##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062086_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 992971 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32686855910193 32.0 32.0 32.0 32.0 32.0 2 31.502052930045288 32.0 32.0 32.0 32.0 32.0 3 31.607627010255083 32.0 32.0 32.0 32.0 32.0 4 31.678911065882087 32.0 32.0 32.0 32.0 32.0 5 31.660210620451153 32.0 32.0 32.0 32.0 32.0 6 35.32227426581441 36.0 36.0 36.0 36.0 36.0 7 35.31848060013837 36.0 36.0 36.0 36.0 36.0 8 35.272596077831075 36.0 36.0 36.0 36.0 36.0 9 35.35503755900223 36.0 36.0 36.0 36.0 36.0 10 35.242774461691226 36.0 36.0 36.0 36.0 36.0 11 35.3549569927017 36.0 36.0 36.0 36.0 36.0 12 35.28125091266512 36.0 36.0 36.0 36.0 36.0 13 35.310317219737534 36.0 36.0 36.0 36.0 36.0 14 35.2793656612328 36.0 36.0 36.0 36.0 36.0 15 35.26265318926736 36.0 36.0 36.0 36.0 36.0 16 35.270431865583184 36.0 36.0 36.0 36.0 36.0 17 35.25259851496167 36.0 36.0 36.0 36.0 36.0 18 35.25551803627699 36.0 36.0 36.0 36.0 36.0 19 35.243688889202204 36.0 36.0 36.0 36.0 36.0 20 35.236558771605615 36.0 36.0 36.0 36.0 36.0 21 35.22690491464504 36.0 36.0 36.0 36.0 36.0 22 35.215420188505 36.0 36.0 36.0 36.0 36.0 23 35.18967422009303 36.0 36.0 36.0 36.0 36.0 24 35.17507661351641 36.0 36.0 36.0 36.0 36.0 25 35.16049914851491 36.0 36.0 36.0 36.0 36.0 26 35.124895893233536 36.0 36.0 36.0 36.0 36.0 27 35.111448370596925 36.0 36.0 36.0 36.0 36.0 28 35.094177977000335 36.0 36.0 36.0 36.0 36.0 29 35.0738772834252 36.0 36.0 36.0 36.0 36.0 30 35.05850624036351 36.0 36.0 36.0 36.0 36.0 31 35.0682990741925 36.0 36.0 36.0 36.0 36.0 32 35.03443504392374 36.0 36.0 36.0 36.0 36.0 33 35.010466569517135 36.0 36.0 36.0 36.0 36.0 34 34.99635135366491 36.0 36.0 36.0 36.0 36.0 35 34.985676318845165 36.0 36.0 36.0 36.0 36.0 36 34.972281164303894 36.0 36.0 36.0 36.0 36.0 37 34.955757016065924 36.0 36.0 36.0 36.0 36.0 38 34.942562270197215 36.0 36.0 36.0 36.0 36.0 39 34.92839871456467 36.0 36.0 36.0 36.0 36.0 40 34.92280036375685 36.0 36.0 36.0 36.0 36.0 41 34.89669788946505 36.0 36.0 36.0 36.0 36.0 42 34.86292046796936 36.0 36.0 36.0 32.0 36.0 43 34.85681354238945 36.0 36.0 36.0 32.0 36.0 44 34.80985950244267 36.0 36.0 36.0 32.0 36.0 45 34.805347789613194 36.0 36.0 36.0 32.0 36.0 46 34.78052027702722 36.0 36.0 36.0 32.0 36.0 47 34.74570153609723 36.0 36.0 36.0 32.0 36.0 48 34.72470192986502 36.0 36.0 36.0 32.0 36.0 49 34.716011847274494 36.0 36.0 36.0 32.0 36.0 50 34.31498301561677 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 12.0 21 24.0 22 59.0 23 154.0 24 374.0 25 931.0 26 2147.0 27 4039.0 28 6872.0 29 11073.0 30 16753.0 31 24835.0 32 38341.0 33 65733.0 34 153849.0 35 667770.