##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062065_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1345773 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.278283187432056 32.0 32.0 32.0 32.0 32.0 2 31.492224171535614 32.0 32.0 32.0 32.0 32.0 3 31.596157747257525 32.0 32.0 32.0 32.0 32.0 4 31.66854365483629 32.0 32.0 32.0 32.0 32.0 5 31.64555240742681 32.0 32.0 32.0 32.0 32.0 6 35.302580747273126 36.0 36.0 36.0 36.0 36.0 7 35.31062965299497 36.0 36.0 36.0 36.0 36.0 8 35.26193942068982 36.0 36.0 36.0 36.0 36.0 9 35.34600114580988 36.0 36.0 36.0 36.0 36.0 10 35.23324513123684 36.0 36.0 36.0 36.0 36.0 11 35.34093194023063 36.0 36.0 36.0 36.0 36.0 12 35.28042990905598 36.0 36.0 36.0 36.0 36.0 13 35.2983296588652 36.0 36.0 36.0 36.0 36.0 14 35.27033831114163 36.0 36.0 36.0 36.0 36.0 15 35.24628819273384 36.0 36.0 36.0 36.0 36.0 16 35.26445098839106 36.0 36.0 36.0 36.0 36.0 17 35.242193148473035 36.0 36.0 36.0 36.0 36.0 18 35.236145323171144 36.0 36.0 36.0 36.0 36.0 19 35.23521351669264 36.0 36.0 36.0 36.0 36.0 20 35.23137185840405 36.0 36.0 36.0 36.0 36.0 21 35.22962044861949 36.0 36.0 36.0 36.0 36.0 22 35.205510141754964 36.0 36.0 36.0 36.0 36.0 23 35.17775360331943 36.0 36.0 36.0 36.0 36.0 24 35.17514395072572 36.0 36.0 36.0 36.0 36.0 25 35.16263961306996 36.0 36.0 36.0 36.0 36.0 26 35.11317138923132 36.0 36.0 36.0 36.0 36.0 27 35.10640576085269 36.0 36.0 36.0 36.0 36.0 28 35.09088977115754 36.0 36.0 36.0 36.0 36.0 29 35.0801152943327 36.0 36.0 36.0 36.0 36.0 30 35.06119382689354 36.0 36.0 36.0 36.0 36.0 31 35.0510769646887 36.0 36.0 36.0 36.0 36.0 32 35.03744465076948 36.0 36.0 36.0 36.0 36.0 33 35.00863815814405 36.0 36.0 36.0 36.0 36.0 34 35.005958657217825 36.0 36.0 36.0 36.0 36.0 35 34.990505085181525 36.0 36.0 36.0 36.0 36.0 36 34.97207998674368 36.0 36.0 36.0 36.0 36.0 37 34.966695720600725 36.0 36.0 36.0 36.0 36.0 38 34.95024643829234 36.0 36.0 36.0 36.0 36.0 39 34.9383380406651 36.0 36.0 36.0 36.0 36.0 40 34.92138941708594 36.0 36.0 36.0 36.0 36.0 41 34.897299173040324 36.0 36.0 36.0 36.0 36.0 42 34.87079173084911 36.0 36.0 36.0 36.0 36.0 43 34.85951345434928 36.0 36.0 36.0 36.0 36.0 44 34.84220370002965 36.0 36.0 36.0 32.0 36.0 45 34.82037609611725 36.0 36.0 36.0 32.0 36.0 46 34.80719408102258 36.0 36.0 36.0 32.0 36.0 47 34.77899616057091 36.0 36.0 36.0 32.0 36.0 48 34.7605680898636 36.0 36.0 36.0 32.0 36.0 49 34.74583677930825 36.0 36.0 36.0 32.0 36.0 50 34.33682203462248 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 9.0 21 25.0 22 81.0 23 222.0 24 590.0 25 1444.0 26 3004.0 27 5557.0 28 9421.0 29 15510.0 30 23135.0 31 34240.0 32 51664.0 33 87673.0 34 202514.0 35 910684.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.05548663416418 17.34879022517102 12.042520327680952 26.55320281298385 2 16.08508842198816 19.359949350006612 37.18665146770543 27.368310760299796 3 19.255593452075765 22.11195077910787 28.06928375576807 30.56317201304829 4 13.476354092669487 15.456704404609397 33.89519175610727 37.17174974661384 5 15.248559749675467 35.957772967655025 33.042719686009455 15.750947596660062 6 36.20390378162126 33.62397196553354 15.91859542329607 14.253528829549136 7 31.48874290092014 29.834526327991423 