##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062062_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2034691 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31396757542054 32.0 32.0 32.0 32.0 32.0 2 31.484582671275394 32.0 32.0 32.0 32.0 32.0 3 31.59040660228015 32.0 32.0 32.0 32.0 32.0 4 31.661218828804962 32.0 32.0 32.0 32.0 32.0 5 31.640625529871613 32.0 32.0 32.0 32.0 32.0 6 35.287269664042356 36.0 36.0 36.0 36.0 36.0 7 35.29336149813412 36.0 36.0 36.0 36.0 36.0 8 35.24977797611529 36.0 36.0 36.0 36.0 36.0 9 35.323957790150935 36.0 36.0 36.0 36.0 36.0 10 35.20753716411976 36.0 36.0 36.0 36.0 36.0 11 35.32153678371802 36.0 36.0 36.0 36.0 36.0 12 35.24617644644813 36.0 36.0 36.0 36.0 36.0 13 35.27800879838757 36.0 36.0 36.0 36.0 36.0 14 35.24689596602138 36.0 36.0 36.0 36.0 36.0 15 35.22481349747947 36.0 36.0 36.0 36.0 36.0 16 35.234145627026415 36.0 36.0 36.0 36.0 36.0 17 35.21879685908081 36.0 36.0 36.0 36.0 36.0 18 35.21459376386881 36.0 36.0 36.0 36.0 36.0 19 35.20552260760971 36.0 36.0 36.0 36.0 36.0 20 35.206258345861855 36.0 36.0 36.0 36.0 36.0 21 35.196236185248765 36.0 36.0 36.0 36.0 36.0 22 35.1770873316882 36.0 36.0 36.0 36.0 36.0 23 35.1513836744744 36.0 36.0 36.0 36.0 36.0 24 35.13716726520145 36.0 36.0 36.0 36.0 36.0 25 35.11692979425377 36.0 36.0 36.0 36.0 36.0 26 35.07972168746999 36.0 36.0 36.0 36.0 36.0 27 35.06623757612335 36.0 36.0 36.0 36.0 36.0 28 35.049616870571505 36.0 36.0 36.0 36.0 36.0 29 35.026282123428075 36.0 36.0 36.0 36.0 36.0 30 35.011543767579454 36.0 36.0 36.0 36.0 36.0 31 35.01398345006687 36.0 36.0 36.0 36.0 36.0 32 34.99022357694608 36.0 36.0 36.0 36.0 36.0 33 34.97252064318366 36.0 36.0 36.0 36.0 36.0 34 34.95768399231137 36.0 36.0 36.0 36.0 36.0 35 34.94230721028402 36.0 36.0 36.0 36.0 36.0 36 34.924305951124765 36.0 36.0 36.0 36.0 36.0 37 34.909006330691 36.0 36.0 36.0 36.0 36.0 38 34.89098737842749 36.0 36.0 36.0 32.0 36.0 39 34.880536651511214 36.0 36.0 36.0 32.0 36.0 40 34.868814478463804 36.0 36.0 36.0 32.0 36.0 41 34.85186497605779 36.0 36.0 36.0 32.0 36.0 42 34.81330187237276 36.0 36.0 36.0 32.0 36.0 43 34.81292294505652 36.0 36.0 36.0 32.0 36.0 44 34.77138395952997 36.0 36.0 36.0 32.0 36.0 45 34.75239385243263 36.0 36.0 36.0 32.0 36.0 46 34.741990798602835 36.0 36.0 36.0 32.0 36.0 47 34.70828396056207 36.0 36.0 36.0 32.0 36.0 48 34.68941082454289 36.0 36.0 36.0 32.0 36.0 49 34.67243035920442 36.0 36.0 36.0 32.0 36.0 50 34.269550020125905 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 6.0 20 13.0 21 61.0 22 138.0 23 363.0 24 964.0 25 2208.0 26 4553.0 27 8842.0 28 15069.0 29 24410.0 30 36381.0 31 53735.0 32 81563.0 33 139124.0 34 320465.0 35 1346796.