##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062079_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 26927 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.700115126081627 32.0 32.0 32.0 32.0 32.0 2 31.256211237791064 32.0 32.0 32.0 32.0 32.0 3 31.466594867605007 32.0 32.0 32.0 32.0 32.0 4 31.618524157908418 32.0 32.0 32.0 32.0 32.0 5 31.604857577895793 32.0 32.0 32.0 32.0 32.0 6 35.180896497938875 36.0 36.0 36.0 36.0 36.0 7 35.183161882125745 36.0 36.0 36.0 36.0 36.0 8 35.09447766182642 36.0 36.0 36.0 36.0 36.0 9 35.10836706651317 36.0 36.0 36.0 36.0 36.0 10 35.02547628774093 36.0 36.0 36.0 36.0 36.0 11 35.162550599769745 36.0 36.0 36.0 36.0 36.0 12 35.07917703420359 36.0 36.0 36.0 36.0 36.0 13 35.10996397667768 36.0 36.0 36.0 36.0 36.0 14 35.072418019088644 36.0 36.0 36.0 36.0 36.0 15 35.08263081665243 36.0 36.0 36.0 36.0 36.0 16 35.11798566494596 36.0 36.0 36.0 36.0 36.0 17 35.061648159839564 36.0 36.0 36.0 36.0 36.0 18 35.07746871170201 36.0 36.0 36.0 36.0 36.0 19 34.94269692130575 36.0 36.0 36.0 36.0 36.0 20 34.85523823671408 36.0 36.0 36.0 32.0 36.0 21 34.81550116982954 36.0 36.0 36.0 32.0 36.0 22 34.87532959483047 36.0 36.0 36.0 36.0 36.0 23 34.89356408066253 36.0 36.0 36.0 36.0 36.0 24 34.93697775467003 36.0 36.0 36.0 36.0 36.0 25 34.90804768448026 36.0 36.0 36.0 36.0 36.0 26 34.90073160768002 36.0 36.0 36.0 36.0 36.0 27 34.87306421064359 36.0 36.0 36.0 32.0 36.0 28 34.85260147807034 36.0 36.0 36.0 32.0 36.0 29 34.76867085081888 36.0 36.0 36.0 32.0 36.0 30 34.79559549894158 36.0 36.0 36.0 32.0 36.0 31 34.7342815761132 36.0 36.0 36.0 32.0 36.0 32 34.614996100568206 36.0 36.0 36.0 32.0 36.0 33 34.516507594607646 36.0 36.0 36.0 32.0 36.0 34 34.45979871504438 36.0 36.0 36.0 32.0 36.0 35 34.36517250343521 36.0 36.0 36.0 32.0 36.0 36 34.292643072009504 36.0 36.0 36.0 32.0 36.0 37 34.291120436736364 36.0 36.0 36.0 32.0 36.0 38 34.196717049801315 36.0 36.0 36.0 32.0 36.0 39 34.13302633044899 36.0 36.0 36.0 32.0 36.0 40 34.020908381921494 36.0 36.0 36.0 32.0 36.0 41 33.925019497158985 36.0 36.0 36.0 32.0 36.0 42 33.82422846956586 36.0 36.0 36.0 32.0 36.0 43 33.74256322650128 36.0 36.0 36.0 32.0 36.0 44 33.562038103019276 36.0 36.0 36.0 21.0 36.0 45 33.37130018197348 36.0 36.0 36.0 21.0 36.0 46 33.11984253723029 36.0 36.0 36.0 14.0 36.0 47 32.94648494076577 36.0 36.0 36.0 14.0 36.0 48 32.82942771196197 36.0 36.0 36.0 14.0 36.0 49 32.671704980131466 36.0 36.0 36.0 14.0 36.0 50 32.28952352657184 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 2.0 21 4.0 22 5.0 23 16.0 24 39.0 25 63.0 26 147.0 27 271.0 28 530.0 29 732.0 30 915.0 31 1231.0 32 1611.0 33 2318.0 34 4144.0 35 14897.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.57652303120357 20.089153046062407 14.179049034175334 21.155274888558694 2 14.240083197147527 22.47437230723518 40.81117218838211 22.47437230723518 3 18.421541318477253 29.567316620241414 29.5636025998143 22.447539461467038 4 10.992683923199763 16.919820254762875 36.55438778920786 35.5331080328295 5 11.59059679875218 39.477104764734285 31.217736844059868 17.71456159245367 6 27.775095628922642 37.50510639878189 18.639283990047165 16.080513982248302 7 25.505997697478367 34.59353065696141 21.112637872767113 18.787833772793107 8 27.74538567237345 31.284584246295537 20.169346752330377 20.800683329000634 9 28.38786348274966 13.919114643294833 21.547145987298993 36.14587588665651 10 17.911390054592044 26.38244141567943 29.713670293757193 25.99249823597133 11 31.856500909867417 24.195045864745424 24.001931147175696 19.94652207821146 12 26.360158948267536 26.063059382775656 29.275448434656663 18.301333234300145 13 29.048910015969103 22.590708211089243 28.58469194488803 19.77568982805363 14 23.559995543506517 20.518438741783342 31.110038251569055 24.811527463141086 15 23.50057563040814 26.49385375273889 29.79908641883611 20.20648419801686 16 19.94652207821146 27.975637835629662 29.813941397110703 