##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062081_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1978070 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.289142952473878 32.0 32.0 32.0 32.0 32.0 2 31.46483643147108 32.0 32.0 32.0 32.0 32.0 3 31.580582082534995 32.0 32.0 32.0 32.0 32.0 4 31.658897308993108 32.0 32.0 32.0 32.0 32.0 5 31.637688251679666 32.0 32.0 32.0 32.0 32.0 6 35.28806311202334 36.0 36.0 36.0 36.0 36.0 7 35.29644603072692 36.0 36.0 36.0 36.0 36.0 8 35.248372403403316 36.0 36.0 36.0 36.0 36.0 9 35.334504340089076 36.0 36.0 36.0 36.0 36.0 10 35.21633410344427 36.0 36.0 36.0 36.0 36.0 11 35.32736910220569 36.0 36.0 36.0 36.0 36.0 12 35.26333092357702 36.0 36.0 36.0 36.0 36.0 13 35.28649238904589 36.0 36.0 36.0 36.0 36.0 14 35.25174538818141 36.0 36.0 36.0 36.0 36.0 15 35.23687230482238 36.0 36.0 36.0 36.0 36.0 16 35.25218976072637 36.0 36.0 36.0 36.0 36.0 17 35.23152112918147 36.0 36.0 36.0 36.0 36.0 18 35.22287077808166 36.0 36.0 36.0 36.0 36.0 19 35.222880383404025 36.0 36.0 36.0 36.0 36.0 20 35.21762475544344 36.0 36.0 36.0 36.0 36.0 21 35.21379779279803 36.0 36.0 36.0 36.0 36.0 22 35.194071493930956 36.0 36.0 36.0 36.0 36.0 23 35.16453816093465 36.0 36.0 36.0 36.0 36.0 24 35.154860040342356 36.0 36.0 36.0 36.0 36.0 25 35.14362080209497 36.0 36.0 36.0 36.0 36.0 26 35.099321560915435 36.0 36.0 36.0 36.0 36.0 27 35.0872031829005 36.0 36.0 36.0 36.0 36.0 28 35.07444225937404 36.0 36.0 36.0 36.0 36.0 29 35.05812534440136 36.0 36.0 36.0 36.0 36.0 30 35.04029382175555 36.0 36.0 36.0 36.0 36.0 31 35.03412568817079 36.0 36.0 36.0 36.0 36.0 32 35.00911191211635 36.0 36.0 36.0 36.0 36.0 33 34.992531103550434 36.0 36.0 36.0 36.0 36.0 34 34.982714969642124 36.0 36.0 36.0 36.0 36.0 35 34.97642702229951 36.0 36.0 36.0 36.0 36.0 36 34.948413857952445 36.0 36.0 36.0 36.0 36.0 37 34.940828686548 36.0 36.0 36.0 36.0 36.0 38 34.93406552852022 36.0 36.0 36.0 36.0 36.0 39 34.91092226260951 36.0 36.0 36.0 36.0 36.0 40 34.90724089642935 36.0 36.0 36.0 36.0 36.0 41 34.88330443310904 36.0 36.0 36.0 36.0 36.0 42 34.86000647095401 36.0 36.0 36.0 32.0 36.0 43 34.84979854100209 36.0 36.0 36.0 32.0 36.0 44 34.82428832144464 36.0 36.0 36.0 32.0 36.0 45 34.806465898577905 36.0 36.0 36.0 32.0 36.0 46 34.78866268635589 36.0 36.0 36.0 32.0 36.0 47 34.759450878886994 36.0 36.0 36.0 32.0 36.0 48 34.74132411896444 36.0 36.0 36.0 32.0 36.0 49 34.72862133291542 36.0 36.0 36.0 32.0 36.0 50 34.32230456960573 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 4.0 19 3.0 20 14.0 21 52.0 22 102.0 23 291.0 24 849.0 25 2053.0 26 4433.0 27 8209.0 28 14493.0 29 23188.0 30 34401.0 31 51019.0 32 78558.0 33 132230.0 34 302976.0 35 1325195.