##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062066_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 198497 Sequences flagged as poor quality 0 Sequence length 50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.02638830813564 32.0 32.0 32.0 32.0 32.0 2 31.42695355597314 32.0 32.0 32.0 32.0 32.0 3 31.59672942160335 32.0 32.0 32.0 32.0 32.0 4 31.72800092696615 32.0 32.0 32.0 32.0 32.0 5 31.7110132646841 32.0 32.0 32.0 32.0 32.0 6 35.37795029647803 36.0 36.0 36.0 36.0 36.0 7 35.36523977692358 36.0 36.0 36.0 36.0 36.0 8 35.34828737965813 36.0 36.0 36.0 36.0 36.0 9 35.35545625374691 36.0 36.0 36.0 36.0 36.0 10 35.28415039018222 36.0 36.0 36.0 36.0 36.0 11 35.382030962684574 36.0 36.0 36.0 36.0 36.0 12 35.32891680982584 36.0 36.0 36.0 36.0 36.0 13 35.346725643208714 36.0 36.0 36.0 36.0 36.0 14 35.30142521045658 36.0 36.0 36.0 36.0 36.0 15 35.30203982931732 36.0 36.0 36.0 36.0 36.0 16 35.31102737069074 36.0 36.0 36.0 36.0 36.0 17 35.300886159488556 36.0 36.0 36.0 36.0 36.0 18 35.293843231887635 36.0 36.0 36.0 36.0 36.0 19 35.215731220119196 36.0 36.0 36.0 36.0 36.0 20 35.150979611782546 36.0 36.0 36.0 36.0 36.0 21 35.0931953631541 36.0 36.0 36.0 36.0 36.0 22 35.06620251187675 36.0 36.0 36.0 36.0 36.0 23 35.096374252507594 36.0 36.0 36.0 36.0 36.0 24 35.081084348881845 36.0 36.0 36.0 36.0 36.0 25 35.01642845987597 36.0 36.0 36.0 36.0 36.0 26 35.03760258341436 36.0 36.0 36.0 36.0 36.0 27 34.955676911993635 36.0 36.0 36.0 36.0 36.0 28 34.88770107356786 36.0 36.0 36.0 36.0 36.0 29 34.808788042136655 36.0 36.0 36.0 32.0 36.0 30 34.719245127130385 36.0 36.0 36.0 32.0 36.0 31 34.71237852461246 36.0 36.0 36.0 32.0 36.0 32 34.66175307435377 36.0 36.0 36.0 32.0 36.0 33 34.66132989415457 36.0 36.0 36.0 32.0 36.0 34 34.59361098656403 36.0 36.0 36.0 32.0 36.0 35 34.55588245666181 36.0 36.0 36.0 32.0 36.0 36 34.48013320100556 36.0 36.0 36.0 32.0 36.0 37 34.32424671405613 36.0 36.0 36.0 32.0 36.0 38 34.28230653360001 36.0 36.0 36.0 32.0 36.0 39 33.94087064288125 36.0 36.0 36.0 32.0 36.0 40 34.100656433094706 36.0 36.0 36.0 32.0 36.0 41 34.05311415285873 36.0 36.0 36.0 32.0 36.0 42 34.02911882799236 36.0 36.0 36.0 32.0 36.0 43 34.00417638553731 36.0 36.0 36.0 32.0 36.0 44 33.78435946135206 36.0 36.0 36.0 32.0 36.0 45 33.71045406227802 36.0 36.0 36.0 27.0 36.0 46 33.3940966362212 36.0 36.0 36.0 21.0 36.0 47 33.36219187191746 36.0 36.0 36.0 21.0 36.0 48 33.23159543972957 36.0 36.0 36.0 14.0 36.0 49 33.09974961838214 36.0 36.0 36.0 14.0 36.0 50 32.837997551600274 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 3.0 21 12.0 22 33.0 23 55.0 24 150.0 25 334.0 26 759.0 27 1515.0 28 2609.0 29 4047.0 30 5707.0 31 7696.0 32 11037.0 33 17243.0 34 33203.0 35 114088.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.72562893081761 20.79100145137881 13.449947589098532 24.033422028705047 2 10.995123130869372 20.94232396920721 48.56364112691951 19.49891177300391 3 19.66679597172753 27.70721975646987 30.31330448319118 22.312679788611415 4 10.059094092102146 17.44761885570059 39.07817246608261 33.415114586114655 5 9.60619052177111 42.03841871665567 35.13403225237661 13.221358509196612 6 28.606118007415766 40.082923585361925 18.35855634370466 12.952402063517654 7 25.28753583177579 33.63174254522738 21.439618734791964 19.64110288820486 8 22.94644251550401 42.77948785120178 19.089961057345956 15.184108575948251 9 27.51578109492839 13.557887524748486 20.755477412756868 38.17085396756626 10 16.7272049451629 29.286084928235688 33.10881272764828 20.87789739895313 11 33.47103482672282 21.506118480380056 28.17070283178083 16.85214386111629 12 26.554557499609565 24.196839246940762 33.859957581222886 15.388645672226783 13 31.599973803130528 23.844692866894714 26.57722786742369 17.97810546255107 14 19.099029204471606 25.58829604477649 28.20395270457488 27.108722046177018 15 20.039597575782 38.580431946074754 24.21346418333778 17.166506294805465 16 17.176251290964508 28.040001007582056 35.65530617899695 19.128441522456484 17 16.61737960775226 31.17679360393356 31.940029320342372 20.265797467971808 18 16.81494841205868 26.706835402224733 40.394768660325646 16.08344752539094 