##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062064_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 948404 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.281183968013632 32.0 32.0 32.0 32.0 32.0 2 31.509922986406636 32.0 32.0 32.0 32.0 32.0 3 31.627425654046167 32.0 32.0 32.0 32.0 32.0 4 31.695730933230987 32.0 32.0 32.0 32.0 32.0 5 31.68482418884779 32.0 32.0 32.0 32.0 32.0 6 35.34886925824859 36.0 36.0 36.0 36.0 36.0 7 35.343967338813414 36.0 36.0 36.0 36.0 36.0 8 35.30695463114875 36.0 36.0 36.0 36.0 36.0 9 35.38033686066276 36.0 36.0 36.0 36.0 36.0 10 35.2772573713312 36.0 36.0 36.0 36.0 36.0 11 35.37547395413769 36.0 36.0 36.0 36.0 36.0 12 35.307848764872354 36.0 36.0 36.0 36.0 36.0 13 35.33329467189088 36.0 36.0 36.0 36.0 36.0 14 35.31098350491985 36.0 36.0 36.0 36.0 36.0 15 35.29259682582528 36.0 36.0 36.0 36.0 36.0 16 35.30404553333811 36.0 36.0 36.0 36.0 36.0 17 35.285386818275754 36.0 36.0 36.0 36.0 36.0 18 35.28283938068587 36.0 36.0 36.0 36.0 36.0 19 35.25012020193926 36.0 36.0 36.0 36.0 36.0 20 35.242486324393404 36.0 36.0 36.0 36.0 36.0 21 35.214189311727914 36.0 36.0 36.0 36.0 36.0 22 35.16797061168025 36.0 36.0 36.0 36.0 36.0 23 35.16719351668698 36.0 36.0 36.0 36.0 36.0 24 35.14010590423491 36.0 36.0 36.0 36.0 36.0 25 35.09203356375553 36.0 36.0 36.0 36.0 36.0 26 35.07464224107026 36.0 36.0 36.0 36.0 36.0 27 35.027291112226436 36.0 36.0 36.0 36.0 36.0 28 34.95913028624932 36.0 36.0 36.0 36.0 36.0 29 34.92320361364988 36.0 36.0 36.0 36.0 36.0 30 34.86334410230239 36.0 36.0 36.0 32.0 36.0 31 34.87385649997258 36.0 36.0 36.0 36.0 36.0 32 34.837000898351334 36.0 36.0 36.0 32.0 36.0 33 34.86786643666623 36.0 36.0 36.0 36.0 36.0 34 34.842695728824424 36.0 36.0 36.0 36.0 36.0 35 34.82961375110185 36.0 36.0 36.0 36.0 36.0 36 34.759777478795954 36.0 36.0 36.0 32.0 36.0 37 34.65702485438695 36.0 36.0 36.0 32.0 36.0 38 34.62685943964808 36.0 36.0 36.0 32.0 36.0 39 34.44829313246254 36.0 36.0 36.0 32.0 36.0 40 34.53925015077962 36.0 36.0 36.0 32.0 36.0 41 34.525875049029736 36.0 36.0 36.0 32.0 36.0 42 34.49648145726926 36.0 36.0 36.0 32.0 36.0 43 34.53362912851485 36.0 36.0 36.0 32.0 36.0 44 34.401182407497224 36.0 36.0 36.0 32.0 36.0 45 34.38084930050906 36.0 36.0 36.0 32.0 36.0 46 34.227549651836135 36.0 36.0 36.0 32.0 36.0 47 34.23949287434469 36.0 36.0 36.0 32.0 36.0 48 34.19655969397008 36.0 36.0 36.0 32.0 36.0 49 34.14346312331032 36.0 36.0 36.0 32.0 36.0 50 33.818175587618775 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 8.0 21 19.0 22 53.0 23 169.0 24 413.0 25 1053.0 26 2312.0 27 4653.0 28 8210.0 29 13098.0 30 19655.0 31 29106.0 32 43687.0 33 73750.0 34 163485.0 35 588731.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.43254634590882 20.745753558741384 12.72561196850925 25.09608812684055 2 12.994294282578 21.180432900615493 44.194582784571466 21.630690032235037 3 18.45810110058815 26.178455971202087 29.722733608743972 25.6407093194658 4 10.628909199033323 17.440457863948275 39.691523865356956 32.239109071661446 5 11.447336788963353 40.34630811342002 35.14609807634721 13.060257021269416 6 30.879699874420474 39.17912532963308 18.169174918257323 11.771999877689126 7 27.885373743678855 31.53086659271787 22.265405881881563 18.318353781721715 8 24.260336312373205 40.10284646627387 19.86980232053007 15.767014900822856 9 26.30524544392474 