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.983650545653695 17.469177620873182 11.972819081311693 26.574352752161424 2 16.28486484121995 19.59842859087775 36.74552382843468 27.37118273946762 3 18.698794209611133 23.024236711191232 28.16410623379968 30.112862845397952 4 12.795112378243184 15.523683940215 34.91070634312532 36.7704973384165 5 15.019283026267871 36.098798294188164 33.00442180163966 15.87749687790431 6 35.62118614745848 34.41770925075491 16.16468962317564 13.796414978610972 7 31.15382139106135 29.777740207235396 19.97050166339754 19.09793673830572 8 28.481474582627044 32.905684450366174 18.835980500233205 19.77686046677358 9 27.230916144023837 14.37667930904496 18.29167180667728 40.100732740253925 10 16.449139672382525 26.492979274484075 30.796583263298093 26.261297789835307 11 37.57263387905092 21.10502282656187 21.704327585859478 19.618015708527732 12 24.85478138940999 23.288155302205592 28.258590616462154 23.59847269192226 13 29.566455053863216 19.297180751278695 24.97735528392272 26.159008910935373 14 23.676322350666513 19.147723167793046 24.82313039178922 32.35282408975122 15 25.327334715689016 26.971368134031167 21.828474200750875 25.872822949528945 16 26.216309198498045 25.62742052804372 23.231122338647847 24.925147934810386 17 24.38458714369897 25.807260168743067 24.81005715364151 24.998095533916455 18 25.1357947754152 24.88902475465526 25.632529409914444 24.342651060015097 19 25.76307655560476 24.823916751978555 25.062675364465658 24.350331327951025 20 25.959140624155275 24.2523907865882 24.726567145987143 25.06190144326938 21 26.56752302929536 24.15801711414657 24.465336505641396 24.809123350916675 22 26.083518332759127 24.072254705997125 24.848343065359803 24.995883895883946 23 24.706650788743843 24.142486500407188 25.278924416533027 25.871938294315942 24 24.995564380377115 24.57038382239828 25.153231613066524 25.28082018415808 25 25.214013786921 24.21095778111764 25.143044465916542 25.431983966044818 26 24.81649475618561 25.11143013432559 25.338492531760476 24.733582577728324 27 25.401229182895634 24.6319700592475 24.849251849794932 25.117548908061938 28 24.994605975743355 24.51550849552677 25.2219659412216 25.267919587508274 29 24.90226993255962 24.700174867276818 25.231903104459363 25.1656520957042 30 24.853919441283946 24.793762118088235 25.44787471156185 24.904443729065964 31 25.412349042898065 24.528821183043657 24.62279154895797 25.43603822510031 32 25.306300784937996 24.59591985582029 24.566873562122453 25.530905797119257 33 24.882254617049206 24.375985102376927 25.080614364764703 25.661145915809165 34 25.45190308221518 24.468944149747895 25.176920320857455 24.902232447179472 35 25.7827989183589 24.302423076582823 25.218633243655287 24.696144761402987 36 24.891604896283752 24.84722458403901 24.90389180443567 25.357278715241566 37 25.730747548856986 24.588985989325995 24.731564883226362 24.948701578590658 38 25.029021620001078 24.489430822385717 25.065538239240375 25.416009318372822 39 25.692627001480822 24.399156427960943 24.659492077627892 25.248724492930343 40 25.86545082275392 24.448577204106176 24.921622005503536 24.764349967636363 41 24.868983474937174 24.89041204285517 25.26270883638453 24.977895645823125 42 25.86248250263444 24.848519998112646 24.90779478145987 24.38120271779305 43 