##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062072_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 841209 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.25899746674132 32.0 32.0 32.0 32.0 32.0 2 31.445939118578142 32.0 32.0 32.0 32.0 32.0 3 31.57479294681821 32.0 32.0 32.0 32.0 32.0 4 31.65641356666417 32.0 32.0 32.0 32.0 32.0 5 31.627685866413696 32.0 32.0 32.0 32.0 32.0 6 35.28131891123371 36.0 36.0 36.0 36.0 36.0 7 35.27685509784132 36.0 36.0 36.0 36.0 36.0 8 35.23385745991781 36.0 36.0 36.0 36.0 36.0 9 35.31323131350235 36.0 36.0 36.0 36.0 36.0 10 35.192330324568566 36.0 36.0 36.0 36.0 36.0 11 35.312373025015184 36.0 36.0 36.0 36.0 36.0 12 35.23587479449221 36.0 36.0 36.0 36.0 36.0 13 35.27696089794569 36.0 36.0 36.0 36.0 36.0 14 35.23657378844021 36.0 36.0 36.0 36.0 36.0 15 35.206002313337116 36.0 36.0 36.0 36.0 36.0 16 35.22075370092331 36.0 36.0 36.0 36.0 36.0 17 35.2029626406755 36.0 36.0 36.0 36.0 36.0 18 35.19516552961274 36.0 36.0 36.0 36.0 36.0 19 35.18617727580185 36.0 36.0 36.0 36.0 36.0 20 35.18028813291346 36.0 36.0 36.0 36.0 36.0 21 35.16072343496087 36.0 36.0 36.0 36.0 36.0 22 35.153028557706826 36.0 36.0 36.0 36.0 36.0 23 35.114784791888816 36.0 36.0 36.0 36.0 36.0 24 35.10097015129415 36.0 36.0 36.0 36.0 36.0 25 35.07938693000194 36.0 36.0 36.0 36.0 36.0 26 35.043215181958345 36.0 36.0 36.0 36.0 36.0 27 35.03377757489518 36.0 36.0 36.0 36.0 36.0 28 35.006384857984166 36.0 36.0 36.0 36.0 36.0 29 34.98280094483059 36.0 36.0 36.0 36.0 36.0 30 34.966306827435275 36.0 36.0 36.0 36.0 36.0 31 34.96556147164379 36.0 36.0 36.0 36.0 36.0 32 34.941144234072624 36.0 36.0 36.0 36.0 36.0 33 34.91843644088449 36.0 36.0 36.0 32.0 36.0 34 34.89681161280966 36.0 36.0 36.0 32.0 36.0 35 34.88564791865042 36.0 36.0 36.0 32.0 36.0 36 34.845270319266675 36.0 36.0 36.0 32.0 36.0 37 34.84370947053586 36.0 36.0 36.0 32.0 36.0 38 34.81948837922562 36.0 36.0 36.0 32.0 36.0 39 34.78744045772216 36.0 36.0 36.0 32.0 36.0 40 34.78448756492144 36.0 36.0 36.0 32.0 36.0 41 34.7598028551763 36.0 36.0 36.0 32.0 36.0 42 34.720111173323154 36.0 36.0 36.0 32.0 36.0 43 34.72410304692413 36.0 36.0 36.0 32.0 36.0 44 34.6710662867373 36.0 36.0 36.0 32.0 36.0 45 34.64597501928772 36.0 36.0 36.0 32.0 36.0 46 34.60629284755632 36.0 36.0 36.0 32.0 36.0 47 34.586256209812305 36.0 36.0 36.0 32.0 36.0 48 34.558209672031566 36.0 36.0 36.0 32.0 36.0 49 34.53052689640743 36.0 36.0 36.0 32.0 36.0 50 34.11267116733178 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 4.0 20 9.0 21 21.0 22 56.0 23 167.0 24 373.0 25 957.0 26 1985.0 27 3830.0 28 6826.0 29 10581.0 30 16139.0 31 23583.0 32 35996.0 33 60942.0 34 139520.0 35 540217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.2384531227703 17.72915378395091 12.130880464253437 25.90151262902535 2 16.119218807954578 19.6681788353448 37.68557353039078 26.527028826309834 3 19.112537104422575 22.73138478400679 28.500357224797224 29.655720886773413 4 12.746891676147069 15.898783774305791 34.877539351100616 36.47678519844652 