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.65789258949951 18.205143961823747 12.452211685986828 25.684751762689906 2 16.398970305645193 19.486139814445533 37.034955625652124 27.07993425425716 3 18.90376911193334 22.69352626373914 28.316478107004674 30.08622651732285 4 13.082255171601185 15.64013450543873 34.55609479028088 36.7215155326792 5 15.03821867730143 36.21851616866572 32.78447485825352 15.958790295779329 6 35.71225716789027 34.19871698037201 16.053858626141775 14.03516722559594 7 31.399406427780875 29.881537325863494 19.529170539723715 19.189885706631916 8 28.558739379095666 33.03258604732665 18.56207280977994 19.846601763797732 9 26.886787227421543 14.807381081622726 18.67849111404059 39.62734057691514 10 17.21028832693838 26.517719568567028 30.168081613744626 26.10391049074997 11 37.26020195957385 21.43295222116255 21.394481812661194 19.91236400660241 12 24.756110702125238 23.54237938469502 27.965972822972674 23.735537090207064 13 29.591095812465824 19.300563661980057 24.948160621005044 26.160179904549075 14 23.75588008108998 19.445280879300604 24.805054729695026 31.993784309914385 15 25.539215143241844 26.82505329964319 21.834978060789286 25.800753496325672 16 26.071609486298165 25.935653580323255 23.164267968083596 24.828468965294988 17 24.31732648788333 26.14829637522143 24.72539480004955 24.808982336845688 18 25.120270380504568 25.17999015076976 25.520684894120777 24.179054574604898 19 25.84858973726322 25.012714369301825 25.063873970136086 24.074821923298867 20 25.988450785926638 24.386989308819622 24.82627838963592 24.798281515617823 21 26.798869251972114 24.106544904131137 24.63757753247577 24.457008311420978 22 26.162194062062234 24.031718952517245 24.980689264842578 24.825397720577943 23 24.721189965457164 24.384321782128364 25.388581729558794 25.505906522855675 24 24.964550577865865 24.67894102908061 25.197791662134783 25.158716730918744 25 25.178354186640455 24.294136366932268 25.28641406369591 25.241095382731366 26 24.831867354974893 25.208718123279144 25.377706789557745 24.581707732188214 27 25.374181996160992 24.613128747610695 25.042247166569652 24.970442089658658 28 24.944357946088136 24.59580202104025 25.415477454141882 25.04436257872973 29 24.809862190371454 24.809056521686585 25.491256480597485 24.88982480734448 30 24.842087665515894 24.96203255733386 25.411397886714017 24.784481890436233 31 25.382136419025752 24.565797556824474 24.838313342799882 25.213752681349888 32 25.3415538560388 24.5378977241828 24.71494377428341 25.405604645494996 33 24.837784135827274 24.49305968879127 25.17576112801332 25.49339504736814 34 25.531792757426768 24.427923727191978 25.264410924083702 24.775872591297553 35 25.664723002709046 24.358238416064935 25.30670614419368 24.67033243703234 36 24.789797063151013 24.916185701668432 24.991515344386382 25.302501890794172 37 25.735906517791772 24.611993043015875 24.98592590429212 24.666174534900232 38 25.03688425945974 24.454893446032163 25.17394767823028 25.334274616277817 39 25.66684324274242 24.53699134508672 24.71605157095639 25.08011384121447 40 25.69208969849069 24.691456245952804 24.922983652090544 24.693470403465962 41 24.68619204724441 25.02064526004971 25.401122296478018 24.89204039622786 42 25.787270727668986 24.939068851191028 24.861016553129947 24.41264386801004 43 25.439226377451185 24.270876660096942 25.067300206759928 25.22259675569194 