##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062071_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1877007 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.306684524884563 32.0 32.0 32.0 32.0 32.0 2 31.504990657999677 32.0 32.0 32.0 32.0 32.0 3 31.60196632191569 32.0 32.0 32.0 32.0 32.0 4 31.66748712178484 32.0 32.0 32.0 32.0 32.0 5 31.64157832123162 32.0 32.0 32.0 32.0 32.0 6 35.28921842060259 36.0 36.0 36.0 36.0 36.0 7 35.29591045744635 36.0 36.0 36.0 36.0 36.0 8 35.24861761304034 36.0 36.0 36.0 36.0 36.0 9 35.3292054851154 36.0 36.0 36.0 36.0 36.0 10 35.22543655937351 36.0 36.0 36.0 36.0 36.0 11 35.32841113538735 36.0 36.0 36.0 36.0 36.0 12 35.26832558429457 36.0 36.0 36.0 36.0 36.0 13 35.29002875322255 36.0 36.0 36.0 36.0 36.0 14 35.25393618670575 36.0 36.0 36.0 36.0 36.0 15 35.23537259051245 36.0 36.0 36.0 36.0 36.0 16 35.249875466633846 36.0 36.0 36.0 36.0 36.0 17 35.23419678243075 36.0 36.0 36.0 36.0 36.0 18 35.22810996442741 36.0 36.0 36.0 36.0 36.0 19 35.22362303390451 36.0 36.0 36.0 36.0 36.0 20 35.215054072787154 36.0 36.0 36.0 36.0 36.0 21 35.21176958849914 36.0 36.0 36.0 36.0 36.0 22 35.18973504094551 36.0 36.0 36.0 36.0 36.0 23 35.162664816913306 36.0 36.0 36.0 36.0 36.0 24 35.14511506883032 36.0 36.0 36.0 36.0 36.0 25 35.129113530210596 36.0 36.0 36.0 36.0 36.0 26 35.092310257766755 36.0 36.0 36.0 36.0 36.0 27 35.08536622399384 36.0 36.0 36.0 36.0 36.0 28 35.06713773576764 36.0 36.0 36.0 36.0 36.0 29 35.048558689445485 36.0 36.0 36.0 36.0 36.0 30 35.02197754190581 36.0 36.0 36.0 36.0 36.0 31 35.015466644503725 36.0 36.0 36.0 36.0 36.0 32 34.99798189351451 36.0 36.0 36.0 36.0 36.0 33 34.96397882373374 36.0 36.0 36.0 36.0 36.0 34 34.966895168744706 36.0 36.0 36.0 36.0 36.0 35 34.939349187296585 36.0 36.0 36.0 36.0 36.0 36 34.919498435541264 36.0 36.0 36.0 36.0 36.0 37 34.90740524675721 36.0 36.0 36.0 36.0 36.0 38 34.89511014077198 36.0 36.0 36.0 32.0 36.0 39 34.86815126422011 36.0 36.0 36.0 32.0 36.0 40 34.85879594482066 36.0 36.0 36.0 32.0 36.0 41 34.824846151346264 36.0 36.0 36.0 32.0 36.0 42 34.80196983815191 36.0 36.0 36.0 32.0 36.0 43 34.783523982595696 36.0 36.0 36.0 32.0 36.0 44 34.75518045484114 36.0 36.0 36.0 32.0 36.0 45 34.719528483378056 36.0 36.0 36.0 32.0 36.0 46 34.69392975092794 36.0 36.0 36.0 32.0 36.0 47 34.65175729232762 36.0 36.0 36.0 32.0 36.0 48 34.615795785524504 36.0 36.0 36.0 32.0 36.0 49 34.596285469366926 36.0 36.0 36.0 32.0 36.0 50 34.1984680930865 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 3.0 19 6.0 20 18.0 21 47.0 22 138.0 23 330.0 24 953.0 25 2112.0 26 4520.0 27 8237.0 28 14294.0 29 22750.0 30 33922.0 31 50205.0 32 75702.0 33 126576.0 34 290271.0 35 1246923.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.65732290447532 18.61722765480736 12.905978259710968 25.81947118100635 2 16.48206389960536 19.30851350062576 37.512980090179994 26.696442509588884 3 18.946330371517984 23.09805743414232 28.179618348835007 29.775993845504694 4 13.537083239433844 15.56621792033807 34.47302007930711 36.42367876092097 5 14.806034080889502 36.319881939579275 32.60540062493174 16.26868335459948 6 33.76750063798512 34.904525991700595 16.230874431207624 15.097098939106651 7 30.52711044764351 30.309743117633552 19.098916519757253 20.064229914965686 8 27.70831435364919 33.54377474351454 18.097055578375574 