##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062084_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 741587 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.294734130992047 32.0 32.0 32.0 32.0 32.0 2 31.49047245973837 32.0 32.0 32.0 32.0 32.0 3 31.596969741918347 32.0 32.0 32.0 32.0 32.0 4 31.669004445870815 32.0 32.0 32.0 32.0 32.0 5 31.652960475304987 32.0 32.0 32.0 32.0 32.0 6 35.29698740673717 36.0 36.0 36.0 36.0 36.0 7 35.299896033776214 36.0 36.0 36.0 36.0 36.0 8 35.26133279035366 36.0 36.0 36.0 36.0 36.0 9 35.33139469812713 36.0 36.0 36.0 36.0 36.0 10 35.22535319524209 36.0 36.0 36.0 36.0 36.0 11 35.32746259036364 36.0 36.0 36.0 36.0 36.0 12 35.262294241943295 36.0 36.0 36.0 36.0 36.0 13 35.29055795206766 36.0 36.0 36.0 36.0 36.0 14 35.25716470218599 36.0 36.0 36.0 36.0 36.0 15 35.237674069259576 36.0 36.0 36.0 36.0 36.0 16 35.24853051631164 36.0 36.0 36.0 36.0 36.0 17 35.23832537517513 36.0 36.0 36.0 36.0 36.0 18 35.22688099980178 36.0 36.0 36.0 36.0 36.0 19 35.21973281624408 36.0 36.0 36.0 36.0 36.0 20 35.20937529918944 36.0 36.0 36.0 36.0 36.0 21 35.20417968491896 36.0 36.0 36.0 36.0 36.0 22 35.17947455928974 36.0 36.0 36.0 36.0 36.0 23 35.1628291758081 36.0 36.0 36.0 36.0 36.0 24 35.144024908743006 36.0 36.0 36.0 36.0 36.0 25 35.125942067485 36.0 36.0 36.0 36.0 36.0 26 35.097219881146785 36.0 36.0 36.0 36.0 36.0 27 35.07174073979183 36.0 36.0 36.0 36.0 36.0 28 35.046680969326594 36.0 36.0 36.0 36.0 36.0 29 35.033854423014425 36.0 36.0 36.0 36.0 36.0 30 35.0030205491736 36.0 36.0 36.0 36.0 36.0 31 35.003073139092244 36.0 36.0 36.0 36.0 36.0 32 34.977728843682534 36.0 36.0 36.0 36.0 36.0 33 34.967097589359035 36.0 36.0 36.0 36.0 36.0 34 34.940319881551325 36.0 36.0 36.0 36.0 36.0 35 34.93188796459485 36.0 36.0 36.0 36.0 36.0 36 34.9103260979494 36.0 36.0 36.0 36.0 36.0 37 34.882503334065994 36.0 36.0 36.0 36.0 36.0 38 34.87364800084144 36.0 36.0 36.0 32.0 36.0 39 34.824689483499576 36.0 36.0 36.0 32.0 36.0 40 34.832688544971795 36.0 36.0 36.0 32.0 36.0 41 34.80437089646933 36.0 36.0 36.0 32.0 36.0 42 34.78320277998401 36.0 36.0 36.0 32.0 36.0 43 34.76741636517361 36.0 36.0 36.0 32.0 36.0 44 34.723240833509756 36.0 36.0 36.0 32.0 36.0 45 34.69122705764799 36.0 36.0 36.0 32.0 36.0 46 34.63691111090135 36.0 36.0 36.0 32.0 36.0 47 34.61341690186047 36.0 36.0 36.0 32.0 36.0 48 34.60119716230193 36.0 36.0 36.0 32.0 36.0 49 34.56044941456633 36.0 36.0 36.0 32.0 36.0 50 34.18573950190605 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 9.0 21 24.0 22 53.0 23 147.0 24 348.0 25 872.0 26 1862.0 27 3350.0 28 5874.0 29 9391.0 30 13796.0 31 20139.0 32 30120.0 33 50203.0 34 113792.0 35 491605.