##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062068_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1397570 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27547886689039 32.0 32.0 32.0 32.0 32.0 2 31.45226929599233 32.0 32.0 32.0 32.0 32.0 3 31.576062737465744 32.0 32.0 32.0 32.0 32.0 4 31.656985338838126 32.0 32.0 32.0 32.0 32.0 5 31.626002990905643 32.0 32.0 32.0 32.0 32.0 6 35.2813919875212 36.0 36.0 36.0 36.0 36.0 7 35.285728085176416 36.0 36.0 36.0 36.0 36.0 8 35.234849059438886 36.0 36.0 36.0 36.0 36.0 9 35.32072812095279 36.0 36.0 36.0 36.0 36.0 10 35.203611268129684 36.0 36.0 36.0 36.0 36.0 11 35.32234521347768 36.0 36.0 36.0 36.0 36.0 12 35.24648353928605 36.0 36.0 36.0 36.0 36.0 13 35.28091258398506 36.0 36.0 36.0 36.0 36.0 14 35.24852923288279 36.0 36.0 36.0 36.0 36.0 15 35.227493435033665 36.0 36.0 36.0 36.0 36.0 16 35.23345020285209 36.0 36.0 36.0 36.0 36.0 17 35.21414741300973 36.0 36.0 36.0 36.0 36.0 18 35.21059195603798 36.0 36.0 36.0 36.0 36.0 19 35.200151691865166 36.0 36.0 36.0 36.0 36.0 20 35.2069806879083 36.0 36.0 36.0 36.0 36.0 21 35.19662056283406 36.0 36.0 36.0 36.0 36.0 22 35.182166188455675 36.0 36.0 36.0 36.0 36.0 23 35.15012128193936 36.0 36.0 36.0 36.0 36.0 24 35.133860915732306 36.0 36.0 36.0 36.0 36.0 25 35.11095544409225 36.0 36.0 36.0 36.0 36.0 26 35.07678828251894 36.0 36.0 36.0 36.0 36.0 27 35.06665712629779 36.0 36.0 36.0 36.0 36.0 28 35.04426969668782 36.0 36.0 36.0 36.0 36.0 29 35.033103887461806 36.0 36.0 36.0 36.0 36.0 30 35.01209170202566 36.0 36.0 36.0 36.0 36.0 31 35.01268988315433 36.0 36.0 36.0 36.0 36.0 32 34.989356525970074 36.0 36.0 36.0 36.0 36.0 33 34.9718740385097 36.0 36.0 36.0 36.0 36.0 34 34.96053220947788 36.0 36.0 36.0 36.0 36.0 35 34.940242706984264 36.0 36.0 36.0 36.0 36.0 36 34.92596220582869 36.0 36.0 36.0 36.0 36.0 37 34.91566361613372 36.0 36.0 36.0 36.0 36.0 38 34.901526220511315 36.0 36.0 36.0 32.0 36.0 39 34.89077183969318 36.0 36.0 36.0 32.0 36.0 40 34.87591748534957 36.0 36.0 36.0 32.0 36.0 41 34.8502715427492 36.0 36.0 36.0 32.0 36.0 42 34.82316735476577 36.0 36.0 36.0 32.0 36.0 43 34.81754187625665 36.0 36.0 36.0 32.0 36.0 44 34.77569924941148 36.0 36.0 36.0 32.0 36.0 45 34.75862103508232 36.0 36.0 36.0 32.0 36.0 46 34.7460127220819 36.0 36.0 36.0 32.0 36.0 47 34.719678441866954 36.0 36.0 36.0 32.0 36.0 48 34.6978298045894 36.0 36.0 36.0 32.0 36.0 49 34.6843485478366 36.0 36.0 36.0 32.0 36.0 50 34.27231265696888 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 12.0 21 22.0 22 94.0 23 258.0 24 576.0 25 1394.0 26 3101.0 27 5819.0 28 10106.0 29 16262.0 30 24861.0 31 36884.0 32 56799.0 33 97026.0 34 225510.0 35 918844.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.10435091315638 17.69947292023946 12.027782628985664 26.168393537618496 2 16.501358506065515 19.20255658175974 37.02828855427334 27.267796357901407 3 19.051350026653502 22.415057618071433 28.2608680097169 30.272724345558167 4 13.261088890001933 15.486451483646615 34.1318145066079 37.12064511974356 5 15.17391985655091 36.11349421745903 32.71373363318734 15.998852292802718 6 35.99526892091757 33.783353499331334 15.991505237315993 14.229872342435105 7 31.623389168342193 29.541990741072006 19.403822348791117 