25.430035810513917 24.182811543115644 25.033544710060664 25.35360793630978 44 24.953467580653328 24.728018193229833 24.859395174390286 25.459119051726553 45 25.210736593879336 24.858292511386484 24.83661801126386 25.094352883470318 46 25.030607304959833 24.66848025085457 24.87564169670876 25.42527074747683 47 25.220392762830997 24.608792709161172 25.166329755836713 25.004484772171114 48 25.785069861535163 25.030423730313046 24.28182302530822 24.90268338284357 49 25.123783179642643 25.05045202855 24.469160122402076 25.35660466940528 50 25.286572206661283 25.20567389132201 24.46766107046263 25.040092831554077 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 258.0 1 157.5 2 57.0 3 202.5 4 348.0 5 354.0 6 360.0 7 303.5 8 247.0 9 337.5 10 428.0 11 665.0 12 902.0 13 1746.5 14 2591.0 15 3255.5 16 3920.0 17 3776.0 18 3632.0 19 3556.5 20 3481.0 21 4118.0 22 4755.0 23 5843.5 24 6932.0 25 8749.5 26 10567.0 27 13397.0 28 16227.0 29 18997.0 30 21767.0 31 25542.5 32 29318.0 33 33773.5 34 38229.0 35 44368.5 36 50508.0 37 59140.0 38 67772.0 39 75331.5 40 82891.0 41 90928.0 42 98965.0 43 104176.0 44 109387.0 45 120302.5 46 131218.0 47 140114.0 48 149010.0 49 155830.0 50 162650.0 51 160321.5 52 157993.0 53 157370.5 54 156748.0 55 156387.5 56 156027.0 57 150113.5 58 144200.0 59 132581.5 60 120963.0 61 106435.5 62 91908.0 63 79309.5 64 66711.0 65 56505.5 66 46300.0 67 39734.0 68 33168.0 69 29210.0 70 25252.0 71 19764.0 72 14276.0 73 12300.5 74 10325.0 75 7665.5 76 5006.0 77 4368.0 78 3730.0 79 3113.0 80 2496.0 81 1976.5 82 1457.0 83 1179.5 84 902.0 85 700.0 86 498.0 87 332.5 88 167.0 89 113.0 90 59.0 91 44.0 92 29.0 93 22.5 94 16.0 95 15.0 96 14.0 97 13.0 98 12.0 99 13.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030324014801264666 2 0.004128390994013342 3 4.423276065014295E-4 4 0.0 5 0.0 6 1.4744253550047647E-4 7 0.0 8 0.0 9 0.0 10 4.9147511833492163E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.406226301684138E-4 17 0.0 18 1.4744253550047647E-4 19 0.0 20 2.457375591674608E-4 21 0.0 22 0.0 23 0.0 24 0.0012778353076707961 25 4.423276065014295E-4 26 3.931800946679373E-4 27 2.9488507100095294E-4 28 0.0015727203786717492 29 2.457375591674608E-4 30 0.0012778353076707961 31 3.440325828344451E-4 32 3.931800946679373E-4 33 1.9659004733396865E-4 34 8.84655213002859E-4 35 2.457375591674608E-4 36 2.457375591674608E-4 37 0.0013761303313377805 38 4.9147511833492163E-5 39 4.914751183349216E-4 40 0.0 41 0.0011795402840038118 42 0.004865603671515724 43 0.00457071860051477 44 0.0043249810413473104 45 0.002064195497006671 46 0.0022607855443406394 47 0.0013761303313377805 48 0.004669013624181755 49 0.004177538505846834 50 0.0018676054496727021 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2034691.