##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062075_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2031537 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.975529365204768 32.0 32.0 32.0 32.0 32.0 2 31.367610336410316 32.0 32.0 32.0 32.0 32.0 3 31.51062471419423 32.0 32.0 32.0 32.0 32.0 4 31.61347836637974 32.0 32.0 32.0 32.0 32.0 5 31.541548098804007 32.0 32.0 32.0 32.0 32.0 6 35.21352896846083 36.0 36.0 36.0 36.0 36.0 7 35.2251738462061 36.0 36.0 36.0 36.0 36.0 8 35.15645149460728 36.0 36.0 36.0 36.0 36.0 9 35.28043693026511 36.0 36.0 36.0 36.0 36.0 10 35.12966930949325 36.0 36.0 36.0 36.0 36.0 11 35.280641701332534 36.0 36.0 36.0 36.0 36.0 12 35.18792618593705 36.0 36.0 36.0 36.0 36.0 13 35.237057459450654 36.0 36.0 36.0 36.0 36.0 14 35.19739044870953 36.0 36.0 36.0 36.0 36.0 15 35.15830329450067 36.0 36.0 36.0 36.0 36.0 16 35.174416710106684 36.0 36.0 36.0 36.0 36.0 17 35.15830723240581 36.0 36.0 36.0 36.0 36.0 18 35.157164255438126 36.0 36.0 36.0 36.0 36.0 19 35.150977806458855 36.0 36.0 36.0 36.0 36.0 20 35.15393960336435 36.0 36.0 36.0 36.0 36.0 21 35.14081161209469 36.0 36.0 36.0 36.0 36.0 22 35.127214025636746 36.0 36.0 36.0 36.0 36.0 23 35.09216814658064 36.0 36.0 36.0 36.0 36.0 24 35.07673401961175 36.0 36.0 36.0 36.0 36.0 25 35.06232079455112 36.0 36.0 36.0 36.0 36.0 26 35.01284298538496 36.0 36.0 36.0 36.0 36.0 27 35.005846804660706 36.0 36.0 36.0 36.0 36.0 28 34.98477212081296 36.0 36.0 36.0 36.0 36.0 29 34.965350372648885 36.0 36.0 36.0 36.0 36.0 30 34.9389811753367 36.0 36.0 36.0 36.0 36.0 31 34.948785574665884 36.0 36.0 36.0 36.0 36.0 32 34.91940240320506 36.0 36.0 36.0 32.0 36.0 33 34.89644146279393 36.0 36.0 36.0 32.0 36.0 34 34.88322634537299 36.0 36.0 36.0 32.0 36.0 35 34.87098536723673 36.0 36.0 36.0 32.0 36.0 36 34.85134506533723 36.0 36.0 36.0 32.0 36.0 37 34.84155247972348 36.0 36.0 36.0 32.0 36.0 38 34.820798242906726 36.0 36.0 36.0 32.0 36.0 39 34.80526173040412 36.0 36.0 36.0 32.0 36.0 40 34.793372210301854 36.0 36.0 36.0 32.0 36.0 41 34.76539683992957 36.0 36.0 36.0 32.0 36.0 42 34.73425834725137 36.0 36.0 36.0 32.0 36.0 43 34.728810255486366 36.0 36.0 36.0 32.0 36.0 44 34.68036122403875 36.0 36.0 36.0 32.0 36.0 45 34.65923534742414 36.0 36.0 36.0 32.0 36.0 46 34.63858054271224 36.0 36.0 36.0 32.0 36.0 47 34.612927059659754 36.0 36.0 36.0 32.0 36.0 48 34.5853897812346 36.0 36.0 36.0 32.0 36.0 49 34.57914229472562 36.0 36.0 36.0 32.0 36.0 50 34.13494118000312 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 6.0 20 18.0 21 43.0 22 123.0 23 306.0 24 880.0 25 2086.0 26 4518.0 27 8650.0 28 15120.0 29 25019.0 30 37871.0 31 58099.0 32 90012.0 33 161225.0 34 368618.0 35 1258941.