5 14.681012685313638 36.548229988029135 33.0072550341235 15.76350229253372 6 35.197757507961775 34.79987684363064 16.152148044417128 13.850217603990455 7 30.992892372763485 29.954743708162894 19.474232919524162 19.578130999549458 8 28.17147700512001 33.762834206481386 18.493739367981085 19.571949420417518 9 26.894029902200284 14.345543140884132 18.273698926188377 40.48672803072721 10 16.86358562497548 26.624180197786757 30.310065631727667 26.20216854551009 11 37.788468739635455 20.941882457272808 21.47504365740262 19.794605145689122 12 24.69802391557865 23.282680047407958 28.491730354763206 23.52756568225019 13 29.93346481076641 19.049487107246833 24.85803171387848 26.159016368108283 14 23.652742659671972 19.49349091605059 24.757462176462685 32.09630424781475 15 25.498300660121327 26.84136760305703 21.974562801872068 25.685768934949575 16 25.970245065114923 25.649276930118102 23.516384234520718 24.864093770246253 17 24.196246117195606 25.883579467171653 24.954083943467083 24.966090472165657 18 24.96056262013987 24.986834393912556 26.032474765426343 24.02012822052123 19 26.023378256770908 24.637872395564003 24.746406659938256 24.59234268772683 20 25.979900333805674 24.365555249117936 24.73478616465844 24.91975825241795 21 27.072701314417703 24.099361751954625 24.19672162328268 24.63121531034499 22 26.020644096770244 24.1307451537014 25.021130301744275 24.82748044778408 23 24.878864680316877 24.103313330353494 25.154658538672958 25.863163450656675 24 25.023300047551118 24.669281978126488 25.118758915834523 25.188659058487872 25 25.285126354305604 24.178381989667216 25.234365898483844 25.302125757543337 26 24.455185662455243 25.471348210422207 25.705536350278884 24.367929776843667 27 25.151003260790745 24.380681568270354 25.37472940667398 25.09358576426492 28 24.771872429255488 24.80206753241813 25.353544239392484 25.072515798933896 29 24.537715628688915 24.573973226438802 25.316481277408663 25.57182986746362 30 24.81781934812018 25.022170761223872 25.300820971994703 24.859188918661243 31 25.221230521966138 24.61257911279547 24.775797547325023 25.39039281791337 32 25.18577516776529 24.681974072907316 24.727028488893907 25.405222270433487 33 24.970994094207377 24.344514079751974 25.17023138153703 25.514260444503616 34 25.297224556852775 24.716981356373463 25.321713411451984 24.664080675321774 35 25.650642469689387 24.402792653888994 25.43868512744188 24.50787974897974 36 24.526543407270744 25.23088847334842 24.886502370997864 25.356065748382978 37 25.499888253279885 24.939014821894748 24.85532366129807 24.7057732635273 38 24.998306009564804 24.605062475556018 25.21109498352966 25.185536531349523 39 25.67151013848058 24.18244866565779 24.87669415514247 25.269347040719165 40 26.007955226293618 24.61959467812955 24.83678234158496 24.535667753991877 41 24.594182379283 24.898032936164043 25.924539023279756 24.5832456612732 42 26.00685003976637 25.1409061026222 24.83989428921624 24.012349568395187 43 25.226736410378344 24.32193063274586 25.37367373019883 