##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062070_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1800245 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.311077658874208 32.0 32.0 32.0 32.0 32.0 2 31.50651716849651 32.0 32.0 32.0 32.0 32.0 3 31.61136900810723 32.0 32.0 32.0 32.0 32.0 4 31.680156312057527 32.0 32.0 32.0 32.0 32.0 5 31.659475238092593 32.0 32.0 32.0 32.0 32.0 6 35.3180183808315 36.0 36.0 36.0 36.0 36.0 7 35.322908270818694 36.0 36.0 36.0 36.0 36.0 8 35.276549025271564 36.0 36.0 36.0 36.0 36.0 9 35.3553466333749 36.0 36.0 36.0 36.0 36.0 10 35.24819399581724 36.0 36.0 36.0 36.0 36.0 11 35.35230704709637 36.0 36.0 36.0 36.0 36.0 12 35.28592108296371 36.0 36.0 36.0 36.0 36.0 13 35.30919402636863 36.0 36.0 36.0 36.0 36.0 14 35.27900202472441 36.0 36.0 36.0 36.0 36.0 15 35.25766770633997 36.0 36.0 36.0 36.0 36.0 16 35.268977833572656 36.0 36.0 36.0 36.0 36.0 17 35.25200625470422 36.0 36.0 36.0 36.0 36.0 18 35.25349271904658 36.0 36.0 36.0 36.0 36.0 19 35.23319770364589 36.0 36.0 36.0 36.0 36.0 20 35.228585553632975 36.0 36.0 36.0 36.0 36.0 21 35.21249329952312 36.0 36.0 36.0 36.0 36.0 22 35.19535563215007 36.0 36.0 36.0 36.0 36.0 23 35.16826709697847 36.0 36.0 36.0 36.0 36.0 24 35.157253040558366 36.0 36.0 36.0 36.0 36.0 25 35.13122936044816 36.0 36.0 36.0 36.0 36.0 26 35.096641290491014 36.0 36.0 36.0 36.0 36.0 27 35.07396048871126 36.0 36.0 36.0 36.0 36.0 28 35.05590072462359 36.0 36.0 36.0 36.0 36.0 29 35.02407783385039 36.0 36.0 36.0 36.0 36.0 30 34.99714649950423 36.0 36.0 36.0 36.0 36.0 31 34.99409858102647 36.0 36.0 36.0 36.0 36.0 32 34.96980522095603 36.0 36.0 36.0 36.0 36.0 33 34.95770797863624 36.0 36.0 36.0 36.0 36.0 34 34.95115942552264 36.0 36.0 36.0 36.0 36.0 35 34.93184205483143 36.0 36.0 36.0 36.0 36.0 36 34.898370499570895 36.0 36.0 36.0 36.0 36.0 37 34.87013489830551 36.0 36.0 36.0 32.0 36.0 38 34.8553963488303 36.0 36.0 36.0 32.0 36.0 39 34.79846965274171 36.0 36.0 36.0 32.0 36.0 40 34.81366758413438 36.0 36.0 36.0 32.0 36.0 41 34.79050073739963 36.0 36.0 36.0 32.0 36.0 42 34.75907501478965 36.0 36.0 36.0 32.0 36.0 43 34.76845484920108 36.0 36.0 36.0 32.0 36.0 44 34.70720207527309 36.0 36.0 36.0 32.0 36.0 45 34.69151920988532 36.0 36.0 36.0 32.0 36.0 46 34.63723604287194 36.0 36.0 36.0 32.0 36.0 47 34.62050887518088 36.0 36.0 36.0 32.0 36.0 48 34.59493291190921 36.0 36.0 36.0 32.0 36.0 49 34.569309732841916 36.0 36.0 36.0 32.0 36.0 50 34.192480467936306 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 19.0 21 39.0 22 130.0 23 308.0 24 810.0 25 2002.0 26 4138.0 27 8058.0 28 13653.0 29 21813.0 30 32474.0 31 47970.0 32 72455.0 33 124503.0 34 285422.0 35 1186446.