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.279837790036964 17.87923669143671 12.741685163775735 26.09924035475059 2 16.553256950170447 19.316538882803943 36.41537344474938 27.714830722276236 3 18.96575741988201 22.15679276999904 27.958071113714507 30.919378696404443 4 13.242042847361382 15.383869454506613 33.96005093680302 37.41403676132899 5 15.65559261563664 35.67271266667192 32.03221601783085 16.6394786998606 6 36.305914643811036 33.62818441630807 15.707933020072517 14.357967919808381 7 31.897179327770058 29.510661139816797 19.006889857285394 19.585269675127748 8 29.011876229672414 32.28023905053169 18.244068407319187 20.46381631247671 9 27.117989975077982 14.504092221800539 18.33877502600248 40.039142777119 10 17.38098660324011 25.846108560222415 29.352617920627544 27.42028691590993 11 37.77031872911987 21.152162131430536 21.158659674916088 19.918859464533504 12 25.14708082948075 23.04950539887061 27.316129273613658 24.487284498034985 13 29.731971408839712 19.02052485384219 24.58882117332837 26.65868256398973 14 24.22353124752343 18.938714874501425 24.14487159229687 32.69288228567828 15 25.88148776025246 26.569439788692012 21.337735911282934 26.211336539772596 16 26.591389920680314 25.37220788707602 22.5800703510563 25.456331841187364 17 24.611710246970645 25.604357685830976 24.370415109348244 25.413516957850142 18 25.52862736797545 24.514615795445316 25.12981563202209 24.826941204557144 19 26.248549743371647 24.42653025763252 24.717935238196496 24.606984760799335 20 26.442533460003055 23.75962944184925 24.232081239263017 25.565755858884682 21 27.11893857652535 23.603470477510612 24.143702105205126 25.13388884075891 22 26.56126863552079 23.51062274524166 24.525568571972848 25.402540047264704 23 25.114236167000648 23.637226395581276 25.06629217188759 26.182245265530486 24 25.268197932387636 24.242021499151868 24.690109189071052 25.799671379389444 25 25.718361454133404 23.71731101586831 24.68475776667177 25.87956976332651 26 25.162943933307307 24.736663603289546 24.917611235292465 25.182781228110677 27 25.74525038246998 23.985790034318928 24.594345548088832 25.67461403512226 28 25.54094078927614 23.957584197347092 24.890536926527943 25.61093808684883 29 25.238626155228218 24.203837018988196 25.09090461599045 25.466632209793133 30 25.235969447402013 24.38177850695516 25.04803070420913 25.3342213414337 31 25.96429879381431 23.822659594157695 24.3561988808424 25.85684273118559 32 25.733539418760337 24.071138851697253 24.145122863668583 26.05019886587383 33 25.328409629575297 23.890234615927973 24.58773743768868 26.19361831680805 34 25.937876568296197 24.061483511723335 24.580507840496498 25.42013207948397 35 26.131178899066764 23.970197845861076 24.876706287031798 25.021916968040358 36 25.312043600700363 24.409471299175447 24.541244098650917 25.737241001473276 37 26.206862263947546 23.92730054388731 24.499443018833002 25.366394173332147 38 25.471699506334367 23.802224621062773 24.747518750581456 25.978557122021407 39 26.185663936362918 23.845347326140033 24.13709931479877 25.831889422698275 40 26.098761676504047 24.04770378289935 24.540581835329604 25.312952705267 41 25.117806633203827 24.513772288256945 24.960780346806583 25.40764073173265 42 26.479113132685512 