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.914747243112 17.722726199709978 12.078777863959802 26.28374869321822 2 15.852520517723592 19.990317630273722 37.959069737335376 26.198092114667304 3 18.890349723902183 23.723376281882725 28.410633979921386 28.975640014293706 4 12.692104904751567 16.021451292970347 35.47904696279735 35.80739683948074 5 14.384151825746674 36.690502934921994 33.437883889550385 15.487461349780943 6 34.09323518346465 35.058462459563074 16.89821962898487 13.950082727987411 7 30.421245248366002 30.08574853658438 20.4019218244117 19.091084390637917 8 27.58975009000967 33.75288401765403 19.196938457659048 19.460427434677253 9 27.295785929364996 14.672047918855105 18.710279441252343 39.32188671052756 10 16.326203129235004 26.955839301390128 31.419240089160137 25.298717480214727 11 36.14855708096286 21.461541262185015 22.93540744376587 19.45449421308626 12 24.95448943210902 23.369373208232087 29.090220149787076 22.585917209871813 13 29.497820215295036 20.22406002262715 25.21700083739332 25.061118924684493 14 23.252025723212515 19.74009792512544 25.576634973374667 31.43124137828738 15 24.640804113340714 27.93333755850628 22.38253906824149 25.043319259911513 16 24.958635783182732 26.161602949366426 24.468063588296925 24.411697679153917 17 23.520638846150216 26.327996580306827 25.709727921336267 24.441636652206686 18 23.841771341113965 25.55715123687777 26.940809212699822 23.66026820930844 19 25.291705491061737 24.995448949347818 25.864665912428347 23.848179647162098 20 25.53331787093573 24.77183973764267 25.867872014498694 23.826970376922908 21 25.501660627815752 24.35762762831603 25.478871663068524 24.661840080799692 22 25.470780906353536 24.926677517270395 25.44165418217957 24.1608873941965 23 24.137559045668276 25.08242458403397 25.94301140661851 24.83700496367924 24 24.601086603279228 24.877524518694617 26.077669614888272 24.44371926313788 25 24.66986252418806 24.848533883506274 26.151284073976683 24.330319518328984 26 24.143589937215474 25.330373902349567 26.30895488575805 24.217081274676907 27 24.292865002481175 25.42665429674858 25.889177760037974 24.39130294073227 28 24.202942132311 25.248964697918336 25.674547683229253 24.87354548654141 29 24.340294586835423 25.2414773301905 25.670830293656387 24.747397789317688 30 24.42477470370655 25.15794001717956 25.957854793622797 24.459430485491094 31 24.95462403348517 24.70030286603504 25.632499170691847 24.71257392978794 32 24.543946708379405 25.345748267213246 25.686776881792927 24.42352814261442 33 24.16688579191866 25.236486714267414 26.098019781953518 24.498607711860405 34 24.60897836115445 25.099820249385434 26.09849470659387 24.19270668286625 35 24.63669033219388 25.275052758618365 25.982861034136345 24.10539587505141 36 24.35509839721893 25.333811587597392 25.924977008735333 24.386113006448344 37 24.68631038988534 25.00266324333144 25.48083341311826 24.83019295366496 38 24.470628530435405 25.545620405967203 25.57461228419592 24.409138779401474 39 25.024609550933008 25.111316078329843 25.324643802034032 24.539430568703125 40 25.121968321947826 25.101067172249746 25.73201220087758 24.04495230492485 41 24.84583612579071 24.989987607557367 25.928522979957684 24.23565328669424 42 24.732727047159784 25.434756811279946 25.678565841923284 24.153950299636982 43 24.441148112437887 25.202106356152193 25.887144080424505 24.469601450985415 44 24.244827065397974 