19.430797741794688 8 28.68099630072197 33.19747848050545 18.33732836280115 19.784196855971437 9 26.879154532509997 14.692001116223159 18.41260187325143 40.016242478015414 10 17.36642887297237 26.281044956603246 30.102964431119727 26.24956173930465 11 37.54237712601158 21.197220890545733 21.18877766408838 20.07162431935431 12 24.67239565817812 23.323268244166663 27.92983535708408 24.074500740571132 13 29.836716586646823 18.959837432114313 24.867806263729186 26.33563971750968 14 23.684037293301945 19.13092009702555 24.477128158160237 32.707914451512266 15 25.55685940596893 26.619561095329754 21.616734761049536 26.206844737651778 16 26.333681559289047 25.487635593462894 22.894902544434586 25.283780302813476 17 24.621593193900843 25.844787738717915 24.552687879676867 24.98093118770437 18 25.345600357191923 24.796432087740993 25.189686655676148 24.668280899390943 19 25.957125582260637 24.871312349291983 24.732499982111808 24.439062086335568 20 26.141557739037353 24.166764455867494 24.530039411433037 25.161638393662116 21 26.669218715341632 23.951429982040256 24.354987585594998 25.024363717023117 22 26.329414626816543 23.815909042123113 24.64835392860465 25.20632240245569 23 24.996887454653436 23.987850340233404 25.210973332283892 25.804288872829268 24 25.07606135281878 24.50363348588536 24.92594214471549 25.494363016580373 25 25.506898774799346 24.032837066129925 24.87937966480319 25.580884494267536 26 25.054326710137577 24.85111583520743 25.116434822616224 24.978122632038772 27 25.578935919929247 24.454193153229475 24.73804419690261 25.228826729938664 28 25.35319102654371 24.214836885278746 25.088583973026967 25.343388115150578 29 25.079602908493502 24.63296798281579 25.090264331743423 25.197164776947282 30 25.18482370551852 24.62405584638238 25.05853108444218 25.13258936365692 31 25.51575455578421 24.363034537237652 24.499486248930282 25.62172465804786 32 25.524377451590695 24.35534165926091 24.4303293878912 25.68995150125719 33 24.99593937177967 24.26423920999852 24.902849022622885 25.836972395598924 34 25.68546399180856 24.275145843783115 24.92349149265468 25.11589867175364 35 25.860441753418616 24.292144848869498 25.00101962911259 24.846393768599288 36 25.05643744655884 24.673414116695824 24.775520279915426 25.49462815682991 37 25.853977212963553 24.416102762765384 24.64443107182646 25.0854889524446 38 25.2418125746832 24.2104509970878 24.971843986347732 25.575892441881265 39 25.762937924579877 24.263608379759553 24.45930687670923 25.514146818951346 40 25.849581774079294 24.40443054730711 24.780440335725583 24.965547342888012 41 25.093288054191866 24.695235171760928 25.045418671062926 25.16605810298429 42 25.94626388912741 24.650804009456913 24.700034919599055 24.70289718181662 43 25.53183572590836 24.066237429500013 24.86093202377358 25.540994820818053 44 25.154488834442922 24.43449501685853 24.75857094608132 25.652445202617223 45 25.386177465611098 24.707987727041154 24.631925721122197 25.273909086225547 46 25.3684320493666 24.42334552615159 24.71571556959924 25.492506854882564 47 25.41166537274025 24.49806984340509 24.98935641173335 25.10090837212131 48 25.92214141171285 24.917567555963902 24.150559424346767 25.009731607976484 49 25.315987417747387 