##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062076_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 958883 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.227438592612447 32.0 32.0 32.0 32.0 32.0 2 31.438530039639872 32.0 32.0 32.0 32.0 32.0 3 31.574492404182784 32.0 32.0 32.0 32.0 32.0 4 31.65518420912666 32.0 32.0 32.0 32.0 32.0 5 31.620918297644238 32.0 32.0 32.0 32.0 32.0 6 35.27667191930611 36.0 36.0 36.0 36.0 36.0 7 35.27410747713746 36.0 36.0 36.0 36.0 36.0 8 35.226483314439825 36.0 36.0 36.0 36.0 36.0 9 35.31217572946856 36.0 36.0 36.0 36.0 36.0 10 35.19148321536621 36.0 36.0 36.0 36.0 36.0 11 35.31168661870113 36.0 36.0 36.0 36.0 36.0 12 35.23093432671139 36.0 36.0 36.0 36.0 36.0 13 35.26793362693884 36.0 36.0 36.0 36.0 36.0 14 35.22738853436759 36.0 36.0 36.0 36.0 36.0 15 35.204288740127836 36.0 36.0 36.0 36.0 36.0 16 35.215715577395784 36.0 36.0 36.0 36.0 36.0 17 35.19231751944711 36.0 36.0 36.0 36.0 36.0 18 35.19355020372663 36.0 36.0 36.0 36.0 36.0 19 35.186299058383554 36.0 36.0 36.0 36.0 36.0 20 35.17198135747531 36.0 36.0 36.0 36.0 36.0 21 35.159647214519396 36.0 36.0 36.0 36.0 36.0 22 35.14115277880617 36.0 36.0 36.0 36.0 36.0 23 35.11405458225873 36.0 36.0 36.0 36.0 36.0 24 35.093695476924715 36.0 36.0 36.0 36.0 36.0 25 35.066905972887206 36.0 36.0 36.0 36.0 36.0 26 35.029883729297524 36.0 36.0 36.0 36.0 36.0 27 35.0228578460563 36.0 36.0 36.0 36.0 36.0 28 34.98732587813112 36.0 36.0 36.0 36.0 36.0 29 34.95886672305172 36.0 36.0 36.0 36.0 36.0 30 34.93607874996219 36.0 36.0 36.0 36.0 36.0 31 34.9454146126274 36.0 36.0 36.0 36.0 36.0 32 34.911745228562815 36.0 36.0 36.0 32.0 36.0 33 34.8923153293989 36.0 36.0 36.0 32.0 36.0 34 34.881424532502926 36.0 36.0 36.0 32.0 36.0 35 34.857921143664036 36.0 36.0 36.0 32.0 36.0 36 34.83118899803208 36.0 36.0 36.0 32.0 36.0 37 34.8143141551159 36.0 36.0 36.0 32.0 36.0 38 34.78582997091407 36.0 36.0 36.0 32.0 36.0 39 34.75278527203006 36.0 36.0 36.0 32.0 36.0 40 34.739045326697834 36.0 36.0 36.0 32.0 36.0 41 34.719174289251136 36.0 36.0 36.0 32.0 36.0 42 34.67127897772721 36.0 36.0 36.0 32.0 36.0 43 34.679599075173925 36.0 36.0 36.0 32.0 36.0 44 34.6066965417053 36.0 36.0 36.0 32.0 36.0 45 34.59669740729578 36.0 36.0 36.0 32.0 36.0 46 34.553815220417924 36.0 36.0 36.0 32.0 36.0 47 34.528801741192616 36.0 36.0 36.0 32.0 36.0 48 34.49431682488896 36.0 36.0 36.0 32.0 36.0 49 34.46531850079728 36.0 36.0 36.0 32.0 36.0 50 34.064959958618516 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 8.0 21 19.0 22 67.0 23 192.0 24 481.0 25 1143.0 26 2417.0 27 4662.0 28 7912.0 29 12607.0 30 18595.0 31 27654.0 32 41601.0 33 71034.0 34 160637.0 35 609851.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.36512903966118 18.07546264421773 11.451670109115186 26.107738207005905 2 16.224765317583895 19.670980519351847 37.68893746564892 26.415316697415335 3 19.286459202402803 23.021128816953112 28.225221091273152 29.467190889370933 4 12.363760750790242 15.598670536447095 35.44186308444304 36.59570562831962 5 14.390181075271958 36.91847701961553 33.160145711207726 15.531196193904783 6 35.24399795177921 35.26183123870428 16.011371588340996 13.482799221175515 7 30.85183489539391 29.989685915799946 19.75934498786609 19.39913420094005 8 28.173614507713662 