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.301700387168815 17.118919892062028 11.848599597862277 26.730780122906882 2 16.45371490567955 18.964697008227034 37.102595512315276 27.478992573778143 3 19.413325352465847 21.714262025900073 28.03756602415291 30.834846597481175 4 13.517873482738224 15.303300692088753 33.78363758613194 37.39518823904108 5 15.297689161657576 35.65814152178638 33.06455282168983 15.979616494866208 6 36.35580041899554 33.49800613124752 15.794534453890268 14.351658995866664 7 31.903623228702727 29.372216352303006 19.083146703605028 19.641013715389242 8 28.36441581946038 33.920639815577815 18.0397053693752 19.675238995586607 9 26.88782500113747 14.997447006425455 18.03121224223612 40.08351575020095 10 16.799725793046548 26.818491578651493 30.883973655101848 25.497808973200115 11 37.310914173917 21.23660942231569 21.2452542124394 20.20722219132791 12 24.57745407263346 22.961736926264958 28.330103752700236 24.130705248401345 13 30.33588295661933 19.207358688014075 24.43998442926691 26.016773926099685 14 23.546790558473663 18.62355730585874 24.801144549990646 33.02850758567695 15 25.50051312643132 26.508819202556026 21.66945558043952 26.32121209057313 16 25.946599058165727 25.852415630505725 22.973375361150218 25.22760995017833 17 24.777839004686385 25.780482996051706 24.65059376058481 24.791084238677094 18 25.105633482401498 25.468108748646408 24.970905925282576 24.455351843669522 19 26.016736524357846 24.936996636618844 24.757326463333683 24.288940375689624 20 25.89921074503 24.63484571814518 24.83246278692138 24.63348074990344 21 25.955855960608066 24.3050549272776 24.6694505250067 25.069638587107633 22 26.021273261310267 24.145758239091638 24.696497090598413 25.136471408999682 23 25.418716223389463 24.3980243368536 24.85083945461991 25.33241998513703 24 25.26097658756018 24.414587894852055 24.87509169379354 25.44934382379423 25 25.498492969381143 24.218047765944647 24.84184014454552 25.44161912012869 26 25.269038720241692 24.687155755055077 24.893216134386147 25.150589390317084 27 25.422320994794383 24.77734463668135 24.68796399699301 25.112370371531256 28 25.49046174130475 24.541135288877744 24.69492435418198 25.273478615635526 29 25.354286523159054 24.788479621447276 24.84211803484222 25.015115820551447 30 25.519958100022045 24.683930185577267 24.637621812254935 25.15848990214576 31 25.50940191248474 24.446337437533337 24.643601922090134 25.400658727891795 32 25.381928593419893 24.71490905450966 24.664000408482483 25.239161943587963 33 25.287275550967458 24.64230212743154 24.754280190853088 25.316142130747917 34 25.56888010584145 24.380539854088845 24.899535047847554 25.15104499222215 35 25.45894552611211 24.604323311596623 24.83242478642028 25.104306375870987 36 25.33760282781548 24.671850860235057 24.861581829506022 25.12896448244344 37 25.660047319568868 24.492578512062448 24.654000930213744 25.193373238154944 38 25.427209350528546 24.676780902596978 24.804683352965267 25.091326393909213 39 25.4913925417532 24.638381599674833 24.705113920159835 25.16511193841213 40 25.676619812867905 24.46816792951506 24.570489993266158 25.284722264350872 41 25.273084741581226 24.767991086166216 24.775220431849768 25.18370374040279 42 25.3490828218238 24.68107437477534 24.798669746593603 25.171173056807262 43 