##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062078_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1218000 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.317379310344826 32.0 32.0 32.0 32.0 32.0 2 31.48040804597701 32.0 32.0 32.0 32.0 32.0 3 31.591926929392447 32.0 32.0 32.0 32.0 32.0 4 31.663452380952382 32.0 32.0 32.0 32.0 32.0 5 31.642816912972087 32.0 32.0 32.0 32.0 32.0 6 35.28821428571428 36.0 36.0 36.0 36.0 36.0 7 35.28926272577997 36.0 36.0 36.0 36.0 36.0 8 35.24440558292282 36.0 36.0 36.0 36.0 36.0 9 35.325658456486046 36.0 36.0 36.0 36.0 36.0 10 35.21011001642036 36.0 36.0 36.0 36.0 36.0 11 35.31826765188834 36.0 36.0 36.0 36.0 36.0 12 35.244851395730706 36.0 36.0 36.0 36.0 36.0 13 35.2813776683087 36.0 36.0 36.0 36.0 36.0 14 35.243802955665025 36.0 36.0 36.0 36.0 36.0 15 35.22806239737274 36.0 36.0 36.0 36.0 36.0 16 35.23607963875205 36.0 36.0 36.0 36.0 36.0 17 35.21938998357964 36.0 36.0 36.0 36.0 36.0 18 35.216820197044335 36.0 36.0 36.0 36.0 36.0 19 35.205568965517244 36.0 36.0 36.0 36.0 36.0 20 35.20351724137931 36.0 36.0 36.0 36.0 36.0 21 35.193865353037765 36.0 36.0 36.0 36.0 36.0 22 35.180871100164204 36.0 36.0 36.0 36.0 36.0 23 35.15466912972085 36.0 36.0 36.0 36.0 36.0 24 35.14177011494253 36.0 36.0 36.0 36.0 36.0 25 35.121648604269296 36.0 36.0 36.0 36.0 36.0 26 35.0839039408867 36.0 36.0 36.0 36.0 36.0 27 35.06826354679803 36.0 36.0 36.0 36.0 36.0 28 35.04846223316913 36.0 36.0 36.0 36.0 36.0 29 35.03670443349754 36.0 36.0 36.0 36.0 36.0 30 35.01719786535304 36.0 36.0 36.0 36.0 36.0 31 35.01995812807882 36.0 36.0 36.0 36.0 36.0 32 34.983865353037764 36.0 36.0 36.0 36.0 36.0 33 34.965245484400654 36.0 36.0 36.0 36.0 36.0 34 34.95752216748768 36.0 36.0 36.0 36.0 36.0 35 34.949841543513955 36.0 36.0 36.0 36.0 36.0 36 34.927096880131366 36.0 36.0 36.0 36.0 36.0 37 34.91065763546798 36.0 36.0 36.0 36.0 36.0 38 34.8941091954023 36.0 36.0 36.0 32.0 36.0 39 34.88187520525452 36.0 36.0 36.0 32.0 36.0 40 34.868910509031195 36.0 36.0 36.0 32.0 36.0 41 34.846889162561574 36.0 36.0 36.0 32.0 36.0 42 34.81661165845649 36.0 36.0 36.0 32.0 36.0 43 34.8128842364532 36.0 36.0 36.0 32.0 36.0 44 34.76179802955665 36.0 36.0 36.0 32.0 36.0 45 34.75988095238095 36.0 36.0 36.0 32.0 36.0 46 34.73581855500821 36.0 36.0 36.0 32.0 36.0 47 34.70976765188834 36.0 36.0 36.0 32.0 36.0 48 34.69386617405583 36.0 36.0 36.0 32.0 36.0 49 34.67353530377668 36.0 36.0 36.0 32.0 36.0 50 34.26891954022989 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 0.0 19 2.0 20 13.0 21 31.0 22 78.0 23 228.0 24 507.0 25 1294.0 26 2751.0 27 5195.0 28 9077.0 29 14448.0 30 21792.0 31 32431.0 32 48956.0 33 83292.0 34 191699.0 35 806204.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.87287832151293 17.991521498470846 12.056159807106699 26.07944037290953 2 16.283083390465087 19.66386002652008 37.00101400309538 27.052042579919455 3 19.019438487482716 22.758777532931145 28.090075829477275 30.131708150108867 4 12.919725648153774 15.785247594823637 34.93995885050714 36.35506790651545 5 14.968883415435139 36.212479474548445 32.89540229885057 15.923234811165846 6 35.34685607037121 34.42271662186637 16.29173446918632 13.938692838576088 7 31.29770114942529 29.830459770114942 19.624712643678162 19.24712643678161 8 28.376518883415436 33.00582922824302 18.720689655172414 19.89696223316913 9 26.87857142857143 14.8123973727422 18.660098522167488 39.64893267651888 10 16.994991789819373 26.474548440065682 30.418637110016423 26.11182266009852 11 37.30878489326765 21.405500821018062 21.63727422003284 19.648440065681445 12 24.799096880131362 23.49679802955665 28.085960591133002 