22.26389868904817 17 18.661566457459056 26.360158948267536 30.411854272663124 24.56642032161028 18 18.902959854421216 24.005644891744346 36.038177294165706 21.053217959668736 19 21.591710922122775 22.549857020834107 36.29442566940246 19.56400638764066 20 23.686262858840568 21.368886248003864 35.86734504400788 19.0775058491477 21 23.961079956920564 21.201767742414678 35.22486723363167 19.61228506703309 22 22.271326178185465 23.043785048464365 35.02432502692464 19.66056374642552 23 20.648419801686043 23.879377576410292 36.15701712036246 19.315185501541205 24 20.793255839863335 23.303747168269766 36.09388346269544 19.809113529171462 25 20.455305084116315 24.01678612545029 36.00103984847922 19.526868941954174 26 19.538010175660116 23.741969027370295 36.86634233297434 19.853678463995248 27 19.3300404798158 25.416867827830803 35.59624169049653 19.65685000185687 28 18.777389883384092 24.463343979796477 36.17321547946223 20.5860506573572 29 19.05221718784818 24.74931293173884 35.95409641238951 20.244373468023472 30 19.31889924610985 24.273034500687043 36.13473465295057 20.273331600252533 31 19.200772487558492 25.18755106588427 35.519572160736836 20.092104285820398 32 18.839826196754185 25.661974969361605 35.85991755487058 19.63828127901363 33 19.24462435473688 24.919226055631892 35.96761614736138 19.86853344226984 34 19.43402532773796 24.659263935826495 35.61852415790842 20.288186578527128 35 19.289189289560664 25.364875403869725 35.158019831396 20.187915475173618 36 19.597430088758493 26.100196828462142 35.0057563040814 19.29661677869796 37 19.337467968953096 26.219036654658893 34.15159505329223 20.291900323095778 38 19.757121105210384 26.475285029895645 34.56753444498087 19.2000594199131 39 20.20648419801686 26.519849964719427 33.783934340996026 19.489731496267687 40 19.76826233891633 26.972926802094555 34.140453819586284 19.11835703940283 41 20.210948525588652 26.77337889029191 33.859466686474036 19.1562058976454 42 19.3300404798158 27.537415976529132 33.30486129164036 19.827682252014707 43 19.285475544992014 27.867939243138856 33.17859397630631 19.667991235562816 44 19.096783777761274 27.683280101017605 32.99413206566144 20.22580405555968 45 19.30033052326661 28.183607531473985 32.00505069261336 20.511011252646043 46 20.388457681880638 28.049912727002635 31.225164333197164 20.33646525791956 47 20.22876666542875 28.343298547925873 30.749805028410144 20.67812975823523 48 20.23769730733519 28.820798514391825 30.11699164345404 20.824512534818943 49 20.642525533890435 28.73909006499536 30.332404828226554 20.28597957288765 50 19.916056903019722 30.004085725959218 29.992942836979537 20.086914534041526 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 515.0 1 278.0 2 41.0 3 97.5 4 154.0 5 133.5 6 113.0 7 80.0 8 47.0 9 70.0 10 93.0 11 167.5 12 242.0 13 404.0 14 566.0 15 721.0 16 876.0 17 847.0 18 818.0 19 733.5 20 649.0 21 615.0 22 581.0 23 501.0 24 421.0 25 363.0 26 305.0 27 319.5 28 334.0 29 408.0 30 482.0 31 602.0 32 722.0 33 842.5 34 963.0 35 998.5 36 1034.0 37 1028.0 38 1022.0 39 1055.0 40 1088.0 41 1108.5 42 1129.0 43 1167.0 44 1205.0 45 1245.5 46 1286.0 47 1369.0 48 1452.0 49 1481.5 50 1511.0 51 1576.0 52 1641.0 53 1564.5 54 1488.0 55 1467.0 56 1446.0 57 1313.0 58 1180.0 59 1047.5 60 915.0 61 809.5 62 704.0 63 579.0 64 454.0 65 428.0 66 402.0 67 368.0 68 334.0 69 295.5 70 257.0 71 219.5 72 182.0 73 150.0 74 118.0 75 93.5 76 69.0 77 56.0 78 43.0 79 33.5 80 24.0 81 19.0 82 14.0 83 9.5 84 5.0 85 3.0 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.025996211980539977 2 0.011141233705945705 3 0.007427489137297137 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0037137445686485685 29 0.0037137445686485685 30 0.0 31 0.0037137445686485685 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0037137445686485685 42 0.0 43 0.0 44 0.0037137445686485685 45 0.0 46 0.0 47 0.0 48 0.007427489137297137 49 0.007427489137297137 50 0.014854978274594274 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 26927.