25.49911880063863 24.36867601691822 24.7046743505768 25.427530831866353 44 25.276479744872702 24.740431336207962 24.862272010062725 25.120816908856604 45 25.4182199829527 24.578140024448615 24.685570361562487 25.318069631036195 46 25.36575624676129 24.49357313481882 24.784166024190796 25.35650459422909 47 25.212924452326508 24.85989983059065 24.706162486369145 25.221013230713694 48 25.33889046455534 24.932520188331743 24.531559419393034 25.197029927719882 49 25.510213367468893 24.66637950733975 24.54484235559627 25.278564769595086 50 25.179773917615417 24.979373521263472 24.63681219793331 25.2040403631878 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 27.0 2 45.0 3 105.0 4 165.0 5 222.5 6 280.0 7 228.5 8 177.0 9 235.0 10 293.0 11 473.5 12 654.0 13 1260.5 14 1867.0 15 2365.5 16 2864.0 17 2895.0 18 2926.0 19 2855.5 20 2785.0 21 3226.5 22 3668.0 23 4576.0 24 5484.0 25 7058.0 26 8632.0 27 11055.0 28 13478.0 29 15835.0 30 18192.0 31 22151.5 32 26111.0 33 31425.5 34 36740.0 35 42993.5 36 49247.0 37 56302.5 38 63358.0 39 71102.0 40 78846.0 41 87077.0 42 95308.0 43 103880.5 44 112453.0 45 121044.5 46 129636.0 47 136614.5 48 143593.0 49 148787.0 50 153981.0 51 157043.0 52 160105.0 53 159318.5 54 158532.0 55 155791.0 56 153050.0 57 145697.5 58 138345.0 59 127682.5 60 117020.0 61 103852.0 62 90684.0 63 78713.0 64 66742.0 65 56357.0 66 45972.0 67 38901.0 68 31830.0 69 27121.5 70 22413.0 71 18523.0 72 14633.0 73 12334.0 74 10035.0 75 8513.0 76 6991.0 77 5824.0 78 4657.0 79 3811.5 80 2966.0 81 2316.0 82 1666.0 83 1249.0 84 832.0 85 641.5 86 451.0 87 315.0 88 179.0 89 121.0 90 63.0 91 46.0 92 29.0 93 27.5 94 26.0 95 28.5 96 31.0 97 26.0 98 21.0 99 13.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03225366139722052 2 0.003993791928495958 3 3.0332596925285757E-4 4 0.0 5 0.0 6 3.0332596925285757E-4 7 0.0 8 0.0 9 0.0 10 1.0110865641761919E-4 11 0.0 12 5.0554328208809595E-5 13 0.0 14 0.0 15 0.0 16 7.583149231321439E-4 17 0.0 18 2.0221731283523838E-4 19 5.0554328208809595E-5 20 1.0110865641761919E-4 21 0.0 22 0.0 23 0.0 24 9.605322359673823E-4 25 4.0443462567047676E-4 26 4.5498895387928635E-4 27 6.572062667145248E-4 28 0.0018199558155171454 29 5.055432820880959E-4 30 0.0013144125334290497 31 7.583149231321439E-4 32 8.594235795497632E-4 33 2.0221731283523838E-4 34 8.594235795497632E-4 35 1.5166298462642878E-4 36 3.0332596925285757E-4 37 0.0015166298462642878 38 0.0 39 9.099779077585727E-4 40 1.0110865641761919E-4 41 0.0010616408923850016 42 0.005105987149089769 43 0.004246563569540006 44 0.0038926832720783387 45 0.002224390441187622 46 0.002274944769396432 47 0.0010616408923850016 48 0.0035893573028254813 49 0.00374102028745191 50 0.0015166298462642878 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1978070.