19 23.943434913374006 23.163574260568172 30.364186864285102 22.528803961772724 20 24.189282457669385 27.945510511493875 32.148596704232304 15.716610326604433 21 21.69856471382439 25.09609717023431 28.915298467986922 24.29003964795438 22 22.397819614402234 31.292160586809874 30.22363058383754 16.08638921495035 23 18.89852239580447 30.81306014700474 32.85843110979007 17.429986347400718 24 23.114823472513297 26.3415887473803 33.74677575366758 16.796812026438822 25 20.587716690932357 28.63972755255747 33.90026045733689 16.872295299173288 26 15.26924840173907 31.508284759971183 35.85746887862285 17.364997959666898 27 17.10672812917202 30.301518929947857 34.25124058540517 18.34051235547495 28 16.571952522016 31.570038087177316 31.09898635713278 20.759023033673902 29 19.32290485906446 26.823345676213506 30.14483992040102 23.708909544321017 30 16.626195250234264 28.791802271101393 33.031728918758255 21.550273559906095 31 21.764779969268748 26.125595103151213 32.16705710471297 19.942567822867076 32 17.854857804982494 31.055694098088114 32.61643870122673 18.473009395702665 33 16.903530028161633 30.843791090041663 35.603056973153244 16.649621908643457 34 18.32832903433822 30.432855070127356 34.81581492826052 16.4230009672739 35 16.960457840672653 32.059930376781516 33.55214436490224 17.42746741764359 36 16.001833790101564 30.719006932129616 35.30902385942286 17.97013541834596 37 16.741983425275194 30.36298143530064 30.62545656061866 22.26957857880551 38 18.8567081618362 33.46196667959717 29.955112671728035 17.72621248683859 39 21.66732998483604 27.679007743190077 31.68460984296992 18.969052429003966 40 23.39128551061225 28.119820450686912 32.30275520536834 16.186138833332496 41 22.070973722392388 26.278111397710784 35.0898758665162 16.561039013380622 42 19.041453387610336 32.812059167304824 32.69114505662811 15.455342388456733 43 16.100721454193703 33.37682882592399 33.92598041191407 16.59646930796824 44 15.779529939290123 32.762677280399025 31.960601556792707 19.49719122351815 45 16.568762783761727 33.05036928068355 31.196912753030322 19.18395518252441 46 18.51963807105576 28.95179654595651 30.71811458396308 21.810450799024647 47 22.262525504420765 29.40426711000277 29.838031184664597 18.49517620091186 48 17.26349411065322 31.145525809344367 28.95704656060133 22.63393351940109 49 21.044676863551175 29.55988150655946 29.51907381657699 19.876367813312378 50 17.835299807550857 34.98745554021784 27.585720475178093 19.59152417705321 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1217.0 1 652.5 2 88.0 3 223.0 4 358.0 5 336.5 6 315.0 7 207.5 8 100.0 9 192.0 10 284.0 11 465.0 12 646.0 13 1154.0 14 1662.0 15 2113.5 16 2565.0 17 2593.5 18 2622.0 19 2399.0 20 2176.0 21 2246.0 22 2316.0 23 2152.5 24 1989.0 25 2285.5 26 2582.0 27 4080.5 28 5579.0 29 7029.0 30 8479.0 31 10152.0 32 11825.0 33 15086.0 34 18347.0 35 21503.0 36 24659.0 37 23751.0 38 22843.0 39 19737.5 40 16632.0 41 13859.0 42 11086.0 43 9234.5 44 7383.0 45 6740.5 46 6098.0 47 5983.5 48 5869.0 49 5727.5 50 5586.0 51 5701.0 52 5816.0 53 5671.5 54 5527.0 55 5393.5 56 5260.0 57 4862.0 58 4464.0 59 4168.0 60 3872.0 61 3423.0 62 2974.0 63 2524.0 64 2074.0 65 1880.0 66 1686.0 67 1455.0 68 1224.0 69 1067.0 70 910.0 71 719.5 72 529.0 73 457.0 74 385.0 75 297.0 76 209.0 77 170.0 78 131.0 79 93.0 80 55.0 81 46.0 82 37.0 83 30.0 84 23.0 85 16.5 86 10.0 87 5.5 88 1.0 89 1.0 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032746086842622306 2 0.004534073562824627 3 0.0 4 0.0 5 0.0 6 5.037859514249585E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.001007571902849917 17 0.0 18 5.037859514249585E-4 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 5.037859514249585E-4 25 0.0 26 0.0 27 0.001007571902849917 28 0.002518929757124793 29 0.001007571902849917 30 0.0015113578542748757 31 0.001007571902849917 32 0.001007571902849917 33 0.0 34 5.037859514249585E-4 35 0.0 36 5.037859514249585E-4 37 0.001007571902849917 38 0.0 39 0.0 40 0.0 41 5.037859514249585E-4 42 0.004534073562824627 43 0.004534073562824627 44 0.006045431417099503 45 0.0015113578542748757 46 0.002518929757124793 47 0.001007571902849917 48 0.0015113578542748757 49 0.002518929757124793 50 0.0015113578542748757 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 198497.