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.333112703503474 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8331468953088 39.91084657325335 2 14.58844524051392 15.560943883624354 3 4.614085576853628 7.382506382818331 4 2.0483892468296676 4.36987898247245 5 1.006964282244538 2.6852269776675213 6 0.6303491394913393 2.017108901942882 7 0.41665797801513726 1.555516683020663 8 0.30476067402511825 1.300306830030185 9 0.21831715042025407 1.0479179869624016 >10 1.2001594547118595 11.409878949979541 >50 0.07564094022528178 2.774557520111226 >100 0.05425933993790014 5.951241837428447 >500 0.006687724867750411 2.432538395573972 >1k 0.0021363565549758225 1.6015300951146716 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2091 0.1027674472438321 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 4.9147511833492163E-5 9 0.0 0.0 0.0 0.0 4.9147511833492163E-5 10 0.0 0.0 0.0 0.0 4.9147511833492163E-5 11 0.0 0.0 0.0 0.0 4.9147511833492163E-5 12 0.0 0.0 0.0 0.0 1.474425355004765E-4 13 0.0 0.0 0.0 0.0 2.457375591674608E-4 14 0.0 0.0 0.0 0.0 2.457375591674608E-4 15 0.0 0.0 0.0 4.9147511833492163E-5 2.94885071000953E-4 16 0.0 0.0 0.0 4.9147511833492163E-5 2.94885071000953E-4 17 0.0 0.0 0.0 4.9147511833492163E-5 2.94885071000953E-4 18 0.0 0.0 0.0 4.9147511833492163E-5 3.931800946679373E-4 19 0.0 0.0 0.0 9.829502366698433E-5 3.931800946679373E-4 20 0.0 0.0 0.0 1.9659004733396865E-4 3.931800946679373E-4 21 0.0 0.0 0.0 2.94885071000953E-4 3.931800946679373E-4 22 0.0 0.0 0.0 3.931800946679373E-4 3.931800946679373E-4 23 0.0 0.0 0.0 5.89770142001906E-4 3.931800946679373E-4 24 0.0 0.0 0.0 0.0010320977485033353 3.931800946679373E-4 25 0.0 0.0 0.0 0.001228687795837304 3.931800946679373E-4 26 0.0 0.0 0.0 0.001523572866838257 4.4232760650142944E-4 27 0.0 0.0 0.0 0.0019167529615061944 4.4232760650142944E-4 28 0.0 0.0 0.0 0.002752260662675561 4.4232760650142944E-4 29 0.0 0.0 0.0 0.00363691587567842 4.4232760650142944E-4 30 0.0 0.0 0.0 0.007322979263190332 4.4232760650142944E-4 31 0.0 0.0 0.0 0.013613860777877329 4.4232760650142944E-4 32 4.9147511833492163E-5 0.0 0.0 0.019953889804397818 5.406226301684138E-4 33 4.9147511833492163E-5 0.0 0.0 0.02663795141375275 5.406226301684138E-4 34 4.9147511833492163E-5 0.0 0.0 0.033960930676943085 5.89770142001906E-4 35 4.9147511833492163E-5 0.0 0.0 0.042660040271471196 5.89770142001906E-4 36 4.9147511833492163E-5 0.0 0.0 0.05396396799317439 5.89770142001906E-4 37 4.9147511833492163E-5 0.0 0.0 0.07308235009640285 5.89770142001906E-4 38 4.9147511833492163E-5 0.0 0.0 0.09667315577647909 5.89770142001906E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2515 0.0 28.171406 1 GGTATCA 1085 0.0 21.293652 1 TCAACGC 3700 0.0 18.966806 4 ATCAACG 3710 0.0 18.91568 3 CAACGCA 3810 0.0 18.476948 5 AACGCAG 3850 0.0 18.227839 6 ACCGTCG 550 0.0 17.999275 8 ATACCGT 585 0.0 17.674501 6 TACCGTC 590 0.0 17.52472 7 TATCAAC 4040 0.0 17.479496 2 CGTCGTA 585 0.0 17.298449 10 CCGTCGT 590 0.0 16.778986 9 GTACCGT 185 4.2382453E-10 16.64798 6 GTAGGAC 540 0.0 15.888249 3 TAGGACG 320 0.0 15.811865 4 TACACCG 195 8.931238E-10 15.794237 5 GCGAAAG 690 0.0 15.622943 18 CGAGTAT 85 0.0029816763 15.528787 15 GATATAC 200 1.2751116E-9 15.402409 1 AGCGAAA 690 0.0 15.303732 17 >>END_MODULE