33.96045190080542 18.54960407056961 19.31632952091131 9 26.86730289305369 13.881672737966987 18.692582932432842 40.55844143654648 10 16.853585738391168 26.590028804378434 30.49989466899994 26.05649078823046 11 38.14688549072201 20.800660768832067 21.543087112817727 19.50936662762819 12 24.59601432082955 23.504744583020035 28.666375355491752 23.232865740658664 13 30.01242070200431 19.181902275877246 24.921288624368145 25.884388397750296 14 23.201787913645354 19.99096865832432 24.667138743725772 32.140104684304546 15 25.284940915627875 27.883276687562507 21.585115180892767 25.24666721591685 16 25.598983808091575 25.791084125755837 24.151139774360345 24.458792291792246 17 23.83711047124623 26.317496503744458 25.17376989684873 24.671623128160576 18 24.64930549399666 24.94871637102754 26.75164748983974 23.65033064513606 19 25.940703923210652 24.574113838706076 24.869040331302152 24.61614190678112 20 25.890985543580964 24.430639015019576 24.95385250739924 24.72452293400022 21 26.880443182327774 24.040472090964172 24.304946484607612 24.774138242100445 22 25.98930213592274 24.626257843761962 25.050084316856175 24.334355703459128 23 24.33677970803498 24.573826602230515 25.86971076733112 25.21968292240338 24 25.11138040789424 24.79705405078446 25.608107826246563 24.48345771507473 25 24.87983388971103 24.63298365490608 25.526108036346535 24.961074419036354 26 24.048990693270035 25.967382643845504 26.097117875512577 23.88650878737188 27 24.804198240026366 24.853943880243367 25.605968642517606 24.735889237212657 28 24.32222161965985 25.02701101715773 25.833795684077476 24.81697167910494 29 24.307004004672116 24.792466210579008 25.605185216085435 25.29534456866344 30 24.108589866864676 25.33169112938718 25.986730269044735 24.57298873470341 31 25.228131211686993 24.83141755259793 24.952913717907805 24.987537517807272 32 24.822266046635804 24.842289469869442 25.04460947545931 25.29083500803544 33 24.228787752377773 24.683902052394462 25.817307692307693 25.270002502920075 34 25.120766397323536 24.92334775299413 25.895319102782842 24.060566746899497 35 25.409540297013184 24.78068162856666 25.92190889370933 23.88786918071083 36 23.797764058067745 25.571917236776237 25.58891623560821 25.04140246954781 37 25.106063007892672 25.156122244656174 25.178857481352935 24.558957266098215 38 24.42842348857994 24.990535863082357 25.54878958121064 25.032251067127063 39 25.66082993523627 24.134449925433064 25.148351705653532 25.05636843367714 40 25.98786920601284 24.655797063663726 25.426069109650612 23.930264620672826 41 24.33466301655586 25.17669143527571 26.476756615825835 24.01188893234259 42 25.7200457224862 25.72682483198238 25.28524406880066 23.26788537673076 43 24.70936083893475 24.74179603372843 25.74332392956035 24.80551919777647 44 24.095869109734693 25.469182321721146 25.316916427925566 25.118032140618595 45 24.382864758996565 25.626417038460016 25.281113315103465 24.709604887439955 46 24.297287601057928 25.10867116647338 25.208477602476286 25.385563629992408 47 24.92796245600313 24.857046017468388 25.706270368921913 24.50872115760657 48 25.44663250045367 25.37769517814197 24.435099839181014 24.74057248222335 49 24.657919986650537 25.76279671269451 24.693066622168452 24.886216678486505 50 24.723162569118102 