24.197113349282766 24.253280956178436 25.070492561853285 43 25.925247695095422 23.64276575750371 24.522589763166717 25.90939678423415 44 25.398272474834616 24.267411483656343 24.355131602329553 25.979184439179487 45 25.407180715039217 24.490553387720908 24.396877333594556 25.70538856364532 46 25.602949190070458 24.215286149508263 24.330965757359316 25.850798903061968 47 25.550256804557804 24.202143631374952 24.787620612491423 25.459978951575824 48 26.20577488132878 24.582700165841885 23.75634582734624 25.45517912548309 49 25.646335724398117 24.53643994541835 24.029364218302966 25.78786011188057 50 25.673160557795004 24.60119350292567 24.17850070317534 25.54714523610398 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 54.0 1 56.0 2 58.0 3 164.0 4 270.0 5 284.5 6 299.0 7 241.5 8 184.0 9 257.5 10 331.0 11 562.0 12 793.0 13 1560.0 14 2327.0 15 3083.0 16 3839.0 17 3664.0 18 3489.0 19 3301.5 20 3114.0 21 3550.0 22 3986.0 23 4797.0 24 5608.0 25 7199.5 26 8791.0 27 11052.0 28 13313.0 29 15841.0 30 18369.0 31 21255.5 32 24142.0 33 28142.5 34 32143.0 35 37673.0 36 43203.0 37 52500.0 38 61797.0 39 69692.5 40 77588.0 41 85937.5 42 94287.0 43 99572.5 44 104858.0 45 115723.0 46 126588.0 47 135425.0 48 144262.0 49 151099.5 50 157937.0 51 156727.5 52 155518.0 53 156326.0 54 157134.0 55 157736.0 56 158338.0 57 153530.0 58 148722.0 59 139047.0 60 129372.0 61 114513.0 62 99654.0 63 87549.0 64 75444.0 65 65019.5 66 54595.0 67 48650.0 68 42705.0 69 37051.0 70 31397.0 71 24339.0 72 17281.0 73 14651.0 74 12021.0 75 9118.0 76 6215.0 77 5444.5 78 4674.0 79 3819.5 80 2965.0 81 2255.5 82 1546.0 83 1373.5 84 1201.0 85 942.0 86 683.0 87 455.5 88 228.0 89 156.5 90 85.0 91 58.5 92 32.0 93 28.5 94 25.0 95 25.5 96 26.0 97 30.0 98 34.0 99 23.0 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.02899282661354433 2 0.005513067199859023 3 9.844762856891111E-5 4 0.0 5 4.922381428445556E-5 6 1.4767144285336668E-4 7 0.0 8 0.0 9 0.0 10 4.922381428445556E-5 11 0.0 12 4.922381428445556E-5 13 0.0 14 0.0 15 0.0 16 5.414619571290112E-4 17 0.0 18 9.844762856891111E-5 19 0.0 20 3.4456669999118896E-4 21 4.922381428445556E-5 22 0.0 23 0.0 24 7.383572142668335E-4 25 1.9689525713782223E-4 26 4.922381428445556E-4 27 2.461190714222778E-4 28 0.001476714428533667 29 5.906857714134667E-4 30 0.0011813715428269334 31 4.4301432856010006E-4 32 8.368048428357446E-4 33 1.9689525713782223E-4 34 0.0016243858713870336 35 2.9534288570673336E-4 36 4.922381428445556E-4 37 0.0024611907142227784 38 0.0 39 8.368048428357446E-4 40 0.0 41 0.001476714428533667 42 0.005759186271281301 43 0.0053161719427212 44 0.0037410098856186227 45 0.0033472193713429783 46 0.0031503241142051557 47 0.0015259382428181225 48 0.004134800399894267 49 0.004184024214178722 50 0.0018705049428093114 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2031537.