44 25.02744413984527 24.77999367525878 24.89812936714317 25.29443281775278 45 25.210735686590464 24.799033183946825 24.944559141950755 25.04567198751196 46 25.02943258804347 24.69265731202169 24.919255509105724 25.358654590829115 47 25.173823018759993 24.729194613299175 25.28339395990187 24.81358840803896 48 25.771219035169256 25.047611086660737 24.378789877747018 24.802380000422986 49 25.159274157000105 25.251122422054863 24.43345129927025 25.15615212167478 50 25.1980692091633 25.157382817653463 24.61496473678221 25.029583236401027 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 245.0 1 143.0 2 41.0 3 125.0 4 209.0 5 209.5 6 210.0 7 155.0 8 100.0 9 153.0 10 206.0 11 357.5 12 509.0 13 963.0 14 1417.0 15 1783.5 16 2150.0 17 2122.5 18 2095.0 19 2049.5 20 2004.0 21 2252.0 22 2500.0 23 3039.5 24 3579.0 25 4471.5 26 5364.0 27 6680.0 28 7996.0 29 9582.0 30 11168.0 31 12809.0 32 14450.0 33 16478.5 34 18507.0 35 21395.0 36 24283.0 37 28616.5 38 32950.0 39 36946.5 40 40943.0 41 45023.0 42 49103.0 43 51710.0 44 54317.0 45 59849.5 46 65382.0 47 69535.0 48 73688.0 49 76314.0 50 78940.0 51 77282.5 52 75625.0 53 75119.5 54 74614.0 55 74784.5 56 74955.0 57 72242.0 58 69529.0 59 64527.0 60 59525.0 61 52468.5 62 45412.0 63 38562.5 64 31713.0 65 26942.0 66 22171.0 67 19148.5 68 16126.0 69 14053.0 70 11980.0 71 9327.0 72 6674.0 73 5792.0 74 4910.0 75 3726.0 76 2542.0 77 2219.0 78 1896.0 79 1576.5 80 1257.0 81 976.0 82 695.0 83 612.5 84 530.0 85 404.5 86 279.0 87 190.0 88 101.0 89 64.0 90 27.0 91 21.0 92 15.0 93 13.0 94 11.0 95 14.5 96 18.0 97 13.0 98 8.0 99 5.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03142085720529603 2 0.005538933161190004 3 5.035393782900005E-4 4 0.0 5 1.0070787565800009E-4 6 1.0070787565800009E-4 7 0.0 8 0.0 9 0.0 10 1.0070787565800009E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 2.0141575131600017E-4 17 0.0 18 0.0 19 0.0 20 3.0212362697400023E-4 21 0.0 22 0.0 23 1.0070787565800009E-4 24 7.049551296060006E-4 25 3.0212362697400023E-4 26 5.035393782900005E-4 27 5.035393782900005E-4 28 0.0017120338861860015 29 7.049551296060006E-4 30 0.0015106181348700013 31 1.0070787565800009E-4 32 9.063708809220007E-4 33 4.0283150263200034E-4 34 9.063708809220007E-4 35 1.0070787565800009E-4 36 2.0141575131600017E-4 37 0.001208494507896001 38 0.0 39 9.063708809220007E-4 40 0.0 41 7.049551296060006E-4 42 0.004733270155926004 43 0.0032226520210560028 44 0.004531854404610004 45 0.0021148653888180017 46 0.002416989015792002 47 7.049551296060006E-4 48 0.0030212362697400025 49 0.002920528394082002 50 0.001007078756580001 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 992971.