25.930004818191488 24.635454797646386 24.71137781504402 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 584.0 1 319.0 2 54.0 3 168.5 4 283.0 5 270.5 6 258.0 7 197.0 8 136.0 9 199.5 10 263.0 11 413.5 12 564.0 13 1048.0 14 1532.0 15 1948.5 16 2365.0 17 2347.5 18 2330.0 19 2289.5 20 2249.0 21 2609.5 22 2970.0 23 3296.0 24 3622.0 25 4814.5 26 6007.0 27 8252.5 28 10498.0 29 12154.5 30 13811.0 31 15479.0 32 17147.0 33 20107.0 34 23067.0 35 27249.5 36 31432.0 37 35594.5 38 39757.0 39 41496.5 40 43236.0 41 45396.0 42 47556.0 43 48689.0 44 49822.0 45 53829.0 46 57836.0 47 61787.5 48 65739.0 49 68758.0 50 71777.0 51 68868.0 52 65959.0 53 65098.5 54 64238.0 55 66458.5 56 68679.0 57 66665.5 58 64652.0 59 59963.0 60 55274.0 61 48624.5 62 41975.0 63 36470.0 64 30965.0 65 26243.5 66 21522.0 67 18673.0 68 15824.0 69 14503.0 70 13182.0 71 10288.5 72 7395.0 73 6730.5 74 6066.0 75 4325.5 76 2585.0 77 2347.5 78 2110.0 79 1788.0 80 1466.0 81 1201.0 82 936.0 83 768.0 84 600.0 85 487.0 86 374.0 87 240.0 88 106.0 89 73.5 90 41.0 91 29.5 92 18.0 93 12.0 94 6.0 95 6.5 96 7.0 97 6.0 98 5.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02742774665939432 2 0.0035457923438000256 3 3.128640303352964E-4 4 0.0 5 0.0 6 2.0857602022353094E-4 7 0.0 8 0.0 9 0.0 10 1.0428801011176547E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.38592091005889E-4 17 0.0 18 0.0 19 0.0 20 1.0428801011176547E-4 21 0.0 22 0.0 23 1.0428801011176547E-4 24 7.300160707823582E-4 25 2.0857602022353094E-4 26 7.300160707823582E-4 27 5.214400505588273E-4 28 0.0015643201516764818 29 3.128640303352964E-4 30 9.38592091005889E-4 31 5.214400505588273E-4 32 6.257280606705928E-4 33 3.128640303352964E-4 34 7.300160707823582E-4 35 3.128640303352964E-4 36 3.128640303352964E-4 37 0.001981472192123544 38 0.0 39 0.001355744131452951 40 1.0428801011176547E-4 41 8.343040808941238E-4 42 0.0057358405561471005 43 0.005005824485364742 44 0.0035457923438000256 45 0.0017728961719000128 46 0.0028157762730176674 47 8.343040808941238E-4 48 0.004275808414582384 49 0.0044843844348059145 50 0.0017728961719000128 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 958883.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.9064691248918 #Duplication Level Percentage of deduplicated Percentage of total 1 73.21779597200812 38.00477266013666 2 15.694972143944428 16.29341174011377 3 5.274847920096824 8.213961921090165 4 2.206849216342711 4.581990028455383 5 1.0801616564121141 2.8033688834223693 6 0.6081447727162116 1.8939988721075027 7 0.3800740898435167 1.3809812806743695 8 0.2643011451842871 1.0975151385745394 9 0.18015198835346152 0.8415948259131134 >10 0.9096160949137949 8.711351275888992 >50 0.09144534868831684 3.33975095957208 >100 0.08114348006190217 8.652986196736446 >500 0.008477676927773133 2.8992763193411997 >1k 0.0020184945066126503 1.285039897973396 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1622 0.1691551524012836 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1273 0.13275863687227743 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1255 0.13088145269026563 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1226 0.12785710039702444 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1224 0.1276485243768009 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1152 