23.61814449917898 13 29.460673234811164 19.348275862068963 24.98711001642036 26.203940886699506 14 23.691954022988508 19.496141215106732 24.858538587848933 31.95336617405583 15 25.345977011494252 26.985960591133008 21.9252052545156 25.742857142857144 16 25.99011486136996 25.88198589479388 23.342309871181207 24.785589372654947 17 24.316995073891626 26.065188834154352 24.701149425287355 24.916666666666668 18 25.002565683551463 25.207574062047673 25.626375719520293 24.16348453488057 19 25.672660098522165 25.0004105090312 25.12577996715928 24.20114942528736 20 25.89121803355676 24.485055780150343 24.76863635020148 24.855089836091416 21 26.57857142857143 24.291297208538587 24.529556650246306 24.600574712643677 22 25.910673234811167 24.320935960591132 24.91863711001642 24.84975369458128 23 24.61847290640394 24.34384236453202 25.56009852216749 25.477586206896554 24 24.820544061636127 24.78778509130229 25.333275314104338 25.05839553295725 25 25.020258670587857 24.28117639041804 25.443330320189624 25.25523461880448 26 24.76826651034406 25.177381826183055 25.55160370248129 24.5027479609916 27 25.355645375152815 24.729453356617462 25.020915486655547 24.893985781574173 28 24.85632042351813 24.662558251805436 25.453042230301122 25.028079094375315 29 24.676764127304196 24.91075504353052 25.40115074269538 25.011330086469908 30 24.732138898604415 25.091750124386074 25.557192142412617 24.618918834596897 31 25.30186955097443 24.756464117609873 24.810897927984808 25.130768403430892 32 25.176130201290487 24.853631923388598 24.63310484231821 25.337133033002708 33 24.64016683155514 24.724321528413498 25.199446631554316 25.436065008477048 34 25.340170822280296 24.780807083139365 25.31751055631774 24.561511538262597 35 25.801027587894232 24.468923594291617 25.36547679060228 24.364572027211867 36 24.6522156066194 25.04811181645917 25.017241435932462 25.28243114098897 37 25.548347793102828 24.86730044984429 24.937827233190774 24.64652452386211 38 24.930459770114943 24.648111658456486 25.274137931034485 25.147290640394086 39 25.582456955616113 24.594843787331065 24.73975502201583 25.08294423503699 40 25.620197044334976 24.708949096880133 25.081855500821014 24.588998357963877 41 24.69439479537239 25.145546813487435 25.4544155836692 24.70564280747098 42 25.770849515001537 25.095694212039653 24.97130405224551 24.162152220713303 43 25.35061049454533 24.371750166468654 25.09879329724528 25.178846041740734 44 24.765138913292294 25.035674582127076 24.902172003211945 25.297014501368686 45 25.0456907805611 25.12771250523412 24.95915334532049 24.867443368884288 46 24.91528916629104 24.905272474541594 24.992384851149495 25.187053508017872 47 25.03596094542803 24.778733452217917 25.32159594347399 24.863709658880055 48 25.664189827168606 25.260314462826884 24.381706966624243 24.69378874338027 49 25.056139276310336 25.351635079514562 24.49150336671448 25.100722277460623 50 25.204826676278202 25.38988703436261 24.614751790052555 24.79053449930664 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 361.0 1 212.5 2 64.0 3 161.5 4 259.0 5 249.5 6 240.0 7 188.5 8 137.0 9 180.5 10 224.0 11 407.0 12 590.0 13 1091.5 14 1593.0 15 1976.5 16 2360.0 17 2373.0 18 2386.0 19 2346.0 20 2306.0 21 2668.5 22 3031.0 23 3658.5 24 4286.0 25 5355.5 26 6425.0 27 8249.5 28 10074.0 29 11759.0 30 13444.0 31 15585.0 32 17726.0 33 20502.0 34 23278.0 35 26996.5 36 30715.0 37 36260.5 38 41806.0 39 46410.5 40 51015.0 41 55776.5 42 60538.0 43 63912.0 44 67286.0 45 73857.0 46 80428.0 47 85675.0 48 90922.0 49 94505.5 50 98089.0 51 96316.5 52 94544.0 53 93822.0 54 93100.0 55 93283.5 56 93467.0 57 89842.5 58 86218.0 59 78577.0 60 70936.0 61 62167.5 62 53399.0 63 45639.0 64 37879.0 65 31852.0 66 25825.0 67 21889.5 68 17954.0 69 15900.5 70 13847.0 71 10723.0 72 7599.0 73 6591.0 74 5583.0 75 4134.0 76 2685.0 77 2376.0 78 2067.0 79 1745.5 80 1424.0 81 1122.0 82 820.0 83 696.5 84 573.0 85 425.5 86 278.0 87 198.0 88 118.0 89 76.0 90 34.0 91 25.0 92 16.0 93 15.0 94 14.0 95 17.0 96 20.0 97 17.0 98 14.0 99 8.