##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062061_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1476599 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.330216260474238 32.0 32.0 32.0 32.0 32.0 2 31.517402490452724 32.0 32.0 32.0 32.0 32.0 3 31.620144670286244 32.0 32.0 32.0 32.0 32.0 4 31.67835614137623 32.0 32.0 32.0 32.0 32.0 5 31.664031331458304 32.0 32.0 32.0 32.0 32.0 6 35.316905943996986 36.0 36.0 36.0 36.0 36.0 7 35.32857600472437 36.0 36.0 36.0 36.0 36.0 8 35.284936533209084 36.0 36.0 36.0 36.0 36.0 9 35.35385639567682 36.0 36.0 36.0 36.0 36.0 10 35.26339310808147 36.0 36.0 36.0 36.0 36.0 11 35.35343244848466 36.0 36.0 36.0 36.0 36.0 12 35.29764614495879 36.0 36.0 36.0 36.0 36.0 13 35.31569979391832 36.0 36.0 36.0 36.0 36.0 14 35.28598624271044 36.0 36.0 36.0 36.0 36.0 15 35.27086365357148 36.0 36.0 36.0 36.0 36.0 16 35.29660320777679 36.0 36.0 36.0 36.0 36.0 17 35.27618398766354 36.0 36.0 36.0 36.0 36.0 18 35.27706371194888 36.0 36.0 36.0 36.0 36.0 19 35.26346489466673 36.0 36.0 36.0 36.0 36.0 20 35.26376084502292 36.0 36.0 36.0 36.0 36.0 21 35.253567149916805 36.0 36.0 36.0 36.0 36.0 22 35.23947259885724 36.0 36.0 36.0 36.0 36.0 23 35.230711926528464 36.0 36.0 36.0 36.0 36.0 24 35.20489652234628 36.0 36.0 36.0 36.0 36.0 25 35.187790320865716 36.0 36.0 36.0 36.0 36.0 26 35.15751873054228 36.0 36.0 36.0 36.0 36.0 27 35.143530504896724 36.0 36.0 36.0 36.0 36.0 28 35.14156924120902 36.0 36.0 36.0 36.0 36.0 29 35.12912849053805 36.0 36.0 36.0 36.0 36.0 30 35.113466147545815 36.0 36.0 36.0 36.0 36.0 31 35.122246459600746 36.0 36.0 36.0 36.0 36.0 32 35.08588790863328 36.0 36.0 36.0 36.0 36.0 33 35.065969840152945 36.0 36.0 36.0 36.0 36.0 34 35.06588315446509 36.0 36.0 36.0 36.0 36.0 35 35.045707737848936 36.0 36.0 36.0 36.0 36.0 36 35.04195587292149 36.0 36.0 36.0 36.0 36.0 37 35.03104972981832 36.0 36.0 36.0 36.0 36.0 38 35.018848042020885 36.0 36.0 36.0 36.0 36.0 39 35.00652309801104 36.0 36.0 36.0 36.0 36.0 40 34.995382632657886 36.0 36.0 36.0 36.0 36.0 41 34.97432275113284 36.0 36.0 36.0 36.0 36.0 42 34.95386560603116 36.0 36.0 36.0 36.0 36.0 43 34.9428646504569 36.0 36.0 36.0 36.0 36.0 44 34.91494102325682 36.0 36.0 36.0 36.0 36.0 45 34.897617430324686 36.0 36.0 36.0 36.0 36.0 46 34.87558368927515 36.0 36.0 36.0 36.0 36.0 47 34.84398540158838 36.0 36.0 36.0 36.0 36.0 48 34.82001071380923 36.0 36.0 36.0 36.0 36.0 49 34.80688121825899 36.0 36.0 36.0 36.0 36.0 50 34.42849751354294 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 2.0 20 12.0 21 37.0 22 75.0 23 224.0 24 570.0 25 1390.0 26 2963.0 27 5699.0 28 9833.0 29 15853.0 30 24310.0 31 35011.0 32 53575.0 33 90843.0 34 212681.0 35 1023520.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.76639231815124 18.83953897526121 12.288437866463248 26.1056308401243 2 16.077213100653758 19.264197239893075 39.06431061327959 25.59427904617358 3 18.582537132702512 23.189145846257205 29.875267168541704 28.353049852498586 4 12.427680094595758 16.145480255641512 38.0945673131297 33.33227233663303 5 13.439735500294933 37.156533358074874 34.655109477928676 14.748621663701519 6 32.19980278965946 38.26849050112556 16.368932328138502 13.162774381076476 7 29.179418379668416 31.54485408699315 19.940078518270703 19.335649015067734 8 27.159980468630955 35.12104505014564 18.53766662445254 19.181307856770864 