##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062056_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 766938 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.263721448148353 32.0 32.0 32.0 32.0 32.0 2 31.42847270574675 32.0 32.0 32.0 32.0 32.0 3 31.562718237980125 32.0 32.0 32.0 32.0 32.0 4 31.64589054134754 32.0 32.0 32.0 32.0 32.0 5 31.609263069504966 32.0 32.0 32.0 32.0 32.0 6 35.253488547966064 36.0 36.0 36.0 36.0 36.0 7 35.26178778467099 36.0 36.0 36.0 36.0 36.0 8 35.209318093509516 36.0 36.0 36.0 36.0 36.0 9 35.304756055900214 36.0 36.0 36.0 36.0 36.0 10 35.18501234780386 36.0 36.0 36.0 36.0 36.0 11 35.30348998224107 36.0 36.0 36.0 36.0 36.0 12 35.22564796632844 36.0 36.0 36.0 36.0 36.0 13 35.26243712008011 36.0 36.0 36.0 36.0 36.0 14 35.22034766826002 36.0 36.0 36.0 36.0 36.0 15 35.203586209054706 36.0 36.0 36.0 36.0 36.0 16 35.21406945541882 36.0 36.0 36.0 36.0 36.0 17 35.194294714827016 36.0 36.0 36.0 36.0 36.0 18 35.182710988371944 36.0 36.0 36.0 36.0 36.0 19 35.1856108316448 36.0 36.0 36.0 36.0 36.0 20 35.180399197849106 36.0 36.0 36.0 36.0 36.0 21 35.177560637235345 36.0 36.0 36.0 36.0 36.0 22 35.156059551098004 36.0 36.0 36.0 36.0 36.0 23 35.135151733256144 36.0 36.0 36.0 36.0 36.0 24 35.119857146209995 36.0 36.0 36.0 36.0 36.0 25 35.09582000109526 36.0 36.0 36.0 36.0 36.0 26 35.05874660011631 36.0 36.0 36.0 36.0 36.0 27 35.04224852595647 36.0 36.0 36.0 36.0 36.0 28 35.02975207904681 36.0 36.0 36.0 36.0 36.0 29 35.00624431179574 36.0 36.0 36.0 36.0 36.0 30 34.9848579676584 36.0 36.0 36.0 36.0 36.0 31 34.99469057472703 36.0 36.0 36.0 36.0 36.0 32 34.96189261713463 36.0 36.0 36.0 36.0 36.0 33 34.942692890429214 36.0 36.0 36.0 36.0 36.0 34 34.93674325695167 36.0 36.0 36.0 36.0 36.0 35 34.91188596731418 36.0 36.0 36.0 36.0 36.0 36 34.891065509858684 36.0 36.0 36.0 32.0 36.0 37 34.883114410812865 36.0 36.0 36.0 32.0 36.0 38 34.866118252062094 36.0 36.0 36.0 32.0 36.0 39 34.85266996810694 36.0 36.0 36.0 32.0 36.0 40 34.839818864106356 36.0 36.0 36.0 32.0 36.0 41 34.810417530491385 36.0 36.0 36.0 32.0 36.0 42 34.79373169669517 36.0 36.0 36.0 32.0 36.0 43 34.7762074639671 36.0 36.0 36.0 32.0 36.0 44 34.742937499511044 36.0 36.0 36.0 32.0 36.0 45 34.72952963603316 36.0 36.0 36.0 32.0 36.0 46 34.708315404895835 36.0 36.0 36.0 32.0 36.0 47 34.6754431257807 36.0 36.0 36.0 32.0 36.0 48 34.65950702664362 36.0 36.0 36.0 32.0 36.0 49 34.62944201486952 36.0 36.0 36.0 32.0 36.0 50 34.218277096714466 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 1.0 20 5.0 21 19.0 22 48.0 23 136.0 24 344.0 25 883.0 26 1788.0 27 3386.0 28 6000.0 29 9260.0 30 13871.0 31 21036.0 32 32025.0 33 54733.0 34 125105.0 35 498297.