24.927443106522677 24.228635787292383 25.52793368843755 50 25.365156620402402 24.98034061011011 24.411416828437744 25.243085941049735 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 102.0 1 75.0 2 48.0 3 120.0 4 192.0 5 208.5 6 225.0 7 179.5 8 134.0 9 171.0 10 208.0 11 383.5 12 559.0 13 1078.5 14 1598.0 15 1968.0 16 2338.0 17 2318.5 18 2299.0 19 2194.5 20 2090.0 21 2472.0 22 2854.0 23 3480.0 24 4106.0 25 5509.5 26 6913.0 27 8616.0 28 10319.0 29 12038.5 30 13758.0 31 15881.0 32 18004.0 33 21036.5 34 24069.0 35 27916.0 36 31763.0 37 37705.5 38 43648.0 39 49263.0 40 54878.0 41 60471.5 42 66065.0 43 70515.5 44 74966.0 45 81907.0 46 88848.0 47 95946.0 48 103044.0 49 107658.0 50 112272.0 51 110800.0 52 109328.0 53 110122.5 54 110917.0 55 110533.5 56 110150.0 57 105791.0 58 101432.0 59 94273.5 60 87115.0 61 76188.5 62 65262.0 63 56475.0 64 47688.0 65 39865.0 66 32042.0 67 27523.0 68 23004.0 69 20331.0 70 17658.0 71 13782.5 72 9907.0 73 8572.0 74 7237.0 75 5452.0 76 3667.0 77 3161.0 78 2655.0 79 2261.5 80 1868.0 81 1475.5 82 1083.0 83 884.5 84 686.0 85 517.5 86 349.0 87 230.5 88 112.0 89 75.0 90 38.0 91 29.0 92 20.0 93 20.5 94 21.0 95 17.0 96 13.0 97 13.5 98 14.0 99 9.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03134011176542141 2 0.00565266856042989 3 3.577638329386006E-4 4 0.0 5 7.155276658772011E-5 6 2.1465829976316037E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.155276658772012E-4 17 0.0 18 1.4310553317544022E-4 19 0.0 20 4.2931659952632074E-4 21 0.0 22 0.0 23 0.0 24 0.0010017387322280816 25 2.1465829976316037E-4 26 5.008693661140408E-4 27 4.2931659952632074E-4 28 0.0018603719312807229 29 5.724221327017609E-4 30 0.0015741608649298426 31 4.2931659952632074E-4 32 5.724221327017609E-4 33 2.1465829976316037E-4 34 9.301859656403614E-4 35 2.1465829976316037E-4 36 3.577638329386006E-4 37 0.0015026080983421223 38 0.0 39 8.586331990526415E-4 40 0.0 41 0.001216397031991242 42 0.005294904727491288 43 0.0037207438625614458 44 0.004150060462087767 45 0.0018603719312807229 46 0.0018603719312807229 47 0.0010732914988158017 48 0.004436271528438647 49 0.0032914272630351253 50 0.0013595025651666822 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1397570.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.14944935081742 #Duplication Level Percentage of deduplicated Percentage of total 1 78.73148636054376 46.569240647975555 2 12.838009358921418 15.18722368681685 3 3.6062755286731036 6.399276351850262 4 1.5665724319656806 3.706475868757636 5 0.8384277352141426 2.479626942918474 6 0.5098249878788127 1.8093520378991363 7 0.3630799642527711 1.503318596910612 8 0.2621927381779619 1.2406844869607592 9 0.20331094758702567 1.0823157537088925 >10 0.9726321762583643 10.152524587568529 >50 0.05844299304518527 2.400901363194597 >100 0.04512306079525059 5.391432497740083 >500 0.0036487236999173784 1.447001144467903 >1k 9.729929866446342E-4 0.6306260332308659 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4310553317544022E-4 2 0.0 0.0 0.0 0.0 1.4310553317544022E-4 3 0.0 0.0 0.0 0.0 1.4310553317544022E-4 4 0.0 0.0 0.0 0.0 1.4310553317544022E-4 5 0.0 0.0 0.0 0.0 2.1465829976316034E-4 6 7.155276658772011E-5 0.0 0.0 0.0 2.1465829976316034E-4 7 7.155276658772011E-5 