25.077659226676968 44 24.759471640062817 25.01768372348482 24.807143392112643 25.415701244339722 45 24.974470477886502 25.123546243801886 24.8673594211961 25.034623857115513 46 24.868370841749 24.89297886681828 24.542879186484846 25.69577110494788 47 25.0641046215955 24.79508513402829 25.224351315913047 24.916458928463165 48 25.784466289496745 24.90474656344622 24.170180592194033 25.14060655486301 49 25.15668465726717 25.379585819919637 24.550987897952876 24.912741624860317 50 25.32944047722358 25.47780014003821 24.19284854118942 24.99991084154879 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 439.0 1 245.0 2 51.0 3 127.0 4 203.0 5 180.0 6 157.0 7 122.0 8 87.0 9 126.5 10 166.0 11 285.5 12 405.0 13 775.0 14 1145.0 15 1450.5 16 1756.0 17 1803.0 18 1850.0 19 1851.5 20 1853.0 21 2006.0 22 2159.0 23 2582.5 24 3006.0 25 3915.5 26 4825.0 27 6723.0 28 8621.0 29 9964.0 30 11307.0 31 12415.5 32 13524.0 33 15769.5 34 18015.0 35 20799.0 36 23583.0 37 27119.0 38 30655.0 39 32990.5 40 35326.0 41 38121.0 42 40916.0 43 42148.5 44 43381.0 45 47560.5 46 51740.0 47 55005.0 48 58270.0 49 60892.0 50 63514.0 51 61670.0 52 59826.0 53 60219.5 54 60613.0 55 61318.0 56 62023.0 57 60254.5 58 58486.0 59 53792.0 60 49098.0 61 44129.5 62 39161.0 63 33855.0 64 28549.0 65 24234.0 66 19919.0 67 17477.5 68 15036.0 69 13455.5 70 11875.0 71 9305.0 72 6735.0 73 5988.0 74 5241.0 75 3882.0 76 2523.0 77 2241.5 78 1960.0 79 1706.5 80 1453.0 81 1116.5 82 780.0 83 648.5 84 517.0 85 395.0 86 273.0 87 188.5 88 104.0 89 69.5 90 35.0 91 25.5 92 16.0 93 13.0 94 10.0 95 11.5 96 13.0 97 9.0 98 5.0 99 4.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034355314790973465 2 0.003922925218346451 3 2.377530435361486E-4 4 0.0 5 0.0 6 2.377530435361486E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 4.755060870722972E-4 17 0.0 18 2.377530435361486E-4 19 0.0 20 1.188765217680743E-4 21 0.0 22 0.0 23 1.188765217680743E-4 24 0.0010698886959126686 25 3.566295653042229E-4 26 5.943826088403714E-4 27 2.377530435361486E-4 28 0.0015453947829849658 29 7.132591306084458E-4 30 0.001307641739448817 31 5.943826088403714E-4 32 4.755060870722972E-4 33 1.188765217680743E-4 34 0.0011887652176807428 35 2.377530435361486E-4 36 2.377530435361486E-4 37 0.00249640695712956 38 0.0 39 9.510121741445944E-4 40 1.188765217680743E-4 41 7.132591306084458E-4 42 0.005468320001331417 43 0.0040418017401145255 44 0.004755060870722971 45 0.0030907895659699315 46 0.0023775304353614857 47 7.132591306084458E-4 48 0.0038040486965783774 49 0.0034474191312741545 50 0.0011887652176807428 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 841209.