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.46926150017381 #Duplication Level Percentage of deduplicated Percentage of total 1 71.38143489994398 35.31186869322962 2 14.475278782015376 14.321627027108722 3 5.681552013849992 8.431865468999531 4 2.8097153622893223 5.559781759925843 5 1.6273741025510464 4.0252497518854184 6 0.9725546107235602 2.8866935016650124 7 0.6303783288354804 2.1829045275243453 8 0.4134630072814298 1.6362967702282654 9 0.337084372931412 1.5007783492949516 >10 1.5112785783390192 13.122616462717321 >50 0.10081979734202352 3.4665511317551396 >100 0.05091908956667855 4.5637969339587 >500 0.007128672539334997 2.4403391487024995 >1k 0.001018381791333571 0.5496304730046299 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1091 0.5496304730046299 No Hit CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 971 0.4891761588336348 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 778 0.39194547020861775 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 665 0.33501765769759745 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 632 0.31839272130057383 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 630 0.3173851493977239 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 590 0.29723371134072557 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 578 0.29118827992362606 No Hit TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 403 0.20302573842425833 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 372 0.18740837393008458 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 361 0.18186672846441004 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 333 0.1677607218245112 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 295 0.14861685567036279 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 288 0.14509035401038806 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 276 0.13904492259328857 No Hit TATCAACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAA 254 0.12796163166193947 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 241 0.12141241429341502 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 238 0.11990105643914013 No Hit GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 236 0.11889348453629023 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 225 0.11335183907061566 No Hit ACGCAGAGTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAA 216 0.10881776550779106 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGAT 209 0.10529126384781634 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0015113578542748757 0.0 22 0.0 0.0 0.0 0.0015113578542748757 0.0 23 0.0 0.0 0.0 0.004030287611399668 0.0 24 0.0 0.0 0.0 0.005037859514249586 0.0 25 0.0 0.0 0.0 0.007556789271374378 0.0 26 0.0 0.0 0.0 0.009571933077074213 0.0 27 0.0 0.0 0.0 0.013098434737048923 0.0 28 0.0 0.0 0.0 0.016624936397023633 0.0 29 0.0 0.0 0.0 0.023174153765548093 0.0 30 0.0 0.0 0.0 0.03728016040544693 0.0 31 0.0 0.0 0.0 0.06700353153951949 0.0 32 0.0 0.0 0.0 0.09571933077074213 0.0 33 0.0 0.0 0.0 0.11536698287631551 0.0 34 0.0 0.0 0.0 0.13299949117618906 0.0 35 0.0 0.0 0.0 0.15869257469886194 0.0 36 0.0 0.0 0.0 0.19244623344433417 0.0 37 0.0 0.0 0.0 0.23375668146118078 0.0 38 0.0 0.0 0.0 0.279601203040852 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACTCT 20 7.845593E-4 43.994457 6 ATAATTC 25 0.0023495238 35.195564 3 CGTCCGC 25 0.0023495238 35.195564 10 TGAGACC 25 0.0023495238 35.195564 16 ATACATG 110 0.0 34.030014 1 TAGAACC 55 1.3654244E-7 31.995968 4 GTCCTAT 35 3.1916844E-4 31.456314 1 GAGTGTG 35 3.2106243E-4 31.424614 7 TATATTG 35 3.2106243E-4 31.424614 5 GCTAGGA 35 3.2106243E-4 31.424614 20 GTCATAT 30 0.0057089156 29.359226 1 AAGGCCG 45 4.0491406E-5 29.33703 37 GATAATT 30 0.005730066 29.337029 42 TTTCGTA 30 0.005730066 29.337029 43 CGCGTTT 30 0.005730066 29.337029 28 TTTCGCG 30 0.0057371296 29.329638 25 AGAACCT 60 2.9276816E-7 29.329638 5 ATGACTT 30 0.0057371296 29.329638 5 AATAGGG 30 0.0057371296 29.329638 7 TACAGCG 30 0.0057371296 29.329638 5 >>END_MODULE