9 27.540923432834507 15.044301127117112 19.003331303894964 38.41144413615341 10 16.293872807629427 27.616656666201635 31.6172715932163 24.472198932952637 11 36.29360442476258 22.547150580489355 22.766980067032417 18.392264927715647 12 22.633294482794582 25.21029744703877 29.96873220149817 22.187675868668475 13 29.077088634084134 20.567669353697244 25.947328963381395 24.407913048837226 14 22.25275785775285 20.91637607772997 25.630384417164038 31.20048164735314 15 25.020604781663806 28.197499795137336 23.086159478639768 23.695735944559086 16 25.049658300775228 27.974367986802033 23.45903503407511 23.516938678347625 17 22.813302731479567 27.464057608057434 25.52778377880521 24.19485588165778 18 22.960142164624358 27.41355467093955 26.89601367467652 22.73028948975957 19 25.863352203272523 26.06895981915198 25.736642107979215 22.33104586959628 20 23.606321566630275 26.34925192808324 26.71177492015419 23.33265158513229 21 25.988640111499468 24.10302323108711 25.863352203272523 24.0449844541409 22 24.210025877032287 25.563135285883305 26.218357184313412 24.008481652770996 23 23.797930243756092 26.290414662342315 27.083859598983885 22.827795494917712 24 24.227760986006206 26.793414254396808 25.233529032909086 23.7452957266879 25 23.380714929570978 26.35194667724959 25.89501643309971 24.372321960079724 26 24.34724778781439 25.43116117226536 26.29097775014662 23.93061328977363 27 25.498325539501355 25.6326209962786 25.210162569966716 23.658890894253332 28 23.819956561696408 26.26080454998283 26.41304855757607 23.50619033074469 29 24.85285363380923 25.62747571941045 25.478009821270753 24.04166082550957 30 23.00213466831372 27.453514075807817 27.36655614069306 22.177795115185404 31 24.87118987506366 24.957198738717263 26.967638995741545 23.20397239047753 32 23.777793730427906 26.408987723081257 25.943591730146174 23.869626816344663 33 23.97258557695238 25.962501566103096 25.519252063023373 24.54566079392115 34 23.870601158621735 25.286777165101565 26.48345977399156 24.35916190228514 35 24.140436802829214 25.565744927681493 26.56751047851371 23.726307790975575 36 23.87453829556398 26.260231316123456 26.173138994198812 23.692091394113753 37 24.734638924049133 24.872932120525025 26.100030272800602 24.29239868262524 38 24.19593945275596 25.906220984844225 26.861185738308098 23.03665382409171 39 25.52118570891618 25.797498958746022 25.347135451057678 23.334179881280114 40 24.137036620664528 26.266526163519117 26.044123044999385 23.552314170816974 41 24.101507262709063 26.151644606740966 26.07085001598284 23.675998114567136 42 24.81669761778016 26.498284482046326 24.951135167643965 23.73388273252955 43 24.713178483577693 25.388614371010913 25.68586576075767 24.21234138465373 44 23.90777257938239 25.645299365265988 26.18027204434198 24.26665601100964 45 24.11883264118589 26.224261190168523 26.022305839773963 23.634600328871624 46 24.456204463600002 26.632402479807876 25.675587816596074 23.235805239996044 47 23.685714711407833 26.17314852815489 26.013387675049536 24.12774908538774 48 23.86311456424302 26.78996894077617 25.693753073075186 23.653163421905624 49 24.525728279943408 25.87443372183509 25.99376780783555 23.606070190385953 50 23.515667698109066 26.80212898380236 25.596431737543625 24.08577158054495 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 43.0 1 39.5 2 36.0 3 