19.33015449113632 19.346576279952117 8 28.383092839579927 33.914560627981096 18.340091531038297 19.362255001400683 9 26.914568801722133 14.8703384597551 18.174759041829493 40.040333696693274 10 16.42547866684401 27.3613079213446 31.35315198968025 24.86006142213114 11 37.29744912403503 21.27892296843524 21.429988564193216 19.993639343336504 12 24.594786787964985 23.320351946427813 28.62875091118636 23.456110354420844 13 30.20353358255813 19.61125687615965 24.27222124385019 25.912988297432033 14 23.203244529352276 19.14840021311172 25.054373954597096 32.59398130293891 15 25.151492859494134 26.860176270440856 21.70410611596458 26.284224754100432 16 25.80664097621726 26.114941230496235 23.017671720046426 25.060746073240075 17 24.572494766948065 25.697944601355506 24.976574801248056 24.752985830448374 18 24.725621763005563 25.609130832163 25.221025881094093 24.44422152373734 19 25.69305944840582 24.904218545191906 25.06761918066359 24.335102825738684 20 25.592857620544372 25.053240895546786 25.14768496845672 24.20621651545212 21 25.77910671347004 24.55557107741876 24.840017476957463 24.82530473215374 22 25.783545962060465 24.697627311589695 24.699039139587434 24.819787586762406 23 25.360146176212485 24.473518193632955 24.985565916391547 25.18076971376302 24 24.93726579166967 25.054448908681138 25.081125344322935 24.927159955326257 25 25.294069566121998 24.34762255065873 25.138322298758332 25.21998558446094 26 25.162305695727998 24.88499089364175 25.0107188264204 24.94198458420985 27 25.15091754299404 25.16823107697612 24.72179454408189 24.959056835947948 28 25.426512233780496 24.703862035859796 24.739455809104427 25.13016992125528 29 25.12041505110116 25.314431526525492 24.901877152126453 24.663276270246897 30 25.31764838762652 24.832193819204026 24.91601331303237 24.934144480137082 31 25.500682140405008 24.585811479575913 24.854357822025257 25.059148557993822 32 25.256807326142333 24.973769390587893 24.876054797452138 24.89336848581764 33 25.188907143658597 24.684362151843523 25.04014439349456 25.086586311003316 34 25.22886695993342 24.83563191059327 25.024075615265723 24.911425514207586 35 25.157939320983523 24.83098895056362 24.899797142156537 25.11127458629632 36 25.2130750425407 24.86353537380087 25.166484614755863 24.75690496890256 37 25.381718528470245 24.698236530247684 24.721792063345806 25.198252877936266 38 25.278260152343673 25.080158392239998 24.882056632136326 24.759524823280003 39 25.172782509899562 24.88930104542614 24.928460870269518 25.009455574404782 40 25.56190796063523 24.70009778773819 24.860080310780727 24.87791394084585 41 25.288703252216777 24.64415991273326 24.999647039328735 25.067489795721226 42 25.20771547531379 24.574667220525058 24.92570841733478 25.29190888682637 43 25.40394973070018 24.670954855125018 24.728470876383653 25.196624537791145 44 24.997956456927316 24.887828062973824 25.048339082501176 25.065876397597687 45 25.313655494655745 24.95184819698249 24.732415674898046 25.00208063346372 46 25.332362371771772 24.7922897725795 24.742428914838992 25.13291894080974 47 25.120285460153653 24.99448265920222 24.817258985091662 25.067972895552465 48 24.96299345771891 25.072155326415533 24.849372969470345 