20.6508553244607 9 26.92227572939259 14.948372595307315 18.300571068728033 39.82878060657205 10 16.901384438835038 26.170347883810706 29.614982583966164 27.31328509338809 11 37.00130047463862 22.06512815349117 21.25863142758658 19.67493994428364 12 23.64935239985786 23.810300121416702 27.75636958199943 24.78397789672601 13 29.4173117095461 19.88596739383497 24.687068295429906 26.00965260118902 14 22.973222795652866 18.97046734508715 24.40427766119146 33.65203219806852 15 26.4964382125373 26.672569681413016 21.034604559279746 25.79638754676994 16 25.329823456610562 26.87208076339286 22.579780701964687 25.21831507803189 17 23.811845134301578 26.613432981336775 24.393728952529212 25.180992931832435 18 24.078026388834132 26.121653313841296 25.010415523445317 24.78990477387925 19 26.224011124104624 24.793807155548333 25.058324298550083 23.92385742179696 20 26.160999124136126 24.408685330452144 24.825839476101276 24.604476069310454 21 26.01647196840502 24.109872792163266 25.291754372786034 24.581900866645675 22 25.701236063584204 24.14583429896639 24.814238838747006 25.3386907987024 23 24.98565533922392 24.328384847136793 25.290342860035004 25.39561695360428 24 25.163586031708146 24.6663015438515 24.583456313658967 25.586656110781387 25 25.02041818793044 23.736669573783313 24.99639052255111 26.24652171573514 26 25.10162504168891 24.475625440197593 25.027890280117504 25.39485923799599 27 25.140929750095765 24.688558704613055 24.978702705755303 25.191808839535877 28 25.007898330242373 24.5098107117874 24.676994255130186 25.805296702840042 29 25.174240995461904 24.951225307645505 24.874187399240704 25.000346297651888 30 25.31261571083413 24.696468005871118 24.308611949482813 25.68230433381194 31 25.156633258675033 24.558336831831287 24.866009304228673 25.419020605265008 32 25.083351536236208 24.222611734745524 24.780100053809555 25.91393667520871 33 24.78797316786388 24.62654561553711 24.908004941920712 25.677476274678302 34 25.187414923401093 24.078029392882737 25.102331664877447 25.632224018838723 35 25.15010639306724 24.205248582580094 24.87338852063024 25.771256503722423 36 25.358736964585017 24.147976400664465 24.66539726649199 25.827889368258532 37 25.455001702210634 24.344169409117136 24.919085057787253 25.281743830884974 38 24.892994481637245 24.202266801491312 24.71696947159466 26.187769245276787 39 25.235496600676292 24.901664419275317 24.74439142222845 25.118447557819934 40 25.43291040780392 24.441170907909143 24.94921430683456 25.17670437745238 41 25.126172956978394 25.264373168274474 24.58706426842594 25.022389606321195 42 25.430641549483752 24.790493305748974 24.63774216011538 25.141122984651894 43 25.169385555462615 24.1451070923758 24.697444924720195 25.988062427441395 44 24.86758955719689 24.50502922593236 24.793479135332237 25.83390208153851 45 25.292014747250875 24.3663157446083 24.94240687068451 25.39926263745631 46 25.164628259799375 24.621568113477355 24.441436027269685 25.77236759945358 47 25.277505622036145 24.497639570610165 24.879847457816748 25.345007349536946 48 25.17761764588356 25.100683298480224 23.89280338852112 25.82889566711509 49 25.561034345888377 25.059045731471784 24.054695554188076 25.32522436845176 50 24.949599889183688 25.723129708361302 23.755873797270084 25.571396605184926 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 