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.027257799671592777 2 0.00451559934318555 3 3.284072249589491E-4 4 1.6420361247947455E-4 5 0.0 6 1.6420361247947455E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.210180623973727E-4 17 0.0 18 8.210180623973728E-5 19 0.0 20 3.284072249589491E-4 21 0.0 22 0.0 23 0.0 24 0.0010673234811165847 25 2.463054187192118E-4 26 4.926108374384236E-4 27 2.463054187192118E-4 28 9.852216748768472E-4 29 3.284072249589491E-4 30 0.0014778325123152708 31 5.747126436781609E-4 32 7.389162561576354E-4 33 4.1050903119868636E-4 34 7.389162561576354E-4 35 1.6420361247947455E-4 36 3.284072249589491E-4 37 0.0018883415435139571 38 0.0 39 0.0010673234811165847 40 0.0 41 5.747126436781609E-4 42 0.004761904761904762 43 0.004351395730706076 44 0.0037766830870279143 45 0.0024630541871921183 46 0.00270935960591133 47 9.852216748768472E-4 48 0.004105090311986864 49 0.0038587848932676518 50 0.0015599343185550081 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1218000.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.96872779099306 #Duplication Level Percentage of deduplicated Percentage of total 1 77.10313108225394 45.46673548622689 2 14.357761471359007 16.933178557851544 3 4.181371319275089 7.397104413581948 4 1.6259888125375888 3.835299667109165 5 0.7923828296518417 2.3362903693998134 6 0.4398573830897408 1.5562698174166487 7 0.269248129041305 1.1114053740769623 8 0.1998080947624924 0.9425943320389087 9 0.14824053167480614 0.7867400003931355 >10 0.7566589147625602 8.1459199354032 >50 0.06547275744150602 2.7256247980893527 >100 0.05447694366174264 6.33898088875775 >500 0.004761470915161627 1.868329061389119 >1k 8.402595732638165E-4 0.5555272982657622 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1373 0.11272577996715928 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 1.6420361247947455E-4 0.0 22 0.0 0.0 0.0 1.6420361247947455E-4 0.0 23 0.0 0.0 0.0 2.463054187192118E-4 0.0 24 0.0 0.0 0.0 4.1050903119868636E-4 0.0 25 0.0 0.0 0.0 6.568144499178982E-4 0.0 26 0.0 0.0 0.0 0.0010673234811165845 0.0 27 0.0 0.0 0.0 0.0013136288998357964 0.0 28 0.0 0.0 0.0 0.002134646962233169 0.0 29 0.0 0.0 0.0 0.003037766830870279 0.0 30 0.0 0.0 0.0 0.005747126436781609 0.0 31 0.0 0.0 0.0 0.011001642036124795 0.0 32 0.0 0.0 0.0 0.01683087027914614 0.0 33 0.0 0.0 0.0 0.02257799671592775 0.0 34 0.0 0.0 0.0 0.02889983579638752 0.0 35 0.0 0.0 0.0 0.03555008210180624 0.0 36 0.0 0.0 0.0 0.04384236453201971 0.0 37 0.0 0.0 0.0 0.05845648604269294 0.0 38 0.0 0.0 0.0 0.07931034482758621 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1635 0.0 24.897055 1 GGTATCA 800 0.0 24.203974 1 CGTTGCG 55 0.0044846972 19.999178 16 GTATTAT 125 2.2837412E-8 19.363178 1 TCGCGTG 60 0.00741389 18.332579 25 CTAGATA 265 0.0 18.263403 3 TACGCTC 85 1.430844E-4 18.117647 34 TAACGGC 75 0.0012908782 17.6 36 CTATTCC 240 0.0 17.41595 4 GTATTAC 115 4.2662577E-6 17.220219 1 TCGATTT 115 4.2746105E-6 17.216684 30 TAGGACG 115 4.2746105E-6 17.216684 4 ATCGATT 115 4.2746105E-6 17.216684 29 ATCAACG 2325 0.0 17.03156 3 CCTATTC 300 0.0 16.865974 3 GTCCTAA 235 0.0 16.853832 1 TCAACGC 2345 0.0 16.792488 4 CAACGCA 2410 0.0 16.522142 5 AACGCAG 2410 0.0 16.522142 6 GTATTAG 270 0.0 16.298973 1 >>END_MODULE