25.526867974194662 25.605621723088873 24.622683237318487 45 24.327852228625986 25.567775743077597 25.511409453894263 24.59296257440215 46 24.611200185550523 25.044466050052794 25.446851776686707 24.897481987709973 47 24.89373924581834 25.365035357322014 25.510671923966928 24.23055347289272 48 24.554384147969547 25.669603726208873 25.124669951642353 24.651342174179227 49 24.85985719390748 25.289758820872077 25.15221187623472 24.698172108985723 50 24.437483312611754 25.976633611029452 25.148264916165257 24.437618160193534 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 166.0 1 106.5 2 47.0 3 131.5 4 216.0 5 227.0 6 238.0 7 187.5 8 137.0 9 202.5 10 268.0 11 434.5 12 601.0 13 1011.5 14 1422.0 15 1838.0 16 2254.0 17 2172.0 18 2090.0 19 2018.5 20 1947.0 21 2119.5 22 2292.0 23 2702.5 24 3113.0 25 3842.5 26 4572.0 27 5813.5 28 7055.0 29 8634.5 30 10214.0 31 12098.0 32 13982.0 33 16728.0 34 19474.0 35 22353.0 36 25232.0 37 27535.0 38 29838.0 39 31694.0 40 33550.0 41 35688.5 42 37827.0 43 39697.5 44 41568.0 45 44495.0 46 47422.0 47 49698.5 48 51975.0 49 53519.5 50 55064.0 51 56316.5 52 57569.0 53 57073.5 54 56578.0 55 54447.0 56 52316.0 57 49856.5 58 47397.0 59 43798.5 60 40200.0 61 35310.5 62 30421.0 63 26270.5 64 22120.0 65 18497.0 66 14874.0 67 12344.0 68 9814.0 69 8219.0 70 6624.0 71 5295.5 72 3967.0 73 3414.0 74 2861.0 75 2240.0 76 1619.0 77 1352.0 78 1085.0 79 908.5 80 732.0 81 575.5 82 419.0 83 326.0 84 233.0 85 175.0 86 117.0 87 78.5 88 40.0 89 25.5 90 11.0 91 8.0 92 5.0 93 6.0 94 7.0 95 7.0 96 7.0 97 4.5 98 2.0 99 3.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.035329637655460516 2 0.0044499161932450276 3 2.6969189049969863E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 1.3484594524984931E-4 13 0.0 14 0.0 15 0.0 16 5.393837809993973E-4 17 0.0 18 2.6969189049969863E-4 19 0.0 20 4.045378357495479E-4 21 0.0 22 0.0 23 0.0 24 0.001348459452498493 25 2.6969189049969863E-4 26 4.045378357495479E-4 27 4.045378357495479E-4 28 0.002157535123997589 29 8.090756714990958E-4 30 0.0010787675619987945 31 6.742297262492465E-4 32 9.439216167489452E-4 33 2.6969189049969863E-4 34 5.393837809993973E-4 35 2.6969189049969863E-4 36 1.3484594524984931E-4 37 0.001348459452498493 38 0.0 39 6.742297262492465E-4 40 1.3484594524984931E-4 41 8.090756714990958E-4 42 0.0031014567407465343 43 0.0029666107954966848 44 0.004719608083744726 45 0.0012136135072486438 46 0.001348459452498493 47 0.0020226891787477395 48 0.0039105324122456295 49 0.0029666107954966848 50 0.0012136135072486438 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 741587.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.49988503454601 #Duplication Level Percentage of deduplicated Percentage of total 1 79.96747987698473 53.97795698198842 2 12.628462475776606 17.048395305559982 3 3.445692179482284 6.977514779384654 4 1.3634756294772459 3.681377929484775 5 0.7304260048855371 2.4651835678008247 6 0.42057058108377554 1.7033079523240235 7 0.31322837654731195 1.4800015584550732 8 0.21111301326502502 1.1400083299748622 9 