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.79329965304712 17.720546234083177 12.216197654234003 26.2699564586357 2 15.703800155874772 19.35852475581378 38.4538511234816 26.48382396482985 3 19.130028557255883 22.739985657491793 28.373225170157585 29.75676061509474 4 12.57495507555916 15.481115070448745 35.26908837408242 36.67484147990968 5 14.561740207582858 36.64334576682618 33.26741637943724 15.527497646153718 6 35.322767358202555 34.80561523882319 16.1708635051693 13.700753897804965 7 30.994336881924404 29.89848603940019 19.6670453188316 19.440131759843798 8 27.829045491030385 34.49797110948787 18.56719502067774 19.105788378803997 9 27.058039322425557 14.199900569089207 18.491149815719528 40.25091029276571 10 16.617358535842918 26.73626463968218 30.89431210435919 25.75206472011572 11 37.4426814128077 20.762062941432973 22.409616468869515 19.385639176889814 12 24.945382434057585 23.02092215226261 28.923174345714052 23.11052106796575 13 30.00547147749334 19.427244625037147 25.08941838471986 25.477865512749652 14 23.10135564881447 19.95861674383209 24.748520340287016 32.19150726706643 15 24.885057311643692 28.51150815583435 21.546178436823876 25.057256095698083 16 25.264534907942576 25.83923765508392 24.58223509708455 24.31399233988896 17 23.634949687403658 26.591769453602147 25.47542140097598 24.297859458018216 18 24.47366769227009 24.935828036357353 27.084818088244848 23.505686183127704 19 25.910862132654167 24.572933128546392 25.042646973050893 24.473557765748552 20 26.00483936012905 24.66890488924242 25.0723515446291 24.25390420599943 21 26.151621669062635 24.17811141156421 24.472016015606773 25.19825090376638 22 25.88114395540607 24.882835391849444 25.037314365544688 24.198706287199798 23 24.200539371030054 24.84667364719802 25.85087029820941 25.101916683562514 24 25.191863733421616 24.705094220979916 25.704074354695717 24.398967690902747 25 24.870683908812158 24.803081811314048 25.723347998044705 24.60288628182909 26 23.989745811669554 25.797282584544284 26.13223792383238 24.080733679953784 27 24.593581515332975 25.187836274981418 25.587061266343675 24.631520943341936 28 24.223665623647737 25.266703069564162 25.403075063478248 25.106556243309857 29 24.375415223337384 24.803914597863834 25.34328832441969 25.477381854379093 30 24.02130615459905 25.167770136165856 25.931949844214436 24.878973865020658 31 25.40325223664871 24.468709137347393 25.085849759865088 25.042188866138808 32 24.758031724729424 25.161701021421635 25.045160745591133 25.035106508257805 33 24.195678027910677 25.026343665827333 25.930943767035895 24.847034539226094 34 24.935175021886067 25.077323367210447 25.958598669504816 24.028902941398663 35 25.000833222237034 25.136092965382396 25.93343109807581 23.92964271430476 36 24.011145186833527 25.439844376218936 25.68881131894154 24.860199118005998 37 24.98622393657678 25.034995644986402 25.02060854649199 24.958171871944828 38 24.63925743440476 25.32677496674064 25.20995753355793 24.82401006529667 39 25.640124050333373 24.335629142162947 25.12108127985371 24.90316552764997 40 25.912654062449313 24.672599936453057 25.440162555742447 23.974583445355186 41 24.89163890634035 24.75348996878734 26.106705195055525 24.248165929816786 42 25.390810963649486 25.686283550359494 25.3860891795039 23.536816306487122 43 24.650591272892104 24.99544491007586 25.777864929362774 