14.576383060383549 21.046726922282065 38.07164457340965 10 15.967351466252778 28.53636214102851 32.72423988089464 22.772046511824076 11 35.24057258299206 21.4714404409935 26.041012058152436 17.24697491786201 12 24.678617972931367 24.562949966469986 32.08263567003091 18.675796390567733 13 29.73806521271526 21.8928853104795 26.32433013778938 22.044719339015863 14 20.068451841198474 24.620731249551877 26.612498471115686 28.698318438133956 15 21.65374671553473 35.39788950700334 22.218274068856733 20.730089708605192 16 20.843552363258308 27.85424623099682 30.93081567365462 20.37138573209025 17 19.928005364802342 31.025596686644086 28.515379521807162 20.53101842674641 18 20.76661584433605 26.739610418366894 33.626352538269636 18.86742119902742 19 24.41079961704084 25.919123074132965 26.975634856031817 22.694442452794377 20 24.559574019401094 27.287853226486714 27.97543230704344 20.177140447068748 21 23.794606517897435 26.34562907790351 25.82538664957128 24.034377754627776 22 23.69074782476666 29.960544240640065 27.03605214655358 19.312655788039695 23 20.272900578234594 29.556391579959595 29.177122829511475 20.99358501229434 24 23.539558939049655 26.964081421770462 29.70323546623506 19.793124172944818 25 21.537115141290595 28.473428932939687 29.2909110080135 20.69854491775622 26 18.930594393059437 30.828156171050914 30.515206727991263 19.72604270789839 27 20.662927734002253 29.064771261884502 29.17843650193642 21.093864502176825 28 19.66536726196062 29.890982862408965 27.85267133636938 22.590978539261037 29 20.93893268212856 27.782487484131103 27.679998650352804 23.59858118338753 30 19.630868767984445 28.350708411843662 29.845980921330806 22.17244189884109 31 23.53954027836356 27.003268663011387 27.853964571910588 21.603226486714465 32 21.092754894600546 29.216716294528 28.124446431433412 21.56608237943804 33 19.658961384314797 29.437883080608646 30.338138986099704 20.565016548976853 34 21.35382123730885 29.458233208245073 30.034679569842588 19.153265984603493 35 21.13407605635585 29.635639739266683 29.762168363204633 19.468115841172835 36 18.92697513609721 29.42209166356496 30.647941855940985 21.002991344396843 37 20.697479718173824 28.790387036502015 27.706967416220824 22.80516582910334 38 20.860097595539454 30.123660381019057 27.740498774783738 21.275743248657744 39 23.423468069738878 27.04274063022264 28.024820881594692 21.50897041844379 40 24.464335233724974 27.143897992515825 29.069771120022015 19.321995653737183 41 22.880647327948072 26.88848797595085 30.62671408733318 19.604150608767902 42 22.404993884179003 30.472921675313174 28.856341473701967 18.265742966805853 43 20.214284810473615 29.642626670771982 29.899384624469082 20.243703894285318 44 19.35798844957047 30.235890687426647 28.6000191909638 21.806101672039084 45 19.691368438811445 30.658069550180304 28.423100444969318 21.22746156603893 46 20.337081495103206 27.746695403510845 28.953284351354313 22.962938750031633 47 23.041210807345486 27.340698782781804 28.786303553804753 20.831786856067954 48 21.331126037306113 29.03181247825216 27.29862817254869 22.338433311893038 49 22.299676918664485 28.645314898857826 27.30785939635247 21.747148786125216 50 20.645915028717056 31.205589255908166 26.680873184161385 21.467622531213394 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 111.0 1 67.5 2 24.0 3 56.0 4 88.0 5 97.5 6 107.0 7 98.0 