##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062089_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 361069 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.352018589244715 32.0 32.0 32.0 32.0 32.0 2 30.988597747244988 32.0 32.0 32.0 32.0 32.0 3 31.003517333252095 32.0 32.0 32.0 32.0 32.0 4 30.98996867634718 32.0 32.0 32.0 32.0 32.0 5 30.94666393404031 32.0 32.0 32.0 32.0 32.0 6 34.6048677676566 36.0 36.0 36.0 32.0 36.0 7 34.562795476764826 36.0 36.0 36.0 32.0 36.0 8 34.51363312829404 36.0 36.0 36.0 32.0 36.0 9 34.63155518751264 36.0 36.0 36.0 32.0 36.0 10 34.35320672779995 36.0 36.0 36.0 32.0 36.0 11 34.61892048334252 36.0 36.0 36.0 32.0 36.0 12 34.469940648463314 36.0 36.0 36.0 32.0 36.0 13 34.53199250004847 36.0 36.0 36.0 32.0 36.0 14 34.45712315374624 36.0 36.0 36.0 32.0 36.0 15 34.4224261844689 36.0 36.0 36.0 32.0 36.0 16 34.414987163118404 36.0 36.0 36.0 32.0 36.0 17 34.37236096147828 36.0 36.0 36.0 32.0 36.0 18 34.35641110147922 36.0 36.0 36.0 32.0 36.0 19 34.36704341829401 36.0 36.0 36.0 32.0 36.0 20 34.3394171197195 36.0 36.0 36.0 32.0 36.0 21 34.330665329895396 36.0 36.0 36.0 32.0 36.0 22 34.294204154884525 36.0 36.0 36.0 32.0 36.0 23 34.270222589034226 36.0 36.0 36.0 32.0 36.0 24 34.24146631253306 36.0 36.0 36.0 32.0 36.0 25 33.908009272465925 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 4.0 5 26.0 6 71.0 7 18.0 8 62.0 9 67.0 10 22.0 11 7.0 12 17.0 13 14.0 14 51.0 15 55.0 16 81.0 17 150.0 18 207.0 19 260.0 20 405.0 21 606.0 22 843.0 23 1196.0 24 1767.0 25 2541.0 26 3511.0 27 4554.0 28 6078.0 29 8122.0 30 10436.0 31 14602.0 32 21075.0 33 31056.0 34 72549.0 35 180616.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.267472615734015 16.810823535928435 11.74497666625123 26.176727182086328 2 16.954424097399936 18.915273577276302 37.569377513376985 26.56092481194678 3 19.645992699395677 21.660028914381304 28.19706092514942 30.496917461073597 4 13.417664019676545 15.534332856007246 34.681848775340065 36.366154348976146 5 15.374535259340524 35.34106839098611 33.52698681826493 15.757409531408435 6 35.17880104642398 34.387054937258895 16.494756795104866 13.939387221212254 7 31.58615603434652 29.737687737227493 19.557110655794517 19.119045572631467 8 28.22465043932492 33.925476963514825 18.37955787471546 19.470314722444805 9 27.34650983523827 15.000194098302472 18.095784739436894 39.55751132702237 10 17.247949148875986 26.40092960824445 30.86537874880055 25.485742494079016 11 36.70770570598889 21.44024007699327 21.95583981184354 19.8962144051743 12 24.88359129520804 23.10009068647163 28.420363688803963 23.595954329516367 13 29.894559936103654 19.58545026956271 24.351052736671623 26.168937057662017 14 23.289274118191823 19.20249770553804 24.956814205422972 32.551413970847165 15 25.243703911187776 26.620371012338424 21.915186878953687 26.220738197520117 16 25.645533396925398 25.9477805630116 23.386443798664565 25.02024224139843 17 24.546619193398108 25.83521895381339 24.80894227782954 24.80921957495896 18 24.603086580638724 25.58074408442347 25.617621125831118 24.198548209106686 19 25.99089021404947 25.2237941177286 24.369093263027743 24.416222405194183 20 25.771432531706978 24.963614942130434 24.95668445491718 24.308268071245408 21 26.081990663221745 24.602466151406617 24.30972155997383 25.00582162539781 22 26.036990931094618 24.341596360238768 24.64629605498457 24.975116653682043 23 25.17428629243507 24.718855074191215 