405.5 43 102938.0 44 102938.0 45 102938.0 46 113032.0 47 123126.0 48 123126.0 49 123126.0 50 124718.0 51 126310.0 52 126310.0 53 126310.0 54 116262.0 55 106214.0 56 106214.0 57 106214.0 58 98295.0 59 90376.0 60 90376.0 61 90376.0 62 80091.0 63 69806.0 64 69806.0 65 69806.0 66 57118.5 67 44431.0 68 44431.0 69 44431.0 70 33685.5 71 22940.0 72 22940.0 73 22940.0 74 17564.0 75 12188.0 76 12188.0 77 12188.0 78 9988.5 79 7789.0 80 7789.0 81 7789.0 82 5339.0 83 2889.0 84 2889.0 85 2889.0 86 2150.0 87 1411.0 88 1411.0 89 1411.0 90 952.0 91 493.0 92 493.0 93 493.0 94 294.5 95 96.0 96 96.0 97 96.0 98 238.0 99 380.0 100 380.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 7.220410243080268E-4 2 1.0314871775828954E-4 3 6.188923065497373E-4 4 0.01103691280013698 5 0.03507056403781844 6 0.06890334346253742 7 0.11263839979205219 8 0.11882732285754957 9 0.12707922027821272 10 0.1431704202485059 11 0.1479152612653872 12 0.1400759587157572 13 0.13440277923905128 14 0.1254288407940801 15 0.1400759587157572 16 0.12790441002027902 17 0.13388703565025983 18 0.11882732285754957 19 0.10500539467793875 20 0.0986101741769248 21 0.09799128187037508 22 0.10809985621068743 23 0.0888110459898873 24 0.09706294341055047 25 0.09396848187780178 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 969474.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.16037165415753 #Duplication Level Percentage of deduplicated Percentage of total 1 75.34294629817589 38.54573134133911 2 14.806139973840729 15.1497524765034 3 4.592025715506763 7.047892267523241 4 1.898920308411201 3.8859787487977795 5 0.9095661713272989 2.326687168457687 6 0.5411191258267993 1.6610313351883135 7 0.3463050421272414 1.2401966262656847 8 0.22004084507922564 0.9005897130678469 9 0.1720321194759427 0.7921104451957496 >10 0.947030586712098 9.235178547281963 >50 0.1128536455739319 4.0654802154138165 >100 0.09762468157936834 9.901599982041125 >500 0.011568829132201221 4.054694690626289 >1k 0.001826657231400193 1.1930764422980376 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2259 0.23301295341597608 No Hit TATCAACGCAGAGTACTTTTTTTTT 1487 0.15338214330657657 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1323 0.13646575359421706 No Hit GATTAAGAGGGACGGCCGGGGGCAT 1112 0.11470137414721798 No Hit GAATAGGACCGCGGTTCTATTTTGT 1111 0.11459822542945969 No Hit GTCCTAAAGTGTGTATTTCTCATTT 1086 0.11201950748550246 No Hit ATCAGATACCGTCGTAGTTCCGACC 1044 0.1076872613396543 No Hit GTCCTACAGTGGACATTTCTAAATT 1041 0.10737781518637941 No Hit GTATCTGATCGTCTTCGAACCTCCG 1027 0.10593373313776337 No Hit TCGTAGTTCCGACCATAAACGATGC 996 0.10273612288725639 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 990 0.10211723058070667 No Hit GAATAACGCCGCCGCATCGCCAGTC 972 0.10026055366105745 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 2.062974355165791E-4 11 0.0 0.0 0.0 0.0 2.062974355165791E-4 12 0.0 0.0 0.0 0.0 3.0944615327486866E-4 13 0.0 0.0 0.0 0.0 4.125948710331582E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 60 1.4665802E-6 15.832129 16 GCGTTAT 115 2.5465852E-11 14.040235 1 GATAACG 75 9.642026E-7 13.935873 11 GTCTAAC 55 1.9627946E-4 13.814989 1 TCCAACG 120 5.0931703E-11 13.456614 18 ACTCTAA 165 0.0 13.245522 10 TCCTATA 65 5.449594E-5 13.153524 2 CTAAACT 95 7.377821E-8 12.999682 4 GTCCTAT 205 0.0 12.97261 1 CGCCAGT 230 0.0 12.802712 18 TCGCCAG 230 0.0 12.80139 17 ACGAACG 75 1.4768055E-5 12.667011 15 GTCGGCG 85 3.9377737E-6 12.294452 12 CGTTATT 125 1.4078978E-9 12.159702 2 CGCGCAG 55 0.0030616396 12.093737 10 TCGAACG 55 0.0030675705 12.090613 3 TAGTACT 55 0.0030675705 12.090613 4 TAGAAAT 150 1.4551915E-11 12.033038 4 GGTATCA 665 0.0 11.997227 1 CCGTCGT 200 0.0 11.876551 9 >>END_MODULE