104.0 1 90.5 2 77.0 3 210.0 4 343.0 5 377.5 6 412.0 7 354.0 8 296.0 9 406.0 10 516.0 11 905.5 12 1295.0 13 2568.0 14 3841.0 15 5076.5 16 6312.0 17 5794.5 18 5277.0 19 4650.0 20 4023.0 21 4056.5 22 4090.0 23 4931.5 24 5773.0 25 7164.5 26 8556.0 27 10680.0 28 12804.0 29 15706.0 30 18608.0 31 23143.5 32 27679.0 33 35034.0 34 42389.0 35 47086.5 36 51784.0 37 57311.5 38 62839.0 39 68867.5 40 74896.0 41 85836.5 42 96777.0 43 102619.5 44 108462.0 45 108476.0 46 108490.0 47 115216.0 48 121942.0 49 126290.0 50 130638.0 51 137055.5 52 143473.0 53 140279.0 54 137085.0 55 136614.5 56 136144.0 57 132551.5 58 128959.0 59 120012.0 60 111065.0 61 102339.5 62 93614.0 63 83242.0 64 72870.0 65 62891.0 66 52912.0 67 44820.5 68 36729.0 69 31942.0 70 27155.0 71 23199.5 72 19244.0 73 14054.0 74 8864.0 75 6597.5 76 4331.0 77 3543.0 78 2755.0 79 2336.0 80 1917.0 81 1426.5 82 936.0 83 659.0 84 382.0 85 273.0 86 164.0 87 111.5 88 59.0 89 46.0 90 33.0 91 29.0 92 25.0 93 23.5 94 22.0 95 20.0 96 18.0 97 19.0 98 20.0 99 14.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03596150680311794 2 0.005007972799249017 3 2.663815318749477E-4 4 0.0 5 1.065526127499791E-4 6 2.131052254999582E-4 7 0.0 8 0.0 9 0.0 10 5.327630637498955E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.589735147498118E-4 17 0.0 18 5.327630637498955E-5 19 1.065526127499791E-4 20 1.5982891912496864E-4 21 0.0 22 0.0 23 1.065526127499791E-4 24 6.925919828748641E-4 25 2.131052254999582E-4 26 4.794867573749059E-4 27 4.262104509999164E-4 28 0.0014917365784997071 29 4.794867573749059E-4 30 0.00117207874024977 31 5.86039370124885E-4 32 9.056972083748223E-4 33 2.131052254999582E-4 34 0.00117207874024977 35 2.663815318749477E-4 36 2.663815318749477E-4 37 0.0019179470294996236 38 5.327630637498955E-5 39 8.524209019998328E-4 40 1.065526127499791E-4 41 0.001065526127499791 42 0.005221078024748976 43 0.004048999284499206 44 0.004155551897249184 45 0.0025039863996245085 46 0.002717091625124467 47 9.589735147498118E-4 48 0.004368657122749142 49 0.003835894058999247 50 0.0014384602721247176 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1877007.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.424404399966186 #Duplication Level Percentage of deduplicated Percentage of total 1 69.50147768963521 35.04570617417393 2 16.473753441779703 16.61358411067269 3 6.273266183736835 9.489771328721362 4 2.870345017783516 5.789417517765765 5 1.5194758330782325 3.8309331941556146 6 0.878411668537771 2.657603112239857 7 0.5656162703277964 1.996460448514658 8 0.3609764134139749 1.456161651906852 9 0.25896485712014966 1.17523338127253 >10 1.1470803327071433 10.172434512391556 >50 0.08554550512332075 2.97097208678068 >100 0.05955734712794266 5.774180351984239 >500 0.0034027320790740037 1.163371025468121 >1k 0.0021267075494212527 1.864171103952167 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ATCTTATACCACACGCTAGGATTACATATATTTCAGAAACAGCACATGAA 3967 0.2113471073895835 No Hit GTATATGGATGATAGTAATGAAGACCAGAGGCTTCCTCATCACCTTGAAC 3964 0.21118727847045854 No Hit CCTCACAACCGTCCCAACGATCATCTTCCCGCGAGGAAGGAGTATCTAAA 3212 0.1711234960764664 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2466 0.1313793715207242 No Hit GTTGTGAGGAGTCCAGACAGGATCGCCAACAAAGAGTCGCATAGCCTTGA 2134 0.1136916378042277 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0655261274997909E-4 