##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062088_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 344610 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.158071443080583 32.0 32.0 32.0 32.0 32.0 2 31.495226487913875 32.0 32.0 32.0 32.0 32.0 3 31.612222512405328 32.0 32.0 32.0 32.0 32.0 4 31.69113200429471 32.0 32.0 32.0 32.0 32.0 5 31.67305649865065 32.0 32.0 32.0 32.0 32.0 6 35.3111314239285 36.0 36.0 36.0 36.0 36.0 7 35.309332288674156 36.0 36.0 36.0 36.0 36.0 8 35.28734801659847 36.0 36.0 36.0 36.0 36.0 9 35.296718029076345 36.0 36.0 36.0 36.0 36.0 10 35.24357969878994 36.0 36.0 36.0 36.0 36.0 11 35.34395113316503 36.0 36.0 36.0 36.0 36.0 12 35.281355735469084 36.0 36.0 36.0 36.0 36.0 13 35.30961956994864 36.0 36.0 36.0 36.0 36.0 14 35.2652070456458 36.0 36.0 36.0 36.0 36.0 15 35.268558660514785 36.0 36.0 36.0 36.0 36.0 16 35.26044223905284 36.0 36.0 36.0 36.0 36.0 17 35.2537245001596 36.0 36.0 36.0 36.0 36.0 18 35.24353907315516 36.0 36.0 36.0 36.0 36.0 19 35.21878935608369 36.0 36.0 36.0 36.0 36.0 20 35.18841008676475 36.0 36.0 36.0 36.0 36.0 21 35.165674240445725 36.0 36.0 36.0 36.0 36.0 22 35.17460317460318 36.0 36.0 36.0 36.0 36.0 23 35.149026435680916 36.0 36.0 36.0 36.0 36.0 24 35.149513943298224 36.0 36.0 36.0 36.0 36.0 25 35.146365456603114 36.0 36.0 36.0 36.0 36.0 26 35.11793041409129 36.0 36.0 36.0 36.0 36.0 27 35.07765009721134 36.0 36.0 36.0 36.0 36.0 28 35.08274281071356 36.0 36.0 36.0 36.0 36.0 29 35.06115028583036 36.0 36.0 36.0 36.0 36.0 30 35.01918110327617 36.0 36.0 36.0 36.0 36.0 31 35.02147935347204 36.0 36.0 36.0 36.0 36.0 32 35.00351121557703 36.0 36.0 36.0 36.0 36.0 33 34.93846086880822 36.0 36.0 36.0 36.0 36.0 34 34.92432604973738 36.0 36.0 36.0 36.0 36.0 35 34.899167174487104 36.0 36.0 36.0 36.0 36.0 36 34.85646673050695 36.0 36.0 36.0 36.0 36.0 37 34.85127535474884 36.0 36.0 36.0 36.0 36.0 38 34.81841211804649 36.0 36.0 36.0 32.0 36.0 39 34.76312643277908 36.0 36.0 36.0 32.0 36.0 40 34.75094454600853 36.0 36.0 36.0 32.0 36.0 41 34.687289979977365 36.0 36.0 36.0 32.0 36.0 42 34.662255883462464 36.0 36.0 36.0 32.0 36.0 43 34.6029018310554 36.0 36.0 36.0 32.0 36.0 44 34.51665070659586 36.0 36.0 36.0 32.0 36.0 45 34.441557122544324 36.0 36.0 36.0 32.0 36.0 46 34.33317083079423 36.0 36.0 36.0 32.0 36.0 47 34.251545225037 36.0 36.0 36.0 32.0 36.0 48 34.18867125155973 36.0 36.0 36.0 32.0 36.0 49 34.113949101883286 36.0 36.0 36.0 32.0 36.0 50 33.70318621049883 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 2.0 21 16.0 22 42.0 23 115.0 24 257.0 25 433.0 26 1040.0 27 1918.0 28 3243.0 29 5005.0 30 7419.0 31 10371.0 32 15038.0 33 23490.0 34 48593.0 35 227626.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.17221920655332 20.81817838762021 13.596344815774883 22.413257590051582 2 14.755045067528744 21.618194164727186 40.46472080187119 23.162039965872882 3 17.662575084878558 27.66895911320043 29.7588578392966 24.909607962624417 4 10.385943530367662 17.7896752851049 38.742346420591396 33.08203476393604 5 11.323525144366094 40.99590841821189 33.156321638954175 14.524244798467834 6 29.356459059397753 39.000432374081925 18.715703884692505 