25.115478246395206 49 25.24031673656708 24.735086838014332 24.83072309032164 25.193873335096946 50 24.789262179843476 25.17009128009107 25.018279796811882 25.022366743253567 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 29.0 1 40.5 2 52.0 3 128.5 4 205.0 5 251.5 6 298.0 7 222.0 8 146.0 9 206.0 10 266.0 11 447.0 12 628.0 13 1091.5 14 1555.0 15 1977.0 16 2399.0 17 2309.5 18 2220.0 19 2137.0 20 2054.0 21 2549.5 22 3045.0 23 3665.0 24 4285.0 25 5743.0 26 7201.0 27 8710.0 28 10219.0 29 12370.0 30 14521.0 31 16720.0 32 18919.0 33 22512.5 34 26106.0 35 30148.0 36 34190.0 37 38256.5 38 42323.0 39 47944.5 40 53566.0 41 58178.0 42 62790.0 43 68103.0 44 73416.0 45 80724.5 46 88033.0 47 92804.5 48 97576.0 49 101128.0 50 104680.0 51 108657.0 52 112634.0 53 113489.0 54 114344.0 55 109739.5 56 105135.0 57 101412.5 58 97690.0 59 88015.0 60 78340.0 61 69399.0 62 60458.0 63 52864.0 64 45270.0 65 37850.5 66 30431.0 67 25845.5 68 21260.0 69 17020.5 70 12781.0 71 9892.5 72 7004.0 73 5467.5 74 3931.0 75 3323.0 76 2715.0 77 2139.0 78 1563.0 79 1220.0 80 877.0 81 607.5 82 338.0 83 237.0 84 136.0 85 109.0 86 82.0 87 52.5 88 23.0 89 16.0 90 9.0 91 7.0 92 5.0 93 6.0 94 7.0 95 7.5 96 8.0 97 9.0 98 10.0 99 5.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.032694964158145545 2 0.0049785513604448895 3 2.2292021016917415E-4 4 7.430673672305805E-5 5 0.0 6 7.430673672305805E-5 7 0.0 8 0.0 9 0.0 10 2.972269468922322E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.201471570614063E-4 17 0.0 18 2.2292021016917415E-4 19 7.430673672305805E-5 20 2.2292021016917415E-4 21 7.430673672305805E-5 22 0.0 23 0.0 24 0.0011889077875689288 25 2.2292021016917415E-4 26 7.430673672305805E-4 27 3.7153368361529025E-4 28 0.0023778155751378576 29 8.173741039536386E-4 30 0.0017833616813533932 31 6.687606305075225E-4 32 0.0012632145242919867 33 4.458404203383483E-4 34 9.659875773997547E-4 35 2.2292021016917415E-4 36 2.2292021016917415E-4 37 0.0012632145242919867 38 0.0 39 4.458404203383483E-4 40 7.430673672305805E-5 41 0.0010402943141228126 42 0.004607017676829599 43 0.004532710940106541 44 0.005275778307337121 45 0.0021548953649686833 46 0.002080588628245625 47 0.0011889077875689288 48 0.004829937886998773 49 0.0036410300994298445 50 0.0018576684180764513 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1345773.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.214288463787895 #Duplication Level Percentage of deduplicated Percentage of total 1 59.485111974307806 23.921514522355377 2 17.092693102732667 13.747409821125785 3 7.94040708960184 9.579534636634648 4 4.57651046492677 7.361644479764368 5 2.8156177814724237 5.661403283395129 6 1.8580494410409438 4.4832081721200225 7 1.291648893279229 3.6359918831784315 8 0.9414291738727921 3.0287123493076797 9 0.7004062013266636 2.5349703319778714 >10 3.160547382099832 21.28508180214995 >50 0.10951481921799876 2.9617864828107185 >100 0.02750612370708846 1.6451544559623925 >500 5.575524139535019E-4 0.15358777921759073 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.430673672305805E-5 2 0.0 0.0 0.0 0.0 7.430673672305805E-5 3 0.0 0.0 0.0 0.0 7.430673672305805E-5 4 0.0 0.0 0.0 7.430673672305805E-5 7.430673672305805E-5 5 0.0 0.0 0.0 