114.5 4 193.0 5 241.5 6 290.0 7 237.0 8 184.0 9 251.5 10 319.0 11 523.0 12 727.0 13 1478.0 14 2229.0 15 2856.0 16 3483.0 17 3301.5 18 3120.0 19 2937.0 20 2754.0 21 3334.5 22 3915.0 23 4895.5 24 5876.0 25 7591.5 26 9307.0 27 11807.5 28 14308.0 29 17436.0 30 20564.0 31 24438.5 32 28313.0 33 33955.0 34 39597.0 35 43675.5 36 47754.0 37 55905.0 38 64056.0 39 70225.5 40 76395.0 41 85207.0 42 94019.0 43 99685.0 44 105351.0 45 109012.0 46 112673.0 47 112068.0 48 111463.0 49 115873.0 50 120283.0 51 125484.0 52 130685.0 53 122457.5 54 114230.0 55 106248.0 56 98266.0 57 88240.0 58 78214.0 59 73261.0 60 68308.0 61 56746.0 62 45184.0 63 37328.0 64 29472.0 65 25064.5 66 20657.0 67 15241.5 68 9826.0 69 7970.0 70 6114.0 71 4782.5 72 3451.0 73 2739.5 74 2028.0 75 1535.5 76 1043.0 77 908.0 78 773.0 79 653.0 80 533.0 81 407.0 82 281.0 83 198.5 84 116.0 85 97.5 86 79.0 87 57.0 88 35.0 89 28.5 90 22.0 91 15.0 92 8.0 93 10.5 94 13.0 95 9.0 96 5.0 97 3.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.033590704043548726 2 0.004198838005443591 3 2.0316958090856082E-4 4 0.0 5 0.0 6 2.0316958090856082E-4 7 0.0 8 0.0 9 0.0 10 6.772319363618693E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.417855490894955E-4 17 0.0 18 6.772319363618693E-5 19 0.0 20 2.0316958090856082E-4 21 0.0 22 0.0 23 0.0 24 0.001083571098178991 25 4.0633916181712163E-4 26 3.3861596818093474E-4 27 2.7089277454474774E-4 28 0.0014899102599961129 29 5.417855490894955E-4 30 0.0015576334536322996 31 4.740623554533086E-4 32 4.740623554533086E-4 33 2.7089277454474774E-4 34 0.001151294291815178 35 4.0633916181712163E-4 36 3.3861596818093474E-4 37 0.0017608030345408604 38 0.0 39 9.481247109066172E-4 40 6.772319363618693E-5 41 0.001015847904542804 42 0.0052146859099863946 43 0.004808346748169273 44 0.005079239522714021 45 0.002370311777266543 46 0.0022348653899941693 47 0.001151294291815178 48 0.004402007586352151 49 0.004876069941805459 50 0.0017608030345408604 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1476599.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.876101061636657 #Duplication Level Percentage of deduplicated Percentage of total 1 60.38173896596211 18.643526745904097 2 16.1907059483894 9.998117462434257 3 7.806122503483226 7.230678819511926 4 4.45065578064513 5.496755906950257 5 2.8046076614255644 4.329767479620808 6 1.87001315161239 3.46432290334643 7 1.3146953033663684 2.841486553639934 8 0.907947456601662 2.2427101942951095 9 0.6877484654868663 1.9111492012822213 >10 3.1701685958827284 16.68607541003386 >50 0.20222853708812996 4.361749022268331 >100 0.17703568807096073 11.582571895081282 >500 0.024441488244797298 5.125486621056046 >1k 0.011890453740712197 6.085601784575306 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGTAAAGGTATAAGGGAGCTTGACTGCGAGAGCTACAACTCGAGCAGGG 4038 0.2734662559029229 No Hit GGCCTATTCACTGCGGCTGACGTAAAGTCAGCACCCCTTCTCCCGAAGTT 3272 0.22159028957760368 No Hit CCTTTACACTCTGCGAATGATTTCCAACCATTCTGAGGGAACCTTTGGGC 3001 0.203237304102197 No Hit GTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAA 2650 0.1794664631358954 No Hit CGTTGAGACAGTGCCCAAATCATTACGCCTTTCGTGCGGGTCGGAACTTA 2559 0.17330365251500238 No Hit CCCTTATACCTTTACACTCTGCGAATGATTTCCAACCATTCTGAGGGAAC 2532 0.17147512628682532 No Hit TTCCAGCACCGGGCAGGCGTCACCCCCTATACATCATCTTACGATTTAGC 2383 0.16138437043503348 No Hit