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.27098889661316 17.662510776663193 12.023821479764655 26.042678846958996 2 16.55750551890772 18.827005550854143 37.402612304719334 27.212876625518806 3 19.7759398751136 21.641934083242823 27.602397589371748 30.979728452271832 4 13.404473373336568 15.175802998417081 33.20477013787295 38.214953490373404 5 15.303714250695624 35.73326657435151 32.66209263330283 16.300926541650043 6 36.807064987084985 32.902181013564345 15.640919658329173 14.649834341021492 7 32.17456952191702 29.020989962682776 18.7523632940342 20.052077221366005 8 28.733222242215145 33.48914775379496 17.752543230352387 20.025086773637504 9 26.366538103471203 15.204618887054755 18.371758864471445 40.0570841450026 10 17.903142105359233 26.373187923926057 29.525854762705723 26.19781520800899 11 37.4944258857952 21.367046619153047 20.64430240775656 20.49422508729519 12 24.74215647157919 23.39002631242682 27.70028346489547 24.167533751098524 13 30.228519124101293 19.03178614177417 24.37785062156263 26.3618441125619 14 23.573613512435166 19.073510505412433 24.42805024656491 32.92482573558749 15 25.575470246617066 26.481801658021897 21.415160025973417 26.52756806938762 16 26.206200541637926 25.56650972118816 22.82872167451394 25.398568062659972 17 24.68413352839473 25.921391298905515 24.38971598747226 25.00475918522749 18 25.12797644659673 25.070475057957747 25.006975792045772 24.79457270339975 19 26.031960862546903 24.687132467031233 24.524277060205648 24.756629610216212 20 26.14399878999188 24.223632449601467 24.666172058461125 24.96619670194553 21 26.580245078480917 23.925010887451137 24.442262607929194 25.05248142613875 22 26.31894625119632 23.822003864719182 24.747763182943082 25.111286701141424 23 25.10594076705027 24.157363437461697 25.081166926140053 25.655528869347975 24 25.064771315206492 24.445548414520772 24.89461214793025 25.595068122342486 25 25.587596389799437 24.0374058920017 24.74189569430645 25.633102023892413 26 25.01228924114425 24.93757587058027 24.97395463216378 25.076180256111698 27 25.411637998477055 24.456799524341015 24.80076564406939 25.33079683311254 28 25.310591401494804 24.288977786586415 24.991394192905688 25.409036619013097 29 25.124456602523814 24.624283184732974 25.042050554545764 25.209209658197445 30 25.33415739918558 24.600582322483568 24.860580314475005 25.204679963855845 31 25.483060449869804 24.317639220114405 24.699028467936575 25.500271862079217 32 25.481201772251588 24.473683524266757 24.511235647395996 25.533879056085663 33 25.22664893374276 24.300103659371395 24.733256403736952 25.739991003148898 34 25.550832540127523 24.50471359837273 24.72702854237023 25.217425319129518 35 25.55398944111446 24.248797489233144 25.20754638255815 24.989666687094246 36 25.104180792139108 24.698279908623405 24.676244171612755 25.521295127624732 37 25.776903287552987 24.244285280269338 24.710955337106853 25.267856095070822 38 25.110634757959577 24.322696228378305 24.913356751132426 25.6533122625297 39 25.60973224588785 24.314837632915438 24.612385665017243 25.463044456179468 40 25.76991330448264 24.290782684888068 24.726542075815875 25.21276193481342 41 25.031521822750214 24.777521778417558 25.046516691897164 25.144439706935064 42 25.80780605352514 24.55417451218685 24.6298044574725 25.008214976815513 43 25.612368773462997 