0.1201397876487538 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 1146 0.11951405958808323 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1144 0.1193054835678597 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1134 0.11826260346674204 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1089 0.11356964301171257 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAAT 994 0.10366228205109487 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 969 0.10105508179830074 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 961 0.10022077771740662 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 1.0428801011176546E-4 4 0.0 0.0 0.0 0.0 1.0428801011176546E-4 5 0.0 0.0 0.0 0.0 1.0428801011176546E-4 6 0.0 0.0 0.0 0.0 2.0857602022353092E-4 7 0.0 0.0 0.0 0.0 2.0857602022353092E-4 8 0.0 0.0 0.0 0.0 2.0857602022353092E-4 9 0.0 0.0 0.0 0.0 2.0857602022353092E-4 10 0.0 0.0 0.0 1.0428801011176546E-4 2.0857602022353092E-4 11 0.0 0.0 0.0 1.0428801011176546E-4 2.0857602022353092E-4 12 0.0 0.0 0.0 1.0428801011176546E-4 3.128640303352964E-4 13 0.0 0.0 0.0 1.0428801011176546E-4 3.128640303352964E-4 14 0.0 0.0 0.0 1.0428801011176546E-4 3.128640303352964E-4 15 0.0 0.0 0.0 1.0428801011176546E-4 3.128640303352964E-4 16 0.0 0.0 0.0 1.0428801011176546E-4 3.128640303352964E-4 17 0.0 0.0 0.0 1.0428801011176546E-4 3.128640303352964E-4 18 0.0 0.0 0.0 3.128640303352964E-4 3.128640303352964E-4 19 0.0 0.0 0.0 3.128640303352964E-4 3.128640303352964E-4 20 0.0 0.0 0.0 4.1715204044706183E-4 3.128640303352964E-4 21 0.0 0.0 0.0 5.214400505588273E-4 3.128640303352964E-4 22 0.0 0.0 0.0 7.300160707823583E-4 3.128640303352964E-4 23 0.0 0.0 0.0 9.385920910058892E-4 3.128640303352964E-4 24 0.0 0.0 0.0 0.001355744131452951 3.128640303352964E-4 25 0.0 0.0 0.0 0.00229433622245884 3.128640303352964E-4 26 0.0 0.0 0.0 0.0028157762730176674 3.128640303352964E-4 27 0.0 0.0 0.0 0.003650080353911791 3.128640303352964E-4 28 0.0 0.0 0.0 0.0057358405561471005 3.128640303352964E-4 29 0.0 0.0 0.0 0.008551616829164768 3.128640303352964E-4 30 0.0 0.0 0.0 0.013974593354976571 3.128640303352964E-4 31 0.0 0.0 0.0 0.023777666305482524 3.128640303352964E-4 32 0.0 0.0 0.0 0.033372163235764946 3.128640303352964E-4 33 0.0 0.0 0.0 0.041923780064929715 3.128640303352964E-4 34 0.0 0.0 0.0 0.05245686908621803 4.1715204044706183E-4 35 0.0 0.0 0.0 0.065805734380524 4.1715204044706183E-4 36 0.0 0.0 0.0 0.08322183206918883 4.1715204044706183E-4 37 0.0 0.0 0.0 0.10950241061735373 4.1715204044706183E-4 38 0.0 0.0 0.0 0.14548177410591281 4.1715204044706183E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTATAC 100 6.002665E-11 26.398561 3 CAGTACG 45 0.001398447 24.443113 9 GTATCAA 1275 0.0 24.340776 1 GATTGCG 55 1.5938724E-4 23.998693 10 GGTATCA 590 0.0 23.875557 1 GATCGAA 65 1.8136487E-5 23.691015 11 GTGATCG 75 2.0645057E-6 23.46539 9 TAGGACG 475 0.0 22.6935 4 TGTAGGA 710 0.0 21.07257 2 GTAGGAC 715 0.0 20.921936 3 CGCAATA 285 0.0 20.843142 36 TACACTA 65 4.9329526E-4 20.306585 5 ACCGCGC 55 0.004484362 19.99891 8 GGACGTG 525 0.0 19.694164 6 GTCCTAG 170 5.456968E-12 19.420834 1 GTCCTAC 400 0.0 19.258993 1 CGTCTTA 80 8.989864E-5 19.248951 15 AGGACGT 515 0.0 19.222252 5 CTGTAGG 745 0.0 18.90816 1 AATACGA 315 0.0 18.858082 39 >>END_MODULE