0.14753396382132383 0.8962673036967208 >10 0.7354992023255412 8.327263541525403 >50 0.027890911015045858 1.291151757286837 >100 0.008427139166052379 0.9001072190265776 >500 2.006461695449702E-4 0.11146377349194887 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 823 0.11097821294062599 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3484594524984931E-4 2 0.0 0.0 0.0 0.0 1.3484594524984931E-4 3 0.0 0.0 0.0 0.0 1.3484594524984931E-4 4 0.0 0.0 0.0 0.0 1.3484594524984931E-4 5 0.0 0.0 0.0 0.0 1.3484594524984931E-4 6 0.0 0.0 0.0 0.0 2.6969189049969863E-4 7 0.0 0.0 0.0 0.0 2.6969189049969863E-4 8 0.0 0.0 0.0 0.0 2.6969189049969863E-4 9 0.0 0.0 0.0 0.0 2.6969189049969863E-4 10 0.0 0.0 0.0 0.0 4.045378357495479E-4 11 0.0 0.0 0.0 1.3484594524984931E-4 4.045378357495479E-4 12 0.0 0.0 0.0 2.6969189049969863E-4 6.742297262492465E-4 13 0.0 0.0 0.0 2.6969189049969863E-4 0.0012136135072486438 14 0.0 0.0 0.0 2.6969189049969863E-4 0.0012136135072486438 15 0.0 0.0 0.0 2.6969189049969863E-4 0.0014833053977483424 16 0.0 0.0 0.0 4.045378357495479E-4 0.0014833053977483424 17 0.0 0.0 0.0 4.045378357495479E-4 0.0014833053977483424 18 0.0 0.0 0.0 4.045378357495479E-4 0.0014833053977483424 19 0.0 0.0 0.0 4.045378357495479E-4 0.0014833053977483424 20 0.0 0.0 0.0 5.393837809993973E-4 0.0018878432334978902 21 0.0 0.0 0.0 5.393837809993973E-4 0.0020226891787477395 22 0.0 0.0 0.0 6.742297262492465E-4 0.0020226891787477395 23 0.0 0.0 0.0 0.0012136135072486438 0.0020226891787477395 24 0.0 0.0 0.0 0.002157535123997589 0.0020226891787477395 25 0.0 0.0 0.0 0.0029666107954966848 0.0020226891787477395 26 0.0 0.0 0.0 0.003505994576496082 0.0020226891787477395 27 0.0 0.0 0.0 0.004584762138494876 0.0020226891787477395 28 0.0 0.0 0.0 0.005258991864744123 0.0020226891787477395 29 0.0 0.0 0.0 0.007551372933991561 0.0020226891787477395 30 0.0 0.0 0.0 0.010248291838988547 0.0020226891787477395 31 0.0 0.0 0.0 0.01564212964898252 0.0020226891787477395 32 0.0 0.0 0.0 0.02305865663772423 0.0020226891787477395 33 0.0 0.0 0.0 0.030340337681216096 0.0020226891787477395 34 0.0 0.0 0.0 0.0388356322319566 0.0020226891787477395 35 0.0 0.0 0.0 0.050297537578193795 0.0020226891787477395 36 0.0 0.0 0.0 0.061624596979181136 0.0020226891787477395 37 0.0 0.0 0.0 0.0806378752594099 0.0020226891787477395 38 0.0 0.0 0.0 0.10558437513063201 0.0020226891787477395 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCAATA 40 7.0277246E-4 27.501223 36 GATTTCG 195 0.0 24.824965 41 CTAGCGG 45 0.0013978916 24.443884 29 GTATCAA 1130 0.0 24.343931 1 GTCCTAC 380 0.0 22.586042 1 GTAGGAC 440 0.0 21.998013 3 TAAACTA 75 5.4727883E-5 20.531477 4 ATTTCGT 205 0.0 20.3939 42 CTGTAGG 440 0.0 20.006285 1 TGTAGGA 500 0.0 19.799545 2 AATCGAG 80 8.979536E-5 19.250856 22 TAGGACC 300 0.0 19.064943 4 AGTGCGG 70 8.124218E-4 18.855436 10 TCCTACA 520 0.0 18.614958 2 TAGGACA 250 0.0 18.478329 4 TAAGGCG 60 0.0074133324 18.331676 5 GATAGTA 60 0.0074133324 18.331676 7 TAGGACG 435 0.0 17.699549 4 GGTATCA 515 0.0 17.520067 1 AACGCAG 1620 0.0 17.381144 6 >>END_MODULE