24.086613752267247 24.667003086455974 25.63401438781378 44 25.019363520431448 24.66025823243005 24.71684926183913 25.603528985299373 45 25.263065934037275 24.510312706182408 24.92926232009159 25.29735903968873 46 25.398087926187486 24.537107062572694 24.494729540132166 25.570075471107657 47 25.386019584577475 24.58594656617944 24.8625037487124 25.165530100530688 48 25.670036954066905 25.001499547527832 24.197742072609397 25.130721425795873 49 25.33394358557092 24.567998789927188 24.44972981994951 25.64832780455238 50 25.324251128864645 24.899565926607824 24.60357716114176 25.17260578338577 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 16.0 1 18.5 2 21.0 3 64.0 4 107.0 5 129.5 6 152.0 7 111.0 8 70.0 9 89.5 10 109.0 11 239.5 12 370.0 13 711.0 14 1052.0 15 1243.5 16 1435.0 17 1410.0 18 1385.0 19 1259.0 20 1133.0 21 1298.5 22 1464.0 23 1930.0 24 2396.0 25 2954.5 26 3513.0 27 4366.5 28 5220.0 29 6195.5 30 7171.0 31 8573.5 32 9976.0 33 11599.5 34 13223.0 35 15227.5 36 17232.0 37 19749.0 38 22266.0 39 25090.0 40 27914.0 41 30892.5 42 33871.0 43 36666.0 44 39461.0 45 43529.5 46 47598.0 47 51125.0 48 54652.0 49 57787.5 50 60923.0 51 61824.5 52 62726.0 53 63550.0 54 64374.0 55 63428.5 56 62483.0 57 60019.5 58 57556.0 59 53544.5 60 49533.0 61 43554.0 62 37575.0 63 32584.0 64 27593.0 65 23225.5 66 18858.0 67 15933.0 68 13008.0 69 10744.0 70 8480.0 71 6495.0 72 4510.0 73 3866.5 74 3223.0 75 2389.0 76 1555.0 77 1331.0 78 1107.0 79 921.5 80 736.0 81 581.5 82 427.0 83 330.5 84 234.0 85 178.5 86 123.0 87 90.0 88 57.0 89 38.0 90 19.0 91 14.0 92 9.0 93 9.5 94 10.0 95 7.5 96 5.0 97 5.0 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030641329546847333 2 0.0037812704547173304 3 1.303886363695631E-4 4 0.0 5 0.0 6 1.303886363695631E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 6.519431818478155E-4 17 0.0 18 0.0 19 0.0 20 1.303886363695631E-4 21 0.0 22 0.0 23 0.0 24 0.0011734977273260682 25 0.0 26 9.127204545869418E-4 27 2.607772727391262E-4 28 0.0018254409091738835 29 5.215545454782524E-4 30 0.0011734977273260682 31 6.519431818478155E-4 32 5.215545454782524E-4 33 3.911659091086894E-4 34 0.0010431090909565049 35 1.303886363695631E-4 36 2.607772727391262E-4 37 0.001955829545543447 38 0.0 39 3.911659091086894E-4 40 1.303886363695631E-4 41 0.0011734977273260682 42 0.0059978772729999035 43 0.005085156818412962 44 0.0041724363638260195 45 0.002607772727391262 46 0.002868550000130389 47 0.0010431090909565049 48 0.005215545454782524 49 0.005476322727521651 50 0.002216606818282573 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 766938.