0.0 0.0 0.0 2.1465829976316034E-4 8 7.155276658772011E-5 0.0 0.0 7.155276658772011E-5 2.1465829976316034E-4 9 7.155276658772011E-5 0.0 0.0 7.155276658772011E-5 2.1465829976316034E-4 10 7.155276658772011E-5 0.0 0.0 7.155276658772011E-5 2.8621106635088044E-4 11 7.155276658772011E-5 0.0 0.0 7.155276658772011E-5 2.8621106635088044E-4 12 7.155276658772011E-5 0.0 0.0 7.155276658772011E-5 3.5776383293860056E-4 13 7.155276658772011E-5 0.0 0.0 7.155276658772011E-5 5.008693661140408E-4 14 7.155276658772011E-5 0.0 0.0 7.155276658772011E-5 5.008693661140408E-4 15 7.155276658772011E-5 0.0 0.0 1.4310553317544022E-4 7.155276658772011E-4 16 7.155276658772011E-5 0.0 0.0 2.1465829976316034E-4 7.155276658772011E-4 17 7.155276658772011E-5 0.0 0.0 3.5776383293860056E-4 7.870804324649213E-4 18 7.155276658772011E-5 0.0 0.0 5.008693661140408E-4 7.870804324649213E-4 19 7.155276658772011E-5 0.0 0.0 5.724221327017609E-4 7.870804324649213E-4 20 7.155276658772011E-5 0.0 0.0 7.870804324649213E-4 7.870804324649213E-4 21 7.155276658772011E-5 0.0 0.0 8.586331990526414E-4 7.870804324649213E-4 22 7.155276658772011E-5 0.0 0.0 9.301859656403614E-4 8.586331990526414E-4 23 7.155276658772011E-5 0.0 0.0 0.0013595025651666822 9.301859656403614E-4 24 7.155276658772011E-5 0.0 0.0 0.0017172663981052827 0.0010017387322280816 25 7.155276658772011E-5 0.0 0.0 0.0020034774644561632 0.0010732914988158017 26 7.155276658772011E-5 0.0 0.0 0.002361241297394764 0.001216397031991242 27 7.155276658772011E-5 0.0 0.0 0.0027905578969210846 0.0012879497985789621 28 7.155276658772011E-5 0.0 0.0 0.0035060855627982858 0.0012879497985789621 29 7.155276658772011E-5 7.155276658772011E-5 0.0 0.005080246427728128 0.0012879497985789621 30 7.155276658772011E-5 7.155276658772011E-5 0.0 0.0074414877251228915 0.0012879497985789621 31 7.155276658772011E-5 7.155276658772011E-5 0.0 0.01151999542062294 0.0012879497985789621 32 7.155276658772011E-5 7.155276658772011E-5 0.0 0.016385583548587906 0.0012879497985789621 33 7.155276658772011E-5 7.155276658772011E-5 0.0 0.020607196777263394 0.0012879497985789621 34 7.155276658772011E-5 7.155276658772011E-5 0.0 0.02690384023698276 0.0014310553317544022 35 7.155276658772011E-5 7.155276658772011E-5 0.0 0.03549017222750918 0.0014310553317544022 36 7.155276658772011E-5 7.155276658772011E-5 0.0 0.04450582081756191 0.0014310553317544022 37 7.155276658772011E-5 7.155276658772011E-5 0.0 0.05895947966828138 0.0014310553317544022 38 7.155276658772011E-5 7.155276658772011E-5 0.0 0.07849338494672896 0.0014310553317544022 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 760 0.0 28.096312 1 GTATCAA 1545 0.0 24.79202 1 CCGAACG 45 0.0013988265 24.442932 9 CCTATTC 305 0.0 23.08054 3 CTATTCC 295 0.0 22.371498 4 CGCAATA 275 0.0 21.600212 36 CGTCCGA 65 4.9347494E-4 20.306438 10 TACGCGT 100 1.1232023E-6 19.800903 40 ACGCGTA 100 1.1232023E-6 19.800903 41 ATACGAA 300 0.0 19.800901 40 CAATACG 305 0.0 19.476297 38 TACTAGT 80 8.989179E-5 19.250187 2 TACGAAT 310 0.0 19.162163 41 TCTAGCG 315 0.0 18.858002 28 CGAATGC 315 0.0 18.858002 43 CGCGTAT 120 3.1601485E-7 18.334826 42 AATACGA 325 0.0 18.277754 39 GTACTAG 85 1.4242753E-4 18.12885 1 CTAGCGG 330 0.0 17.99953 29 GCGCAAT 345 0.0 17.216944 35 >>END_MODULE