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.57745071068598 #Duplication Level Percentage of deduplicated Percentage of total 1 72.65892433738263 39.655388617149626 2 15.827479706205642 17.276469870796422 3 5.428353206411596 8.887970386893693 4 2.3647176291616727 5.162410394010457 5 1.1838479912561726 3.2305702695864182 6 0.649786872703201 2.127822661044585 7 0.4034063805823866 1.5411824296828005 8 0.28972817402524464 1.2650100109887872 9 0.1781177326733799 0.8749090598112482 >10 0.8709404929573776 8.466043920250137 >50 0.07552438552904335 2.844345478991116 >100 0.06370053645126947 6.681428711445871 >500 0.005253652473958299 1.864468060562833 >1k 2.189021864149291E-4 0.12198012878602155 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1021 0.12137292872520386 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 901 0.10710774611303493 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 894 0.1062756104606584 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 1.1887652176807428E-4 0.0 9 0.0 0.0 0.0 1.1887652176807428E-4 0.0 10 0.0 0.0 0.0 2.3775304353614856E-4 1.1887652176807428E-4 11 0.0 0.0 0.0 2.3775304353614856E-4 2.3775304353614856E-4 12 0.0 0.0 0.0 2.3775304353614856E-4 0.001307641739448817 13 0.0 0.0 0.0 2.3775304353614856E-4 0.0015453947829849658 14 0.0 0.0 0.0 2.3775304353614856E-4 0.0015453947829849658 15 0.0 0.0 0.0 2.3775304353614856E-4 0.00166427130475304 16 0.0 0.0 0.0 3.5662956530422283E-4 0.00166427130475304 17 0.0 0.0 0.0 3.5662956530422283E-4 0.0017831478265211143 18 0.0 0.0 0.0 7.132591306084457E-4 0.0017831478265211143 19 0.0 0.0 0.0 0.0010698886959126686 0.0017831478265211143 20 0.0 0.0 0.0 0.0011887652176807428 0.0017831478265211143 21 0.0 0.0 0.0 0.0011887652176807428 0.0017831478265211143 22 0.0 0.0 0.0 0.0011887652176807428 0.0017831478265211143 23 0.0 0.0 0.0 0.00166427130475304 0.0017831478265211143 24 0.0 0.0 0.0 0.0017831478265211143 0.0017831478265211143 25 0.0 0.0 0.0 0.002139777391825337 0.0017831478265211143 26 0.0 0.0 0.0 0.00249640695712956 0.002139777391825337 27 0.0 0.0 0.0 0.0027341600006657086 0.002258653913593411 28 0.0 0.0 0.0 0.0035662956530422285 0.002258653913593411 29 0.0 0.0 0.0 0.004398431305418749 0.002258653913593411 30 0.0 0.0 0.0 0.0072514678278525315 0.002258653913593411 31 0.0 0.0 0.0 0.01224428174211165 0.002258653913593411 32 0.0 0.0 0.0 0.019852379135268404 0.002258653913593411 33 0.0 0.0 0.0 0.023775304353614857 0.002258653913593411 34 0.0 0.0 0.0 0.029600253920250497 0.0023775304353614857 35 0.0 0.0 0.0 0.03542520348688614 0.0023775304353614857 36 0.0 0.0 0.0 0.043984313054187485 0.0023775304353614857 37 0.0 0.0 0.0 0.06003264349287751 0.0023775304353614857 38 0.0 0.0 0.0 0.07786412175808866 0.0023775304353614857 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 185 0.0 26.161173 4 AGGACGT 225 0.0 22.488037 5 GTATCAA 1370 0.0 22.325632 1 GTGTTAT 60 2.8678903E-4 22.0044 1 TATACTA 60 2.8725062E-4 21.999168 5 GTCCTAG 145 1.2732926E-11 21.245628 1 GGTATCA 690 0.0 21.047686 1 CGCAATA 305 0.0 20.918484 36 TCTATAG 65 4.9317075E-4 20.306923 3 ATACGAA 315 0.0 20.25561 40 CGAATGC 310 0.0 19.87258 43 GATATAC 370 0.0 19.625546 1 TACGAAT 315 0.0 19.55714 41 CTAGCGG 315 0.0 19.555979 29 TGTAGGA 305 0.0 19.474672 2 GGACGTG 250 0.0 19.359268 6 TAGCGGC 330 0.0 19.333752 30 GCGCAAT 330 0.0 19.333752 35 TATGGCG 190 1.8189894E-12 18.525616 16 GGACCGT 60 0.007411891 18.33264 6 >>END_MODULE