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.160632871660745 #Duplication Level Percentage of deduplicated Percentage of total 1 77.63205822158791 48.25657870183519 2 13.529564144888596 16.820125394480094 3 4.025921152527764 7.507614201975951 4 1.6490636146603157 4.100273517316548 5 0.8797305976408688 2.734230535296037 6 0.5338728344663176 1.9911523958048207 7 0.35365832495829813 1.538853770981749 8 0.25401106588664646 1.263159088953525 9 0.18833394057494407 1.0536261243617042 >10 0.8771713501818872 9.428213139056165 >50 0.048755432786798704 2.038145403457693 >100 0.027015098028926734 2.973892112268938 >500 8.442218106805322E-4 0.29413561421156276 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.607772727391262E-4 2 0.0 0.0 0.0 0.0 2.607772727391262E-4 3 0.0 0.0 0.0 0.0 2.607772727391262E-4 4 0.0 0.0 0.0 0.0 2.607772727391262E-4 5 0.0 0.0 0.0 0.0 2.607772727391262E-4 6 0.0 0.0 0.0 0.0 3.911659091086894E-4 7 0.0 0.0 0.0 0.0 3.911659091086894E-4 8 0.0 0.0 0.0 0.0 3.911659091086894E-4 9 0.0 0.0 0.0 0.0 3.911659091086894E-4 10 0.0 0.0 0.0 0.0 3.911659091086894E-4 11 0.0 0.0 0.0 0.0 3.911659091086894E-4 12 0.0 0.0 0.0 0.0 0.0014342750000651944 13 0.0 0.0 0.0 0.0 0.0016950522728043206 14 0.0 0.0 0.0 1.303886363695631E-4 0.0016950522728043206 15 0.0 0.0 0.0 1.303886363695631E-4 0.001955829545543447 16 0.0 0.0 0.0 2.607772727391262E-4 0.001955829545543447 17 0.0 0.0 0.0 2.607772727391262E-4 0.001955829545543447 18 0.0 0.0 0.0 2.607772727391262E-4 0.0020862181819130098 19 0.0 0.0 0.0 3.911659091086894E-4 0.0020862181819130098 20 0.0 0.0 0.0 5.215545454782524E-4 0.002216606818282573 21 0.0 0.0 0.0 6.519431818478155E-4 0.002346995454652136 22 0.0 0.0 0.0 7.823318182173788E-4 0.0024773840910216993 23 0.0 0.0 0.0 9.127204545869419E-4 0.0024773840910216993 24 0.0 0.0 0.0 0.0014342750000651944 0.0024773840910216993 25 0.0 0.0 0.0 0.0020862181819130098 0.0024773840910216993 26 0.0 0.0 0.0 0.0027381613637608255 0.0024773840910216993 27 0.0 0.0 0.0 0.0036508818183477675 0.002868550000130389 28 0.0 0.0 0.0 0.0045636022729347095 0.002868550000130389 29 0.0 0.0 0.0 0.005737100000260778 0.002868550000130389 30 0.0 0.0 0.0 0.009909536364086797 0.002868550000130389 31 0.0 0.0 0.0 0.013299640909695438 0.002868550000130389 32 0.0 0.0 0.0 0.019036740909956214 0.0029989386364999517 33 0.0 0.0 0.0 0.02307878863741267 0.0029989386364999517 34 0.0 0.0 0.0 0.02803355681945607 0.0033901045456086413 35 0.0 0.0 0.0 0.033379490910608156 0.0033901045456086413 36 0.0 0.0 0.0 0.04081164318367326 0.0033901045456086413 37 0.0 0.0 0.0 0.05189467727508612 0.0033901045456086413 38 0.0 0.0 0.0 0.0657158727302598 0.0037812704547173304 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 415 0.0 31.282299 1 GTATCAA 900 0.0 24.692987 1 CGACGGT 110 5.2514224E-9 21.997913 7 CTATACC 70 3.2157302E-5 21.997913 4 TTTGCGC 80 3.6156653E-6 21.997913 17 GACGGTA 115 8.767529E-9 21.041483 8 GTGTAGG 160 1.8189894E-12 20.628424 1 CCTATAC 75 5.473287E-5 20.531385 3 GTTATAT 65 4.9243856E-4 20.311064 1 ACGACGG 120 1.430999E-8 20.164755 6 ACGGTAT 120 1.430999E-8 20.164755 9 GTATTAC 55 0.0044778395 20.003319 1 CTCGATT 90 1.001433E-5 19.554976 25 TACGACG 125 2.2871973E-8 19.358164 5 TTAGGAC 70 8.1248034E-4 18.855354 3 GTATATA 95 1.5935884E-5 18.52939 1 CAACTAG 60 0.0074026 18.336378 1 CTAGAAC 120 3.1613672E-7 18.331596 3 TTATACC 85 1.4310077E-4 18.115929 3 ATTTGCG 85 1.4310077E-4 18.115929 16 >>END_MODULE