12.927404681827811 7 27.916775485331247 34.99114941528104 19.31894025129857 17.773134848089146 8 27.946083978990742 32.83595949043846 18.67299265836743 20.544963872203358 9 27.724384086358494 15.188764110153507 20.907982937233392 36.178868866254604 10 15.80366211079191 28.775717477728445 31.09660195583413 24.324018455645515 11 33.4305446736891 24.87101360958765 22.495864890746063 19.20257682597719 12 24.667885435709934 28.49046748498302 27.967557528800675 18.87408955050637 13 27.277502103827516 23.031252720466615 26.676242709149474 23.015002466556396 14 22.837410405966168 22.729752473810976 28.20028437944343 26.23255274077943 15 24.42529235947883 28.655291488929514 25.763036476016367 21.156379675575288 16 23.00076028856143 29.316378704955802 25.701235614005558 21.981625392477206 17 20.276544499579234 28.354371608484954 26.816691332230636 24.552392559705176 18 20.138997707553465 28.07086271437277 29.782072487739764 22.008067090334002 19 22.704796726734568 26.767070021183365 30.66538986100229 19.86274339107977 20 24.79208380488088 25.94178926902876 29.327065378253682 19.939061547836683 21 26.35384927889498 24.750297437683177 28.12715823684745 20.76869504657439 22 24.056179449232467 26.969617828850005 28.18693595658861 20.787266765328923 23 22.986274339107975 26.634746525057313 28.901366762427095 21.47761237340762 24 21.79045573917964 27.299661931776964 29.13712801613442 21.772754312908983 25 22.029314382386993 27.03643839830068 29.8555754492773 21.078671770035026 26 20.72854004706811 27.274257342421947 30.517081777212884 21.480120833297057 27 21.345702943634507 28.45784195375615 29.033858761259168 21.16259634135017 28 20.984605562890845 27.36640501443682 29.654241813090348 21.994747609581985 29 21.415637477945957 27.614274770173648 29.688805831553534 21.281281920326865 30 22.277454701628535 26.91524184281088 29.887929333379766 20.919374122180823 31 21.568502273591232 26.99465190984565 29.626620314617437 21.81022550194568 32 20.662147495980918 27.811181465209543 29.5653586995003 21.96131233930924 33 21.127712857180168 27.468522296283616 29.585414194057613 21.818350652478607 34 21.221152088308777 27.56225171135983 30.42520653842471 20.791389661906685 35 22.443051565537857 27.47192478453904 28.820115492876003 21.264908157047095 36 21.157250224891907 27.541568729868548 29.350860392907922 21.95032065233162 37 22.245018180340857 27.084500134937883 28.117282786278704 22.553198898442556 38 21.26374742462494 27.774585763616845 29.268158207829142 21.69350860392908 39 21.2595797531681 28.726636429323836 28.166868345680733 21.846915471827327 40 22.05781641749466 27.822047079580276 29.586660785588265 20.5334757173368 41 21.91430213054909 27.869799132922818 29.19595131831715 21.019947418210943 42 21.274416202114356 28.449754350734334 28.286955487134247 21.988873960017063 43 20.836864037887846 28.432135021880693 28.673286979535455 22.057713960696006 44 21.586209898576588 28.009112146142574 28.571801680233317 21.832876275047518 45 22.046140452698783 28.056877539175858 28.72954149738828 21.167440510737087 46 22.69655226448986 27.83986210218715 27.24845691999199 22.21512871333099 47 