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.963447357482 #Duplication Level Percentage of deduplicated Percentage of total 1 73.27606686290353 33.680206418163976 2 14.402889161304937 13.240128755225752 3 4.737412161496093 6.53243383486862 4 2.1765307722354925 4.001634302863429 5 1.2003633917337977 2.7586419782902474 6 0.7839533166638851 2.161991820072234 7 0.5363861874839687 1.7257910804189904 8 0.3877687991419037 1.4258552628986323 9 0.305189725664211 1.2624814700650202 >10 1.9573280410761122 16.693797729922373 >50 0.14374580814646495 4.526019994083868 >100 0.08063327397084637 7.240281239074356 >500 0.008503370239674365 2.6235046566620728 >1k 0.0032291279391168477 2.127231457390419 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2210 0.10878462956864679 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2098 0.10327156236878776 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 9.844762856891113E-5 13 0.0 0.0 0.0 0.0 9.844762856891113E-5 14 0.0 0.0 0.0 0.0 1.9689525713782226E-4 15 0.0 0.0 0.0 0.0 1.9689525713782226E-4 16 0.0 0.0 0.0 4.9223814284455564E-5 1.9689525713782226E-4 17 0.0 0.0 0.0 4.9223814284455564E-5 1.9689525713782226E-4 18 0.0 0.0 0.0 1.4767144285336668E-4 1.9689525713782226E-4 19 0.0 0.0 0.0 3.4456669999118896E-4 1.9689525713782226E-4 20 0.0 0.0 0.0 5.906857714134667E-4 2.461190714222778E-4 21 0.0 0.0 0.0 7.87581028551289E-4 2.461190714222778E-4 22 0.0 0.0 0.0 0.0010337000999735668 2.461190714222778E-4 23 0.0 0.0 0.0 0.0015259382428181225 2.461190714222778E-4 24 0.0 0.0 0.0 0.0020674001999471336 2.461190714222778E-4 25 0.0 0.0 0.0 0.0027565335999295117 2.461190714222778E-4 26 0.0 0.0 0.0 0.003150324114205156 2.461190714222778E-4 27 0.0 0.0 0.0 0.003593338442765256 2.461190714222778E-4 28 0.0 0.0 0.0 0.004134800399894267 2.461190714222778E-4 29 0.0 0.0 0.0 0.0055622910141434785 2.461190714222778E-4 30 0.0 0.0 0.0 0.008121929356935167 2.461190714222778E-4 31 0.0 0.0 0.0 0.011666043985415969 2.461190714222778E-4 32 0.0 0.0 0.0 0.01767134932811955 2.9534288570673336E-4 33 0.0 0.0 0.0 0.02382432611367649 2.9534288570673336E-4 34 0.0 0.0 0.0 0.030912555370638094 3.4456669999118896E-4 35 0.0 0.0 0.0 0.03923137998471108 3.4456669999118896E-4 36 0.0 0.0 0.0 0.04843623325590427 3.4456669999118896E-4 37 0.0 0.0 0.0 0.06625525402687718 3.4456669999118896E-4 38 0.0 0.0 0.0 0.08500952726925476 3.4456669999118896E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2885 0.0 29.519653 1 GGTATCA 1025 0.0 28.125067 1 TCAACGC 4385 0.0 19.314684 4 GGCGTTA 660 0.0 19.002127 42 TAGATCG 70 8.129224E-4 18.856005 5 ATCAACG 4545 0.0 18.68314 3 CAACGCA 4535 0.0 18.675829 5 AACGCAG 4575 0.0 18.560627 6 TATCAAC 4570 0.0 18.534166 2 CAACGCG 145 6.31735E-9 18.206245 21 AGCGCTA 170 1.2732926E-10 18.11789 14 ATTACTC 100 2.485652E-5 17.598936 3 TCGATCG 190 3.274181E-11 17.369509 41 CGTTATT 725 0.0 17.297634 44 AATCGGT 80 0.001989127 16.499815 19 ATACCGT 670 0.0 16.41692 6 TACCGTC 660 0.0 16.332346 7 CCTATTC 515 0.0 16.23203 3 GGACCGT 150 1.8406536E-7 16.132359 6 CCGCCTA 165 3.1113814E-8 16.001003 41 >>END_MODULE