GTATAAGGGAGCTTGACTGCGAGAGCTACAACTCGAGCAGGGACGAAAGT 2153 0.1458080358987105 No Hit GAATAGGCCCAAGCAACTGTTTATCAAAAACACAGCTCTCTGCTAAATCG 2111 0.14296366176599062 No Hit TCCCTACATAGCTACCCAGCGATGCCTTTGGCAAGACAACTGGTACACCA 2108 0.14276049218508208 No Hit GTGCTGGAAGGTTAAGAGGAGTGCTTAGCGTAAGCGAAGGTATGAATTGA 2064 0.13978067166508984 No Hit CTCTAACCCAGATAGGTGATCCCTATCGGAGACAGTGTCTGACGGGCAGT 1978 0.13395647701237776 No Hit GTGATGGGGAGCGAAGTTTAGTAGCGAAGTTAGTGACGTCACACTGCCAA 1961 0.13280518272056258 No Hit GTCTCAACGAGAGACTCGGTGAAATTTTAGTACCTGTGAAGATGCAGGTT 1950 0.13206022759056452 No Hit GTCTCACGACGTTCTGAACCCAGCTCGCGTGCCGCTTTAATGGGCGAACA 1919 0.12996080858784276 No Hit GTACTAGAGTATGTAGTGATGGAGGGACGCAGTAGGCTAACTAAAGCAGA 1910 0.12935129984511706 No Hit GTTAAGAGGAGTGCTTAGCGTAAGCGAAGGTATGAATTGAAGCCCCAGTA 1882 0.12745505042330382 No Hit GTATAGGGGGTGACGCCTGCCCGGTGCTGGAAGGTTAAGAGGAGTGCTTA 1790 0.12122451660877462 No Hit CCCCCTATACATCATCTTACGATTTAGCAGAGAGCTGTGTTTTTGATAAA 1730 0.11716112499060341 No Hit CCTCTTAACCTTCCAGCACCGGGCAGGCGTCACCCCCTATACATCATCTT 1729 0.11709340179696721 No Hit GTTCTATAACATTGAGCTGTGATGGGGAGCGAAGTTTAGTAGCGAAGTTA 1724 0.11675478582878628 No Hit GCCCAACCCTTGGGACCGACTACAGCCCCAGGATGCGACGAGCCGACATC 1654 0.1120141622742532 No Hit GGATAGGTAGGAGTCTATGAGATCGGGACGCCAGTTTCGAAGGAGACGTT 1630 0.11038880562698472 No Hit GGTGTGAACTGAGTCAAATGCTTAGTTCTATAACATTGAGCTGTGATGGG 1607 0.1088311721733524 No Hit GGTATAAGGGAGCTTGACTGCGAGAGCTACAACTCGAGCAGGGACGAAAG 1546 0.104700057361545 No Hit CTATAACATTGAGCTGTGATGGGGAGCGAAGTTTAGTAGCGAAGTTAGTG 1526 0.10334559348882127 No Hit GATAGGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCGCGTGCCGC 1482 0.10036577296882905 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 6.772319363618693E-5 0.0 16 0.0 0.0 0.0 2.0316958090856082E-4 0.0 17 0.0 0.0 0.0 2.0316958090856082E-4 0.0 18 0.0 0.0 0.0 2.0316958090856082E-4 0.0 19 0.0 0.0 0.0 2.0316958090856082E-4 0.0 20 0.0 0.0 0.0 3.386159681809347E-4 0.0 21 0.0 0.0 0.0 5.417855490894955E-4 0.0 22 0.0 0.0 0.0 8.804015172704302E-4 0.0 23 0.0 0.0 0.0 0.0013544638727237387 0.0 24 0.0 0.0 0.0 0.0019639726154494215 0.0 25 0.0 0.0 0.0 0.0026412045518112905 0.0 26 0.0 0.0 0.0 0.003250713294536973 0.0 27 0.0 0.0 0.0 0.0037924988436264686 0.0 28 0.0 0.0 0.0 0.004876069941805459 0.0 29 0.0 0.0 0.0 0.006907765750891068 0.0 30 0.0 0.0 0.0 0.010226202239064229 0.0 31 0.0 0.0 0.0 0.01679535202177436 0.0 32 0.0 0.0 0.0 0.02526075122629773 0.0 33 0.0 0.0 0.0 0.03237168655809736 0.0 34 0.0 0.0 0.0 0.04192065686079972 0.0 35 0.0 0.0 0.0 0.05295953742349819 0.0 36 0.0 0.0 0.0 0.0658946674080099 0.0 37 0.0 0.0 0.0 0.08946233879340294 0.0 38 0.0 0.0 0.0 0.121359962996047 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 850 0.0 31.326206 1 GTATCAA 2095 0.0 24.054304 1 CGACCCG 640 0.0 23.032084 37 TAACGTG 140 7.2759576E-12 22.000051 26 ATATACC 70 3.2175987E-5 21.998562 3 TTGTCGG 705 0.0 21.844023 22 TCGGGTA 720 0.0 21.694494 25 GTCGGGT 730 0.0 21.39731 24 TGTCGGG 730 0.0 21.09594 23 CGCACGA 700 0.0 20.74712 42 CCGCACG 680 0.0 20.709436 41 GGTATAA 1095 0.0 20.69271 8 GTGTAAA 1285 0.0 20.550362 1 ACCCGCA 740 0.0 20.51634 39 GCCTACG 65 4.923794E-4 20.313242 1 CCCGCAC 715 0.0 20.31049 40 TAAACCG 65 4.935052E-4 20.306364 5 CACGAAA 765 0.0 20.135538 44 TGTAAAG 1275 0.0 20.015055 2 CGAATCG 110 1.2669807E-7 19.998692 13 >>END_MODULE