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.11750287815204 #Duplication Level Percentage of deduplicated Percentage of total 1 81.43059644531677 55.46848887733502 2 12.2941882019409 16.748988004605042 3 3.3529604187111546 6.851858729156608 4 1.0903936321011884 2.970995654918855 5 0.5888125613346418 2.005422067070227 6 0.32711808963035655 1.3369480447134845 7 0.20717479009922582 0.9878560552605192 8 0.13084723585214264 0.7130389571805251 9 0.08177952240758914 0.5013555167675567 >10 0.4307054846799695 5.236379841794482 >50 0.03271180896303566 1.6377613547740186 >100 0.03271180896303566 5.540906896423664 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 403 1.496639061165373 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 292 1.0844134140453818 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 243 0.9024399301816021 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 234 0.8690162290637651 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 204 0.7576038920043079 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 116 0.4307943699632339 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 90 0.3342370111783711 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 80 0.29709956549188543 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 72 0.2673896089426969 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 69 0.2562483752367512 No Hit GTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 65 0.24139339696215692 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 65 0.24139339696215692 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 48 0.17825973929513128 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG 41 0.1522635273145913 No Hit ATACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 38 0.1411222936086456 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGT 38 0.1411222936086456 No Hit ATATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAA 36 0.13369480447134846 No Hit GGTATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAA 36 0.13369480447134846 No Hit GTACATGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 35 0.1299810599026999 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34 0.12626731533405133 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31 0.11512608162810563 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG 30 0.11141233705945705 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0037137445686485685 0.0 22 0.0 0.0 0.0 0.0037137445686485685 0.0 23 0.0 0.0 0.0 0.014854978274594274 0.0 24 0.0 0.0 0.0 0.018568722843242843 0.0 25 0.0 0.0 0.0 0.018568722843242843 0.0 26 0.0 0.0 0.0 0.018568722843242843 0.0 27 0.0 0.0 0.0 0.025996211980539977 0.0 28 0.0 0.0 0.0 0.033423701117837115 0.0 29 0.0 0.0 0.0 0.04085119025513425 0.0 30 0.0 0.0 0.0 0.07798863594161994 0.0 31 0.0 0.0 0.0 0.1411222936086456 0.0 32 0.0 0.0 0.0 0.17083225015783415 0.0 33 0.0 0.0 0.0 0.21168344041296838 0.0 34 0.0 0.0 0.0 0.23767965239350838 0.0 35 0.0 0.0 0.0 0.27853084264864264 0.0 36 0.0 0.0 0.0 0.326809522041074 0.0 37 0.0 0.0 0.0 0.39365692427674825 0.0 38 0.0 0.0 0.0 0.47535930478701677 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGAT 30 0.0056493296 29.330854 18 ATGGGTG 40 6.857203E-4 27.497675 5 TGGGTGG 40 6.857203E-4 27.497675 6 CATGGGT 45 0.0013637092 24.442379 4 ATGGGGT 75 0.0012476435 17.598515 5 GAGTACA 260 0.0 16.921646 12 AGTACAT 265 0.0 16.60237 13 CATGGGA 120 5.9571885E-6 16.498606 17 AACGCAG 430 0.0 14.835956 6 GGTATCA 285 0.0 14.692738 1 GTATCAA 425 0.0 14.519882 1 GGGTGGT 100 0.008477136 13.198885 20 ACATGGG 335 0.0 13.133218 16 ACGCAGA 490 0.0 13.019308 7 CGCAGAG 490 0.0 13.019308 8 AGAGTAC 510 0.0 12.508747 11 GCAGAGT 510 0.0 12.508747 9 GTACATG 355 1.8189894E-12 12.39332 14 TACATGG 355 1.8189894E-12 12.39332 15 CAGAGTA 515 0.0 12.387302 10 >>END_MODULE