##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062061_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1476599 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31949026106614 32.0 32.0 32.0 32.0 32.0 2 30.94570970182155 32.0 32.0 32.0 32.0 32.0 3 30.97688201062035 32.0 32.0 32.0 32.0 32.0 4 30.966183777721643 32.0 32.0 32.0 32.0 32.0 5 30.940113057099456 32.0 32.0 32.0 32.0 32.0 6 34.58462182352826 36.0 36.0 36.0 32.0 36.0 7 34.54041009102674 36.0 36.0 36.0 32.0 36.0 8 34.50578728551218 36.0 36.0 36.0 32.0 36.0 9 34.58379763226171 36.0 36.0 36.0 32.0 36.0 10 34.3618050669139 36.0 36.0 36.0 32.0 36.0 11 34.58761044806342 36.0 36.0 36.0 32.0 36.0 12 34.46111774422169 36.0 36.0 36.0 32.0 36.0 13 34.5091158804794 36.0 36.0 36.0 32.0 36.0 14 34.4404723286417 36.0 36.0 36.0 32.0 36.0 15 34.400981579968565 36.0 36.0 36.0 32.0 36.0 16 34.413149406169175 36.0 36.0 36.0 32.0 36.0 17 34.37679762752108 36.0 36.0 36.0 32.0 36.0 18 34.36802882840907 36.0 36.0 36.0 32.0 36.0 19 34.37557928726756 36.0 36.0 36.0 32.0 36.0 20 34.35455665349902 36.0 36.0 36.0 32.0 36.0 21 34.34210709881288 36.0 36.0 36.0 32.0 36.0 22 34.32376698074427 36.0 36.0 36.0 32.0 36.0 23 34.29314119811811 36.0 36.0 36.0 32.0 36.0 24 34.25901412638096 36.0 36.0 36.0 32.0 36.0 25 33.96132870196986 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 18.0 5 118.0 6 307.0 7 52.0 8 280.0 9 208.0 10 103.0 11 30.0 12 71.0 13 64.0 14 246.0 15 322.0 16 567.0 17 647.0 18 909.0 19 1133.0 20 1652.0 21 2348.0 22 3468.0 23 5213.0 24 7347.0 25 10328.0 26 14278.0 27 18637.0 28 24960.0 29 33362.0 30 43751.0 31 59892.0 32 85529.0 33 124726.0 34 291856.0 35 744177.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.135562090184195 18.343629662638886 11.861615166960364 25.659193080216554 2 16.574359641174215 18.88027446948857 39.29279138341345 25.252574505923768 3 19.020826335236816 22.8695536749488 29.664592521156823 28.445027468657557 4 12.615750774832572 15.903506252844664 37.859240555712084 33.621502416610674 5 13.672250781116624 36.877376206903094 34.89538592445457 14.554987087525708 6 32.013295700582454 38.28877150301728 16.444586000210073 13.253346796190193 7 29.21247302467391 31.659727490730248 19.883467947244636 19.244331537351208 8 27.13331082354632 35.111674307790146 18.552268132243643 19.202746736419886 9 27.456654845774654 15.26658032669058 18.98432997240285 38.292434855131916 10 16.391319179064144 27.58387072491406 31.48903300711195 24.535777088909853 11 35.99356509307149 22.776708458294507 22.687184036439152 18.542542412194855 12 22.6593181385085 25.363476133220214 29.850445652019115 22.126760076252168 13 28.887607990994535 20.749935578370607 25.89281597113911 24.469640459495746 14 22.26726659533699 21.00848768885074 25.566874282126495 31.157371433685775 15 24.98748777599796 28.203027619123834 23.075321553984313 