8 89.0 9 123.5 10 158.0 11 282.0 12 406.0 13 749.0 14 1092.0 15 1464.5 16 1837.0 17 2087.0 18 2337.0 19 2638.0 20 2939.0 21 3632.5 22 4326.0 23 5683.5 24 7041.0 25 9539.5 26 12038.0 27 17460.5 28 22883.0 29 28619.0 30 34355.0 31 41328.5 32 48302.0 33 58458.5 34 68615.0 35 79408.0 36 90201.0 37 91666.0 38 93131.0 39 86663.0 40 80195.0 41 72968.5 42 65742.0 43 58949.5 44 52157.0 45 50700.0 46 49243.0 47 48393.5 48 47544.0 49 46488.0 50 45432.0 51 38556.5 52 31681.0 53 29755.0 54 27829.0 55 29970.5 56 32112.0 57 31259.0 58 30406.0 59 27502.5 60 24599.0 61 21298.5 62 17998.0 63 15239.5 64 12481.0 65 10734.0 66 8987.0 67 8774.5 68 8562.0 69 8625.0 70 8688.0 71 6579.0 72 4470.0 73 4317.0 74 4164.0 75 2829.0 76 1494.0 77 1517.5 78 1541.0 79 1346.5 80 1152.0 81 904.0 82 656.0 83 632.0 84 608.0 85 484.0 86 360.0 87 249.0 88 138.0 89 89.5 90 41.0 91 30.0 92 19.0 93 14.5 94 10.0 95 8.5 96 7.0 97 4.5 98 2.0 99 4.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03331913403992392 2 0.006010096962897668 3 2.1088059518939185E-4 4 0.0 5 0.0 6 1.0544029759469592E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0010544029759469594 17 0.0 18 2.1088059518939185E-4 19 0.0 20 4.217611903787837E-4 21 0.0 22 0.0 23 0.0 24 9.489626783522635E-4 25 4.217611903787837E-4 26 8.435223807575674E-4 27 5.272014879734797E-4 28 0.0022142462494886142 29 8.435223807575674E-4 30 0.001581604463920439 31 4.217611903787837E-4 32 0.0012652835711363512 33 7.380820831628715E-4 34 7.380820831628715E-4 35 2.1088059518939185E-4 36 1.0544029759469592E-4 37 0.001897925356704527 38 0.0 39 9.489626783522635E-4 40 3.163208927840878E-4 41 0.001370723868731047 42 0.004639373094166621 43 0.0042176119037878376 44 0.004323052201382533 45 0.0025305671422727024 46 0.002952328332651486 47 0.0012652835711363512 48 0.0035849701182196617 49 0.003795850713409054 50 0.001370723868731047 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 948404.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.4710625825804 #Duplication Level Percentage of deduplicated Percentage of total 1 80.85852757424664 45.66166970980585 2 12.685770044747041 14.327578282102676 3 3.223585633011043 5.461179180662209 4 1.1521156377383774 2.6024477712437375 5 0.5288578939854109 1.4932583614270905 6 0.3068750819564764 1.03977371749192 7 0.18835771218328262 0.7445732106829672 8 0.13263279933419872 0.5991932089363491 9 0.0996685891096982 0.5065552019818131 >10 0.6236545838457863 6.9773014759435075 >50 0.09725281654488428 3.826697251173276 >100 0.0899109537680832 10.527994995912684 >500 0.009593009646846626 3.7349452021331158 >1k 0.0031976698822822084 2.4968324305028444 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2444 0.25769608732143684 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 1683 0.17745602085187326 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1681 0.17724514025668386 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 1450 0.1528884315123091 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1426 0.1503578643700364 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1371 0.14455864800232812 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1348 0.14213352115765013 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1347 0.14202808086005542 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 1330 0.1402355958009456 