7.430673672305805E-5 7.430673672305805E-5 6 2.972269468922322E-4 0.0 0.0 7.430673672305805E-5 7.430673672305805E-5 7 5.201471570614063E-4 0.0 0.0 7.430673672305805E-5 7.430673672305805E-5 8 5.201471570614063E-4 0.0 0.0 7.430673672305805E-5 7.430673672305805E-5 9 5.201471570614063E-4 0.0 0.0 7.430673672305805E-5 7.430673672305805E-5 10 5.944538937844644E-4 0.0 0.0 7.430673672305805E-5 1.486134734461161E-4 11 5.944538937844644E-4 0.0 0.0 1.486134734461161E-4 1.486134734461161E-4 12 5.944538937844644E-4 0.0 0.0 1.486134734461161E-4 2.2292021016917415E-4 13 5.944538937844644E-4 0.0 0.0 2.972269468922322E-4 2.972269468922322E-4 14 0.0010402943141228126 0.0 0.0 3.7153368361529025E-4 2.972269468922322E-4 15 0.0010402943141228126 0.0 0.0 6.687606305075224E-4 2.972269468922322E-4 16 0.0011889077875689288 0.0 0.0 7.430673672305805E-4 2.972269468922322E-4 17 0.001263214524291987 0.0 0.0 8.916808406766966E-4 4.458404203383483E-4 18 0.0013375212610150448 0.0 0.0 0.001263214524291987 4.458404203383483E-4 19 0.001709054944630335 0.0 0.0 0.001634748207907277 4.458404203383483E-4 20 0.001709054944630335 0.0 0.0 0.0022292021016917414 4.458404203383483E-4 21 0.001709054944630335 0.0 0.0 0.002823655995476206 4.458404203383483E-4 22 0.0018576684180764513 0.0 0.0 0.0034924166259837283 4.458404203383483E-4 23 0.0018576684180764513 0.0 0.0 0.0042354839932143085 4.458404203383483E-4 24 0.002526429048583974 0.0 0.0 0.00572161872767547 4.458404203383483E-4 25 0.002526429048583974 0.0 0.0 0.007727900619198037 4.458404203383483E-4 26 0.002526429048583974 0.0 0.0 0.009808489247443663 4.458404203383483E-4 27 0.002526429048583974 0.0 0.0 0.011368930718627882 4.458404203383483E-4 28 0.002823655995476206 0.0 0.0 0.013226599136704332 4.458404203383483E-4 29 0.0031208829423684382 0.0 0.0 0.0175363898666417 4.458404203383483E-4 30 0.003269496415814554 0.0 0.0 0.0235552355412094 4.458404203383483E-4 31 0.003269496415814554 0.0 0.0 0.03321511131520695 5.201471570614063E-4 32 0.003269496415814554 0.0 0.0 0.04458404203383483 5.201471570614063E-4 33 0.003343803152537612 0.0 0.0 0.05810786811743139 5.201471570614063E-4 34 0.00341810988926067 0.0 0.0 0.07029417294001292 5.201471570614063E-4 35 0.003938257046322077 0.0 0.0 0.08627012133547039 5.201471570614063E-4 36 0.004309790729937367 0.0 0.0 0.10692739414448053 5.201471570614063E-4 37 0.004384097466660425 0.0 0.0 0.1370959292540421 5.201471570614063E-4 38 0.004532710940106541 0.0 0.0 0.17469513803590947 5.201471570614063E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATAGG 105 0.0 29.334423 1 GGTATCA 555 0.0 26.163134 1 GTATCAA 1220 0.0 25.968178 1 GTATTAG 75 5.4716606E-5 20.534096 1 CGTAACA 65 4.932564E-4 20.307692 2 TATACCG 65 4.932564E-4 20.307692 5 CTTACGA 55 0.0044838707 20.0 2 CGCGGAT 140 4.0745363E-9 18.859945 42 ACGTAAC 60 0.0074109375 18.334017 1 GTATTAC 145 6.3064363E-9 18.207573 1 TATCAAC 1790 0.0 17.698324 2 GCACCGT 200 3.6379788E-12 17.6 6 TGTTACG 75 0.0012909735 17.6 2 ATCAACG 1790 0.0 17.574766 3 TCAACGC 1795 0.0 17.526463 4 CTATATA 140 8.3740815E-8 17.285715 2 CAACGCA 1850 0.0 17.005405 5 GTATAAG 225 1.8189894E-12 16.62284 1 TCGCGGA 160 2.1276719E-8 16.501226 41 CCTCGCG 175 3.623427E-9 16.344072 39 >>END_MODULE