23.734163050893894 16 24.98777787948752 28.066057086287156 23.379543458877055 23.56662157534827 17 22.614875732679472 27.639883801986 25.420485460330205 24.324755005004324 18 22.813482487858426 27.657365866358933 26.836559447443914 22.692592198338723 19 25.851228329920083 26.19282464699793 25.605013242873692 22.350933780208294 20 23.59658791263169 26.44957450587232 26.570844060503273 23.382993520992716 21 25.878453263378375 24.26250732934075 25.67984083891719 24.179198568363685 22 24.13152567560055 25.6720752675488 26.180123086685402 24.01627597016524 23 23.734750549180177 26.435815562217492 26.95710463941179 22.87232924919055 24 24.136500531775358 27.078448558105862 25.15368612849238 23.6313647816264 25 23.29140677214735 26.60278266197964 25.767550251545813 24.338260314327197 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 105.0 1 105.0 2 292.0 3 479.0 4 479.0 5 479.0 6 1038.0 7 1597.0 8 1597.0 9 1597.0 10 1984.5 11 2372.0 12 2372.0 13 2372.0 14 3323.5 15 4275.0 16 4275.0 17 4275.0 18 7004.5 19 9734.0 20 9734.0 21 9734.0 22 15200.5 23 20667.0 24 20667.0 25 20667.0 26 31152.0 27 41637.0 28 41637.0 29 41637.0 30 56245.0 31 70853.0 32 70853.0 33 70853.0 34 88510.0 35 106167.0 36 106167.0 37 106167.0 38 124948.0 39 143729.0 40 143729.0 41 143729.0 42 171656.5 43 199584.0 44 199584.0 45 199584.0 46 204477.0 47 209370.0 48 209370.0 49 209370.0 50 207903.5 51 206437.0 52 206437.0 53 206437.0 54 187571.5 55 168706.0 56 168706.0 57 168706.0 58 146824.0 59 124942.0 60 124942.0 61 124942.0 62 105198.0 63 85454.0 64 85454.0 65 85454.0 66 65935.0 67 46416.0 68 46416.0 69 46416.0 70 33895.0 71 21374.0 72 21374.0 73 21374.0 74 14266.0 75 7158.0 76 7158.0 77 7158.0 78 5173.5 79 3189.0 80 3189.0 81 3189.0 82 2169.0 83 1149.0 84 1149.0 85 1149.0 86 791.0 87 433.0 88 433.0 89 433.0 90 290.0 91 147.0 92 147.0 93 147.0 94 114.5 95 82.0 96 82.0 97 82.0 98 312.5 99 543.0 100 543.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.001422187066359926 2 3.3861596818093474E-4 3 4.740623554533086E-4 4 0.010226202239064229 5 0.03433565917354678 6 0.0632534628561986 7 0.11106603756334658 8 0.11411358127697499 9 0.12251125728786216 10 0.138019868630549 11 0.14499535757507623 12 0.13666540475782524 13 0.13131527246056646 14 0.11898965121878045 15 0.13822303821145754 16 0.12284987325604312 17 0.12698098806785052 18 0.1156712147306073 19 0.09928220187065005 20 0.09298394486248467 21 0.09237443611975898 22 0.10436144139336409 23 0.08248684984887569 24 0.09156175779612474 25 0.08946233879340296 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1476599.