24.57609888766926 44 24.189303291893033 25.431679054316792 25.342188003421878 25.036829650368297 45 24.36922741919984 25.67029568167767 25.26456591525558 24.69591098386691 46 24.53547189389706 24.793663420015623 25.371594710406654 25.299269975680673 47 25.29433820772403 24.801899762529683 25.48553653015595 24.418225499590328 48 25.161511088298656 25.441537707770195 24.551740764565437 24.845210439365708 49 25.071589546231987 25.312563708446817 24.798285517163993 24.817561228157203 50 24.696384162149158 26.051052677479795 24.521960939196845 24.730602221174202 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 217.0 1 152.0 2 87.0 3 216.0 4 345.0 5 352.0 6 359.0 7 289.5 8 220.0 9 294.5 10 369.0 11 643.0 12 917.0 13 1711.5 14 2506.0 15 3077.0 16 3648.0 17 3563.0 18 3478.0 19 3196.5 20 2915.0 21 3426.5 22 3938.0 23 4861.0 24 5784.0 25 7605.5 26 9427.0 27 13264.0 28 17101.0 29 20936.0 30 24771.0 31 29424.0 32 34077.0 33 40786.5 34 47496.0 35 55812.0 36 64128.0 37 70207.0 38 76286.0 39 79212.5 40 82139.0 41 85220.5 42 88302.0 43 90930.5 44 93559.0 45 101709.5 46 109860.0 47 117296.5 48 124733.0 49 130420.0 50 136107.0 51 133700.5 52 131294.0 53 130682.0 54 130070.0 55 130712.0 56 131354.0 57 126165.5 58 120977.0 59 111216.0 60 101455.0 61 89204.0 62 76953.0 63 66211.5 64 55470.0 65 46887.0 66 38304.0 67 32854.0 68 27404.0 69 24105.0 70 20806.0 71 16390.5 72 11975.0 73 10455.0 74 8935.0 75 6574.5 76 4214.0 77 3655.5 78 3097.0 79 2654.5 80 2212.0 81 1741.5 82 1271.0 83 1080.0 84 889.0 85 693.0 86 497.0 87 331.5 88 166.0 89 104.5 90 43.0 91 35.5 92 28.0 93 26.5 94 25.0 95 21.0 96 17.0 97 16.0 98 15.0 99 10.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03205119303205953 2 0.004554935578212966 3 1.1109598971251135E-4 4 0.0 5 0.0 6 5.5547994856255673E-5 7 0.0 8 0.0 9 0.0 10 5.5547994856255673E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.554799485625568E-4 17 0.0 18 2.221919794250227E-4 19 0.0 20 3.888359639937897E-4 21 5.5547994856255673E-5 22 0.0 23 0.0 24 4.99931953706301E-4 25 2.777399742812784E-4 26 2.777399742812784E-4 27 3.888359639937897E-4 28 0.001222055886837625 29 4.99931953706301E-4 30 7.776719279875794E-4 31 3.888359639937897E-4 32 4.99931953706301E-4 33 1.1109598971251135E-4 34 7.221239331313238E-4 35 2.777399742812784E-4 36 3.3328796913753404E-4 37 0.0011665078919813692 38 0.0 39 4.443839588500454E-4 40 5.5547994856255673E-5 41 7.776719279875794E-4 42 0.004332743598787943 43 0.003388427686231596 44 0.003610619665656619 45 0.0017775358354001815 46 0.001721987840543926 47 0.0011109598971251137 48 0.003277331696519085 49 0.0028884957325252952 50 0.0014442478662626476 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1800245.