24.869649098977984 25.237209534395728 24 25.01268293223849 24.652016378308996 24.958070087408274 25.377230602044236 25 25.167714535999025 24.715023895856202 24.95647738487298 25.16078418327179 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 16.0 1 16.0 2 62.5 3 109.0 4 109.0 5 109.0 6 218.0 7 327.0 8 327.0 9 327.0 10 385.5 11 444.0 12 444.0 13 444.0 14 573.5 15 703.0 16 703.0 17 703.0 18 1331.0 19 1959.0 20 1959.0 21 1959.0 22 3066.0 23 4173.0 24 4173.0 25 4173.0 26 6538.0 27 8903.0 28 8903.0 29 8903.0 30 11238.0 31 13573.0 32 13573.0 33 13573.0 34 17274.0 35 20975.0 36 20975.0 37 20975.0 38 25444.0 39 29913.0 40 29913.0 41 29913.0 42 33957.0 43 38001.0 44 38001.0 45 38001.0 46 42102.0 47 46203.0 48 46203.0 49 46203.0 50 47699.0 51 49195.0 52 49195.0 53 49195.0 54 47698.5 55 46202.0 56 46202.0 57 46202.0 58 41835.0 59 37468.0 60 37468.0 61 37468.0 62 32573.5 63 27679.0 64 27679.0 65 27679.0 66 22457.5 67 17236.0 68 17236.0 69 17236.0 70 13027.5 71 8819.0 72 8819.0 73 8819.0 74 6729.0 75 4639.0 76 4639.0 77 4639.0 78 3568.5 79 2498.0 80 2498.0 81 2498.0 82 1819.5 83 1141.0 84 1141.0 85 1141.0 86 822.0 87 503.0 88 503.0 89 503.0 90 353.5 91 204.0 92 204.0 93 204.0 94 128.0 95 52.0 96 52.0 97 52.0 98 93.0 99 134.0 100 134.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0011078214967222332 2 2.769553741805583E-4 3 8.308661225416749E-4 4 0.008308661225416748 5 0.03184986803076421 6 0.06120713769390339 7 0.10856650667877885 8 0.11133606042058443 9 0.1182599447750984 10 0.13487726722593188 11 0.14346288382552919 12 0.1346003118517513 13 0.13432335647757077 14 0.11576734640747337 15 0.13515422260011242 16 0.12102949851690396 17 0.12324514151034845 18 0.11382865878820947 19 0.09915002395663985 20 0.09527264871811206 21 0.09554960409229261 22 0.1069047744336955 23 0.08641007674433418 24 0.09638047021483429 25 0.09333396109884814 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 361069.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.615053300268954 #Duplication Level Percentage of deduplicated Percentage of total 1 61.18117439567962 28.519637054276558 2 17.392131506413698 16.214702743535234 3 8.297549002679412 11.60372067064483 4 4.463921648439413 8.323437822809108 5 2.672564978612977 6.229087946323803 6 1.6832376277904988 4.707852704188342 7 1.0548720664324245 3.442104232119862 8 0.7762703082055 2.8948705433932473 9 0.5440629636809251 2.282537164561975 >10 1.881109372556404 13.310954478588528 >50 0.035205186977970815 1.1454263536359672 >100 0.017304244446799146 1.1735196177732228 >500 5.966980843723843E-4 0.1521486681493133 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 547 0.15149458967676538 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATAA 25 0.0060187317 19.002495 9 AACGAAC 25 0.0060187317 19.002495 14 CGATAAC 25 0.0060187317 19.002495 10 TAGACAC 40 2.7568178E-4 16.622576 5 ATTCCGA 35 0.0021679704 16.28334 6 GGTTAAT 35 0.0021699788 16.281082 1 CTGTAGG 60 1.4635407E-6 15.82883 1 TTGGACT 80 7.663402E-9 15.435248 4 TAGGACT 45 6.752008E-4 14.775621 4 GGTATCA 90 2.2737368E-9 14.773574 1 CTCCTAG 60 2.5643667E-5 14.245947 1 CTAGGAC 75 9.629421E-7 13.931301 3 TCAAGAC 55 1.9560134E-4 13.816166 3 CTAAGGC 50 0.001497304 13.298059 3 TGCACTG 50 0.001497304 13.298059 5 GTATCAA 335 0.0 13.041065 1 CTAGACA 60 4.0835328E-4 12.664818 4 TAGGAGG 60 4.0835328E-4 12.664818 4 TCCTAGA 85 3.932155E-6 12.290621 2 TTAATTC 55 0.0030639467 12.089146 3 >>END_MODULE