22.193235733666082 28.4499644520538 27.12903179002046 22.22776802425966 48 21.84718606804048 28.75686687619164 27.422813844899284 21.9731332108686 49 21.85893045769539 28.307061022182502 27.548201372041465 22.28580714808065 50 21.541662555643903 28.60343236545348 27.591250195878143 22.263654883024476 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 100.0 1 57.5 2 15.0 3 62.5 4 110.0 5 116.0 6 122.0 7 121.5 8 121.0 9 166.5 10 212.0 11 382.5 12 553.0 13 1059.0 14 1565.0 15 2228.0 16 2891.0 17 3235.5 18 3580.0 19 3406.5 20 3233.0 21 3394.5 22 3556.0 23 3387.5 24 3219.0 25 3884.5 26 4550.0 27 5873.0 28 7196.0 29 8292.0 30 9388.0 31 9823.5 32 10259.0 33 11567.0 34 12875.0 35 14746.0 36 16617.0 37 19626.5 38 22636.0 39 22855.0 40 23074.0 41 24463.5 42 25853.0 43 24744.0 44 23635.0 45 24190.0 46 24745.0 47 24385.5 48 24026.0 49 23165.0 50 22304.0 51 21614.0 52 20924.0 53 19644.5 54 18365.0 55 16764.0 56 15163.0 57 14086.0 58 13009.0 59 11169.0 60 9329.0 61 7935.0 62 6541.0 63 5370.0 64 4199.0 65 3716.0 66 3233.0 67 2795.0 68 2357.0 69 2062.5 70 1768.0 71 1436.0 72 1104.0 73 941.0 74 778.0 75 674.5 76 571.0 77 454.0 78 337.0 79 291.0 80 245.0 81 182.0 82 119.0 83 100.0 84 81.0 85 54.5 86 28.0 87 18.5 88 9.0 89 6.0 90 3.0 91 2.0 92 1.0 93 1.5 94 2.0 95 1.5 96 1.0 97 2.0 98 3.0 99 4.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03279069092597429 2 0.0046429296886335274 3 0.0 4 0.0 5 0.0 6 2.9018310553959546E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0011607324221583819 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0014509155276979774 25 2.9018310553959546E-4 26 8.705493166187865E-4 27 5.803662110791909E-4 28 0.0014509155276979774 29 5.803662110791909E-4 30 0.001741098633237573 31 2.9018310553959546E-4 32 0.0011607324221583819 33 2.9018310553959546E-4 34 2.9018310553959546E-4 35 0.0 36 0.0 37 0.002031281738777168 38 0.0 39 8.705493166187865E-4 40 5.803662110791909E-4 41 0.0011607324221583819 42 0.003772380372014741 43 0.004062563477554336 44 0.004352746583093933 45 0.002901831055395955 46 0.002031281738777168 47 0.0014509155276979774 48 0.0060938452163315044 49 0.004062563477554336 50 0.0023214648443167637 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 344610.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.14921899335484 #Duplication Level Percentage of deduplicated Percentage of total 1 76.21278070043154 42.79288113641058 2 14.175893049240656 15.919306464963807 3 4.66080705127388 7.851020274232487 4 1.8891989828040399 4.24308189629949 5 0.9113860882717418 2.558680852893353 6 0.4981284578133828 1.6781714318751448 7 0.31767798771676226 1.248615963117374 8 0.19900032416746344 0.8938970225142009 9 0.1329732640036687 0.6719710428722864 >10 0.8190628818027247 9.007597438596536 >50 0.11047713387250675 4.401654323887777 >100 0.07053939064159984 7.88418591083029 >500 0.002074687960047054 0.8489362415067336 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 934 0.2710310205739822 No Hit CCATAGGGTCTTCTCGTCTTATTATTATATTTCAGCCTCTTCACTGAAAG 880 0.255361132874844 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 583 0.16917675052958417 No Hit