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.456899879974852 #Duplication Level Percentage of deduplicated Percentage of total 1 61.771158717536146 18.81357996530034 2 15.542025734022106 9.467238434262077 3 7.660244287451308 6.999218799571614 4 4.1965730584453285 5.112584219202769 5 2.64427012420549 4.026813521426764 6 1.8225726464093772 3.3305947569402727 7 1.270356454882891 2.7083783550773606 8 0.8846060932071372 2.1553887371220384 9 0.6593262914284896 1.807293136164537 >10 3.109656379478174 16.420109527834676 >50 0.21105623734371873 4.483886987519306 >100 0.18890168407996746 12.312460407145656 >500 0.02497873096085635 5.134685868518786 >1k 0.014273560549060775 7.227767283913773 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGTAAAGGTATAAGGGAGCTTGAC 4201 0.28450513646562137 No Hit GGCCTATTCACTGCGGCTGACGTAA 3605 0.24414211305845393 No Hit GTATCAACGCAGAGTACTTTTTTTT 3303 0.22368970858032544 No Hit GTCCTAAGGTAGCGAAATTCCTTGT 3003 0.20337275048946937 No Hit CCTTTACACTCTGCGAATGATTTCC 2963 0.20066382274402192 No Hit CCCTTATACCTTTACACTCTGCGAA 2503 0.16951115367137592 No Hit CGTTGAGACAGTGCCCAAATCATTA 2481 0.1680212434113798 No Hit TTCCAGCACCGGGCAGGCGTCACCC 2310 0.15644057729959185 No Hit GTGCTGGAAGGTTAAGAGGAGTGCT 2296 0.15549245258868521 No Hit GTATAAGGGAGCTTGACTGCGAGAG 2261 0.15312214081141867 No Hit GAATAGGCCCAAGCAACTGTTTATC 2241 0.15176767693869492 No Hit TCCCTACATAGCTACCCAGCGATGC 2101 0.14228642982962877 No Hit GTGATGGGGAGCGAAGTTTAGTAGC 2090 0.14154147469963071 No Hit GTCTCACGACGTTCTGAACCCAGCT 2076 0.14059334998872408 No Hit GTCTCAACGAGAGACTCGGTGAAAT 2029 0.1374103598878233 No Hit GTACTAGAGTATGTAGTGATGGAGG 2010 0.13612361920873575 No Hit GTTCTATAACATTGAGCTGTGATGG 1944 0.13165388842874742 No Hit GTATAGGGGGTGACGCCTGCCCGGT 1942 0.13151844204147503 No Hit CTCTAACCCAGATAGGTGATCCCTA 1913 0.1295544694260256 No Hit TATCAACGCAGAGTACTTTTTTTTT 1900 0.12867406790875519 No Hit GGTGTGAACTGAGTCAAATGCTTAG 1867 0.12643920251876103 No Hit GTTAAGAGGAGTGCTTAGCGTAAGC 1847 0.12508473864603728 No Hit CCTCTTAACCTTCCAGCACCGGGCA 1816 0.12298531964331548 No Hit CCCCCTATACATCATCTTACGATTT 1792 0.121359962996047 No Hit GCCCAACCCTTGGGACCGACTACAG 1722 0.11661933944151391 No Hit GATAGGGACCGAACTGTCTCACGAC 1647 0.1115400999187999 No Hit GGATAGGTAGGAGTCTATGAGATCG 1620 0.10971157369062284 No Hit GGTATAAGGGAGCTTGACTGCGAGA 1618 0.10957612730335047 No Hit CTATAACATTGAGCTGTGATGGGGA 1598 0.10822166343062672 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGAATC 100 1.8189894E-12 16.151846 12 GGTATCA 585 0.0 16.069492 1 TAGGCCC 405 0.0 15.24607 4 CGAATCG 110 1.2732926E-11 14.682998 13 ATAGGCC 430 0.0 14.137793 3 GACGCTG 55 1.958145E-4 13.819761 11 CCTTATA 425 0.0 13.632689 2 AATAGGC 440 0.0 13.599675 2 CCCTTAT 430 0.0 13.470514 1 AGTTCGG 120 5.0931703E-11 13.460328 10 TTATACC 445 0.0 13.448694 4 CTGACGT 640 0.0 13.358183 17 CGTTACG 150 0.0 13.300617 16 CCACGCG 50 0.0015004922 13.298813 18 GCGAAAT 360 0.0 13.195952 12 CGCATAG 195 0.0 13.155794 10 CGTAGGA 110 2.752131E-9 12.952511 19 ATCGAAT 125 1.0186341E-10 12.921476 11 AATTCCT 405 0.0 12.901834 16 GTATCAA 1855 0.0 12.694939 1 >>END_MODULE