2 0.0 0.0 0.0 0.0 1.0655261274997909E-4 3 0.0 0.0 0.0 0.0 1.0655261274997909E-4 4 0.0 0.0 0.0 0.0 1.0655261274997909E-4 5 0.0 0.0 0.0 0.0 1.5982891912496864E-4 6 5.327630637498954E-5 0.0 0.0 0.0 2.1310522549995817E-4 7 5.327630637498954E-5 0.0 0.0 0.0 2.663815318749477E-4 8 5.327630637498954E-5 0.0 0.0 0.0 3.196578382499373E-4 9 5.327630637498954E-5 0.0 0.0 0.0 3.196578382499373E-4 10 5.327630637498954E-5 0.0 0.0 0.0 3.196578382499373E-4 11 5.327630637498954E-5 0.0 0.0 0.0 3.196578382499373E-4 12 5.327630637498954E-5 0.0 0.0 0.0 4.2621045099991634E-4 13 5.327630637498954E-5 0.0 0.0 0.0 4.794867573749059E-4 14 5.327630637498954E-5 0.0 0.0 0.0 4.794867573749059E-4 15 5.327630637498954E-5 0.0 0.0 0.0 4.794867573749059E-4 16 5.327630637498954E-5 0.0 0.0 5.327630637498954E-5 4.794867573749059E-4 17 5.327630637498954E-5 0.0 0.0 5.327630637498954E-5 4.794867573749059E-4 18 5.327630637498954E-5 0.0 0.0 5.327630637498954E-5 4.794867573749059E-4 19 5.327630637498954E-5 0.0 0.0 5.327630637498954E-5 5.327630637498955E-4 20 5.327630637498954E-5 0.0 0.0 1.0655261274997909E-4 6.393156764998746E-4 21 5.327630637498954E-5 0.0 0.0 2.1310522549995817E-4 6.393156764998746E-4 22 5.327630637498954E-5 0.0 0.0 4.2621045099991634E-4 6.393156764998746E-4 23 5.327630637498954E-5 0.0 0.0 4.794867573749059E-4 6.393156764998746E-4 24 1.5982891912496864E-4 0.0 0.0 7.458682892498536E-4 6.925919828748641E-4 25 1.5982891912496864E-4 0.0 0.0 0.0015450128848746969 6.925919828748641E-4 26 1.5982891912496864E-4 0.0 0.0 0.0018113944167496446 6.925919828748641E-4 27 1.5982891912496864E-4 0.0 5.327630637498954E-5 0.002131052254999582 6.925919828748641E-4 28 1.5982891912496864E-4 0.0 5.327630637498954E-5 0.002930196850624425 6.925919828748641E-4 29 1.5982891912496864E-4 0.0 5.327630637498954E-5 0.004262104509999164 7.458682892498536E-4 30 1.5982891912496864E-4 0.0 5.327630637498954E-5 0.006286604152248766 7.458682892498536E-4 31 2.1310522549995817E-4 0.0 5.327630637498954E-5 0.010388879743122961 7.991445956248432E-4 32 2.1310522549995817E-4 0.0 5.327630637498954E-5 0.015503405155121958 9.056972083748223E-4 33 2.1310522549995817E-4 0.0 5.327630637498954E-5 0.019605680745996154 9.589735147498118E-4 34 2.1310522549995817E-4 0.0 5.327630637498954E-5 0.02578573228549494 0.0010122498211248014 35 2.1310522549995817E-4 0.0 5.327630637498954E-5 0.03265837580786859 0.0010122498211248014 36 2.1310522549995817E-4 0.0 5.327630637498954E-5 0.0417686241979918 0.0010122498211248014 37 2.1310522549995817E-4 0.0 5.327630637498954E-5 0.05684581890211384 0.0010122498211248014 38 2.1310522549995817E-4 0.0 1.5982891912496864E-4 0.07613184180986006 0.0010122498211248014 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1245 0.0 31.648344 1 TTATACC 675 0.0 27.050508 4 GTATCAA 3445 0.0 26.772696 1 ATCTTAT 695 0.0 25.971458 1 CACGCTA 650 0.0 25.384031 12 ACGCTAG 680 0.0 24.264147 13 GTATATG 940 0.0 23.88579 1 TATACCA 885 0.0 23.117496 5 GATAGTA 950 0.0 22.231068 11 CGCTAGG 755 0.0 21.853804 14 TATATGG 1035 0.0 21.46925 2 ACACGCT 765 0.0 21.280556 11 GTATCTA 785 0.0 21.020864 42 GTATTAG 170 0.0 20.717546 1 TATCTAA 790 0.0 20.609867 43 CTTATAC 980 0.0 20.427559 3 TGATAGT 1025 0.0 20.389776 10 TATGGAT 1060 0.0 20.338614 4 AGGATTA 800 0.0 20.074003 18 ATGATAG 1060 0.0 19.92354 9 >>END_MODULE