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1318 0.13897031222980924 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1300 0.13707238687310472 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1212 0.12779364068477148 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 1204 0.1269501183040139 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 1150 0.12125634223390032 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1120 0.11809313330605944 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1083 0.11419184229505569 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAAT 1039 0.10955246920088908 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG 970 0.10227708866685506 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 1.0544029759469594E-4 0.0 4 0.0 0.0 0.0 1.0544029759469594E-4 0.0 5 0.0 0.0 0.0 1.0544029759469594E-4 0.0 6 0.0 0.0 0.0 1.0544029759469594E-4 0.0 7 0.0 0.0 0.0 1.0544029759469594E-4 0.0 8 0.0 0.0 0.0 1.0544029759469594E-4 0.0 9 0.0 0.0 0.0 1.0544029759469594E-4 0.0 10 0.0 0.0 0.0 1.0544029759469594E-4 0.0 11 0.0 0.0 0.0 1.0544029759469594E-4 0.0 12 1.0544029759469594E-4 0.0 0.0 1.0544029759469594E-4 0.0 13 1.0544029759469594E-4 0.0 0.0 1.0544029759469594E-4 0.0 14 1.0544029759469594E-4 0.0 0.0 1.0544029759469594E-4 0.0 15 1.0544029759469594E-4 0.0 0.0 1.0544029759469594E-4 0.0 16 1.0544029759469594E-4 0.0 0.0 2.1088059518939187E-4 0.0 17 1.0544029759469594E-4 0.0 0.0 2.1088059518939187E-4 0.0 18 1.0544029759469594E-4 0.0 0.0 2.1088059518939187E-4 0.0 19 1.0544029759469594E-4 0.0 0.0 2.1088059518939187E-4 0.0 20 1.0544029759469594E-4 0.0 0.0 2.1088059518939187E-4 0.0 21 1.0544029759469594E-4 0.0 0.0 3.163208927840878E-4 0.0 22 1.0544029759469594E-4 0.0 0.0 4.2176119037878374E-4 0.0 23 1.0544029759469594E-4 0.0 0.0 6.326417855681756E-4 0.0 24 1.0544029759469594E-4 0.0 0.0 8.435223807575675E-4 0.0 25 1.0544029759469594E-4 0.0 0.0 0.0011598432735416553 0.0 26 1.0544029759469594E-4 0.0 0.0 0.001687044761515135 0.0 27 1.0544029759469594E-4 0.0 0.0 0.0021088059518939188 0.0 28 1.0544029759469594E-4 0.0 0.0 0.003268649225435574 0.0 29 1.0544029759469594E-4 0.0 0.0 0.0039012910110037494 0.0 30 1.0544029759469594E-4 0.0 0.0 0.006010096962897668 0.0 31 1.0544029759469594E-4 0.0 0.0 0.008435223807575675 0.0 32 1.0544029759469594E-4 0.0 0.0 0.012758276008958208 0.0 33 1.0544029759469594E-4 0.0 0.0 0.01739764910312483 0.0 34 1.0544029759469594E-4 0.0 0.0 0.023407746066022497 0.0 35 1.0544029759469594E-4 0.0 0.0 0.028574320648162597 0.0 36 1.0544029759469594E-4 0.0 0.0 0.03658778326535949 0.0 37 1.0544029759469594E-4 0.0 0.0 0.05050590254785935 0.0 38 1.0544029759469594E-4 0.0 0.0 0.06663826807984782 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGAGTA 25 0.0023520263 35.20156 36 GGTATCA 730 0.0 28.943472 1 GTATCAA 1800 0.0 26.900011 1 CGATAAA 50 8.343035E-5 26.398388 21 GGACCTG 1765 0.0 26.0494 6 AGGACCT 1855 0.0 25.852869 5 TACTCGC 60 9.746735E-6 25.667805 44 CGGTAGG 45 0.0013946283 24.454554 1 CTGTAGG 2965 0.0 24.347332 1 TGTAGGA 3110 0.0 24.334202 2 GTAGGAC 3175 0.0 23.69619 3 TAGGACC 1680 0.0 23.569988 4 GACCTGG 1945 0.0 22.620724 7 GTCCTAC 2490 0.0 22.274267 1 CGTAAAC 60 2.8702614E-4 22.002134 40 CGCGGGA 220 0.0 22.000977 44 TCCTACA 2650 0.0 21.999817 2 TAGGACG 3085 0.0 21.606459 4 CCTACAG 2635 0.0 21.53948 3 CGCTTCG 225 0.0 21.512064 32 >>END_MODULE