GTCAGGATACCGCGGCCGTTAAACTTTAGTCACTGGGCAGGCAGTGCCTC 518 0.15031484866951045 No Hit GTATTAGAGGCACTGCCTGCCCAGTGACTAAAGTTTAACGGCCGCGGTAT 486 0.1410289892922434 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 446 0.12942166507065958 No Hit CTTCTACACCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTA 437 0.12681001712080323 No Hit GTTCATGCTAGTCCCTAATTAAGGAACAAGTGATTATGCTACCTTTGCAC 431 0.12506891848756566 No Hit CCATTGGGATGTCCTGATCCAACATCGAGGTCGTAAACCCTAATTGTCGA 423 0.12274745364324888 No Hit ATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTA 412 0.11955543948231333 No Hit GTATCAACGCAGAGTACATGGGAGAAATCGTAAATAGATAGAAACCGACC 408 0.11839470706015497 No Hit ACCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATC 405 0.11752415774353617 No Hit CCTATAACTTCTCTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATCC 401 0.11636342532137778 No Hit ATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGACT 386 0.11201067873828387 No Hit GTACATGGGAGAAATCGTAAATAGATAGAAACCGACCTGGATTGCTCCGG 379 0.10997939699950668 No Hit GACTATAGGCAATAATCACACTATAAATAATCCACCTATAACTTCTCTGT 373 0.10823829836626912 No Hit GTATCCTGACCGTGCAAAGGTAGCATAATCACTTGTTCCTTAATTAGGGA 369 0.10707756594411073 No Hit GCCTAAAGGAAAGATCCAAAAAGATAAAAGGAACTCGGCAAACAAGAACC 367 0.10649719973303154 No Hit CTGTTAACCCAACACCGGAATGCCTAAAGGAAAGATCCAAAAAGATAAAA 362 0.10504628420533357 No Hit CACTATAAATAATCCACCTATAACTTCTCTGTTAACCCAACACCGGAATG 359 0.10417573488871479 No Hit GATATATTTTGATCAACGGACCAAGTTACCCTAGGGATAACAGCGCAATC 352 0.1021444531499376 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 2.9018310553959546E-4 0.0 19 0.0 0.0 0.0 2.9018310553959546E-4 0.0 20 0.0 0.0 0.0 5.803662110791909E-4 0.0 21 0.0 0.0 0.0 5.803662110791909E-4 0.0 22 0.0 0.0 0.0 5.803662110791909E-4 0.0 23 0.0 0.0 0.0 0.0020312817387771686 0.0 24 0.0 0.0 0.0 0.003772380372014741 0.0 25 0.0 0.0 0.0 0.004352746583093932 0.0 26 0.0 0.0 0.0 0.005513479005252314 0.0 27 0.0 0.0 0.0 0.00580366211079191 0.0 28 0.0 0.0 0.0 0.007834943849569079 0.0 29 0.0 0.0 0.0 0.012477873538202606 0.0 30 0.0 0.0 0.0 0.018861901860073707 0.0 31 0.0 0.0 0.0 0.0325005078204347 0.0 32 0.0 0.0 0.0 0.05194277589158759 0.0 33 0.0 0.0 0.0 0.06703229737964655 0.0 34 0.0 0.0 0.0 0.08473346681756189 0.0 35 0.0 0.0 0.0 0.10533646731087316 0.0 36 0.0 0.0 0.0 0.13754679202576825 0.0 37 0.0 0.0 0.0 0.17556077885145527 0.0 38 0.0 0.0 0.0 0.2248919067931865 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGGAC 55 4.9516148E-6 27.997046 3 GTTTGTC 45 0.0013970471 24.441864 9 GCGTGAA 45 0.0013970471 24.441864 18 TAGGACG 90 1.5063051E-8 24.441864 4 GTATCAA 1920 0.0 23.719688 1 GGTATCA 925 0.0 23.30903 1 GTTACTC 70 3.205779E-5 22.00087 35 AAAGCGT 80 3.6064375E-6 21.997679 10 TGTAGGA 165 0.0 21.331081 2 ACGATTA 75 5.4564298E-5 20.534147 40 CGTATGC 75 5.4625314E-5 20.531166 9 GCGTATG 75 5.4625314E-5 20.531166 8 GTTATAT 110 1.2585406E-7 20.000792 1 ATAGCCC 110 1.2604687E-7 19.99789 3 GTATAGC 155 3.274181E-11 19.871756 1 TCCTCGC 90 9.982157E-6 19.55633 44 TTACTCA 90 9.982157E-6 19.55633 36 AGCGTTC 90 9.994677E-6 19.553492 12 GAAAGCG 90 9.994677E-6 19.553492 9 GACGTGG 80 8.972102E-5 19.247969 7 >>END_MODULE