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.86036160776796 #Duplication Level Percentage of deduplicated Percentage of total 1 76.88825430446568 42.181174345330085 2 13.616052493414621 14.939631269181536 3 4.064874299054394 6.690014218087392 4 1.7473972952622314 3.8345138996208687 5 0.9527050621224284 2.613287210679373 6 0.5832652425661157 1.9198885272251762 7 0.38473308645059295 1.4774617371606529 8 0.28187174401315496 1.2370868642859107 9 0.20567209573452622 1.0154920990161223 >10 1.1300825480398524 11.130695985543088 >50 0.0792143869191886 2.9827027584460843 >100 0.05813985505722799 6.438780555727115 >500 0.0060068108829459035 2.2906649038761344 >1k 0.001730776017120006 1.2486056258205156 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6664398456876702E-4 2 0.0 0.0 0.0 0.0 1.6664398456876702E-4 3 0.0 0.0 0.0 0.0 1.6664398456876702E-4 4 0.0 0.0 0.0 0.0 1.6664398456876702E-4 5 0.0 0.0 0.0 0.0 1.6664398456876702E-4 6 0.0 0.0 0.0 0.0 1.6664398456876702E-4 7 0.0 0.0 0.0 0.0 1.6664398456876702E-4 8 0.0 0.0 0.0 0.0 1.6664398456876702E-4 9 0.0 0.0 0.0 0.0 1.6664398456876702E-4 10 0.0 0.0 0.0 0.0 2.221919794250227E-4 11 0.0 0.0 0.0 0.0 2.221919794250227E-4 12 0.0 0.0 0.0 0.0 3.3328796913753404E-4 13 0.0 0.0 0.0 0.0 3.888359639937897E-4 14 0.0 0.0 0.0 0.0 4.443839588500454E-4 15 0.0 0.0 0.0 5.5547994856255673E-5 6.110279434188125E-4 16 0.0 0.0 0.0 1.6664398456876702E-4 6.110279434188125E-4 17 0.0 0.0 0.0 2.221919794250227E-4 6.110279434188125E-4 18 0.0 0.0 0.0 3.3328796913753404E-4 6.110279434188125E-4 19 0.0 0.0 0.0 3.3328796913753404E-4 6.110279434188125E-4 20 0.0 0.0 0.0 3.3328796913753404E-4 7.221239331313238E-4 21 0.0 0.0 0.0 7.221239331313238E-4 7.221239331313238E-4 22 0.0 0.0 0.0 7.776719279875794E-4 7.221239331313238E-4 23 0.0 0.0 0.0 9.443159125563465E-4 9.443159125563465E-4 24 0.0 0.0 0.0 0.001222055886837625 9.443159125563465E-4 25 0.0 0.0 0.0 0.0013886998714063919 9.443159125563465E-4 26 0.0 0.0 0.0 0.0015553438559751589 0.001055411902268858 27 0.0 0.0 0.0 0.00205527580968146 0.001055411902268858 28 0.0 0.0 0.0 0.003055139717094062 0.001055411902268858 29 0.0 0.0 0.0 0.004388291593644199 0.001055411902268858 30 0.0 0.0 0.0 0.007387883315882005 0.001055411902268858 31 0.0 0.0 0.0 0.01322042277578885 0.001055411902268858 32 0.0 0.0 0.0 0.019219606220264463 0.0011109598971251135 33 0.0 0.0 0.0 0.02632974956186519 0.0011109598971251135 34 0.0 0.0 0.0 0.03355098889317843 0.0013331518765501362 35 0.0 0.0 0.0 0.04138325616791048 0.0013331518765501362 36 0.0 0.0 0.0 0.05193737519059906 0.0013331518765501362 37 0.0 0.0 0.0 0.06960163755488837 0.0013331518765501362 38 0.0 0.0 0.0 0.09120980755397182 0.0013331518765501362 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 955 0.0 28.80752 1 GTATCAA 2160 0.0 26.186571 1 TGTAGGA 1700 0.0 23.68343 2 GTAGGAC 1690 0.0 22.780201 3 TAGGACG 1335 0.0 22.24635 4 GTCCTAC 1510 0.0 21.717438 1 CTGTAGG 1700 0.0 21.102695 1 AGGACGT 1485 0.0 20.591812 5 TCCTACA 1630 0.0 20.381294 2 GGACGTG 1435 0.0 20.236166 6 GATATAC 600 0.0 20.17487 1 GTACGAT 55 0.004485433 19.999243 3 GTCCTAA 860 0.0 19.961603 1 TTAGGAC 910 0.0 19.339926 3 TAGGACC 1365 0.0 18.534098 4 CCTACAG 1730 0.0 18.438608 3 GACGTGA 845 0.0 17.70347 7 TACGACG 425 0.0 17.599333 5 ACTGTTC 745 0.0 17.42216 8 ACGACGG 435 0.0 17.194752 6 >>END_MODULE