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.65850668759536 #Duplication Level Percentage of deduplicated Percentage of total 1 65.84189640694304 34.01294045862028 2 17.162347036544404 17.731624383243233 3 7.106018372201264 11.012588928076038 4 3.5146517943934983 7.2624665290098225 5 1.9515485951660558 5.040704307727652 6 1.1941769944684528 3.701364015295266 7 0.778316675915998 2.8144674045511504 8 0.5169420440882546 2.1363563233305856 9 0.3860026953370754 1.7946290536650127 >10 1.499918172691074 12.407550162234775 >50 0.03872467654040429 1.3181697106478154 >100 0.009161268754870075 0.6568083285633418 >500 2.952669556844045E-4 0.11033039503507248 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 5.0554328208809595E-5 5 0.0 0.0 0.0 0.0 5.0554328208809595E-5 6 0.0 0.0 0.0 0.0 5.0554328208809595E-5 7 0.0 0.0 0.0 0.0 5.0554328208809595E-5 8 0.0 0.0 0.0 0.0 1.0110865641761919E-4 9 0.0 0.0 0.0 0.0 1.0110865641761919E-4 10 0.0 0.0 0.0 0.0 1.0110865641761919E-4 11 0.0 0.0 0.0 0.0 1.0110865641761919E-4 12 0.0 0.0 0.0 0.0 1.0110865641761919E-4 13 0.0 0.0 0.0 0.0 1.0110865641761919E-4 14 0.0 0.0 0.0 0.0 3.0332596925285757E-4 15 0.0 0.0 0.0 5.0554328208809595E-5 3.0332596925285757E-4 16 0.0 0.0 0.0 1.0110865641761919E-4 3.5388029746166716E-4 17 0.0 0.0 0.0 1.5166298462642878E-4 3.5388029746166716E-4 18 0.0 0.0 0.0 2.5277164104404797E-4 4.0443462567047676E-4 19 0.0 0.0 0.0 2.5277164104404797E-4 4.0443462567047676E-4 20 0.0 0.0 0.0 3.5388029746166716E-4 5.055432820880959E-4 21 0.0 0.0 0.0 3.5388029746166716E-4 5.560976102969055E-4 22 0.0 0.0 0.0 6.066519385057151E-4 5.560976102969055E-4 23 0.0 0.0 0.0 7.583149231321439E-4 7.077605949233343E-4 24 0.0 0.0 0.0 9.099779077585727E-4 7.077605949233343E-4 25 0.0 0.0 0.0 0.0011627495488026208 7.077605949233343E-4 26 0.0 0.0 0.0 0.0014660755180554784 7.077605949233343E-4 27 0.0 0.0 0.0 0.002224390441187622 7.077605949233343E-4 28 0.0 0.0 0.0 0.003235477005363814 7.077605949233343E-4 29 0.0 0.0 0.0 0.004600443867001674 7.077605949233343E-4 30 0.0 0.0 0.0 0.00748204057490382 7.077605949233343E-4 31 0.0 0.0 0.0 0.01364966861637859 7.077605949233343E-4 32 0.0 0.0 0.0 0.020676720237403124 7.583149231321439E-4 33 0.0 0.0 0.0 0.0279059891712629 7.583149231321439E-4 34 0.0 0.0 0.0 0.03513525810512267 7.583149231321439E-4 35 0.0 0.0 0.0 0.04509446076225816 7.583149231321439E-4 36 0.0 0.0 0.0 0.05768248848625175 7.583149231321439E-4 37 0.0 0.0 0.0 0.07739867648768749 7.583149231321439E-4 38 0.0 0.0 0.0 0.10297916656134515 8.088692513409535E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1885 0.0 25.3391 1 GGTATCA 915 0.0 25.258701 1 TATCAAC 2585 0.0 18.297432 2 CAACGCA 2565 0.0 18.096573 5 TCAACGC 2585 0.0 17.95656 4 ATCAACG 2650 0.0 17.76516 3 ACCGTTA 75 0.001291692 17.59913 8 TACACCG 190 3.274181E-11 17.367563 5 AACGCAG 2690 0.0 17.337433 6 GGACCGT 165 1.6625563E-9 17.332478 6 GTCTTAG 295 0.0 15.668957 1 TACGCCG 85 0.0029818183 15.5286455 5 TTAGACT 215 2.1645974E-10 15.348079 4 CTTAGAC 235 5.0931703E-11 14.977983 3 TAGCGTG 120 1.182118E-4 14.665942 5 ACGCAGA 3220 0.0 14.552075 7 GTGTATA 305 0.0 14.433542 1 GACCGTT 215 3.5506673E-9 14.324873 7 TAGGACG 215 3.5506673E-9 14.324873 4 TATACAG 415 0.0 14.312547 5 >>END_MODULE