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.56466883878145 #Duplication Level Percentage of deduplicated Percentage of total 1 77.08045196731811 45.91271595376904 2 14.026895252012952 16.71014741044855 3 4.2090305844585805 7.521285386867343 4 1.713556259366018 4.082696445030319 5 0.8570872503632276 2.5526059116913715 6 0.49730251315194063 1.7772995705153463 7 0.3127825345302082 1.3041551661492603 8 0.2312319230310464 1.1018602336239105 9 0.16776926524226562 0.8993808652933116 >10 0.7885887489751553 8.312034425461803 >50 0.06361217553820359 2.6177445930978513 >100 0.04778065437342321 5.601632139793847 >500 0.0037408337414679147 1.5047542577656188 >1k 1.7003789733945068E-4 0.10168764049247367 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1004 0.1011107071606321 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0141575131600017E-4 2 0.0 0.0 0.0 0.0 2.0141575131600017E-4 3 0.0 0.0 0.0 0.0 2.0141575131600017E-4 4 0.0 0.0 0.0 0.0 2.0141575131600017E-4 5 0.0 0.0 0.0 0.0 3.0212362697400023E-4 6 0.0 0.0 0.0 0.0 3.0212362697400023E-4 7 0.0 0.0 0.0 0.0 3.0212362697400023E-4 8 0.0 0.0 0.0 0.0 3.0212362697400023E-4 9 0.0 0.0 0.0 0.0 4.0283150263200034E-4 10 0.0 0.0 0.0 0.0 4.0283150263200034E-4 11 0.0 0.0 0.0 0.0 4.0283150263200034E-4 12 0.0 0.0 0.0 0.0 9.063708809220007E-4 13 0.0 0.0 0.0 0.0 9.063708809220007E-4 14 0.0 0.0 0.0 0.0 9.063708809220007E-4 15 0.0 0.0 0.0 0.0 9.063708809220007E-4 16 0.0 0.0 0.0 0.0 0.001007078756580001 17 0.0 0.0 0.0 0.0 0.001007078756580001 18 0.0 0.0 0.0 0.0 0.001007078756580001 19 0.0 0.0 0.0 1.0070787565800009E-4 0.001007078756580001 20 0.0 0.0 0.0 2.0141575131600017E-4 0.0011077866322380008 21 0.0 0.0 0.0 2.0141575131600017E-4 0.001208494507896001 22 0.0 0.0 0.0 2.0141575131600017E-4 0.001208494507896001 23 0.0 0.0 0.0 3.0212362697400023E-4 0.001309202383554001 24 0.0 0.0 0.0 5.035393782900005E-4 0.001309202383554001 25 0.0 0.0 0.0 8.056630052640007E-4 0.001309202383554001 26 0.0 0.0 0.0 0.0015106181348700013 0.001309202383554001 27 0.0 0.0 0.0 0.0016113260105280014 0.001309202383554001 28 0.0 0.0 0.0 0.0028198205184240023 0.001309202383554001 29 0.0 0.0 0.0 0.0053375174098740045 0.001309202383554001 30 0.0 0.0 0.0 0.009265124560536008 0.001309202383554001 31 0.0 0.0 0.0 0.016213967980938014 0.001309202383554001 32 0.0 0.0 0.0 0.02316281140134002 0.001309202383554001 33 0.0 0.0 0.0 0.028802452438188023 0.0014099102592120012 34 0.0 0.0 0.0 0.03645625098819603 0.0017120338861860015 35 0.0 0.0 0.0 0.04320367865728204 0.0017120338861860015 36 0.0 0.0 0.0 0.05438225285532004 0.0017120338861860015 37 0.0 0.0 0.0 0.07099905233889006 0.0017120338861860015 38 0.0 0.0 0.0 0.09355761648628208 0.0019134496375020015 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1340 0.0 24.964937 1 ACGCTTA 45 0.0013981499 24.444109 17 GGTATCA 620 0.0 22.008564 1 ACGTAGT 50 0.0025803216 21.999699 13 GTACGTA 60 2.8725437E-4 21.999699 11 CTAAGCG 55 0.004483414 19.999725 3 TTAACGG 55 0.004483414 19.999725 35 TCGACGC 55 0.004483414 19.999725 14 ATAGCAC 105 1.7922648E-6 18.856884 3 CTACACG 95 1.596831E-5 18.526062 4 GCGCAAT 215 0.0 18.418352 35 CGCAATA 215 0.0 18.418352 36 CAATACG 215 0.0 18.418352 38 GCTATAC 60 0.00741178 18.333082 3 TCGGGTA 60 0.00741178 18.333082 16 TAAGCGT 60 0.00741178 18.333082 4 CGCTTAC 60 0.00741178 18.333082 18 TACGAAT 235 0.0 17.78699 41 CGAGCCG 250 0.0 17.599758 15 GCGGGTC 215 0.0 17.395111 33 >>END_MODULE