##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062055_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2489428 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30385494177779 32.0 32.0 32.0 32.0 32.0 2 31.46041178937491 32.0 32.0 32.0 32.0 32.0 3 31.584423008016298 32.0 32.0 32.0 32.0 32.0 4 31.65532885466059 32.0 32.0 32.0 32.0 32.0 5 31.63731025761741 32.0 32.0 32.0 32.0 32.0 6 35.28674619229799 36.0 36.0 36.0 36.0 36.0 7 35.2858576347659 36.0 36.0 36.0 36.0 36.0 8 35.23820371587369 36.0 36.0 36.0 36.0 36.0 9 35.321467823130455 36.0 36.0 36.0 36.0 36.0 10 35.20915848942006 36.0 36.0 36.0 36.0 36.0 11 35.323093096084726 36.0 36.0 36.0 36.0 36.0 12 35.24696878158356 36.0 36.0 36.0 36.0 36.0 13 35.28146465774467 36.0 36.0 36.0 36.0 36.0 14 35.24834700983519 36.0 36.0 36.0 36.0 36.0 15 35.22494444506931 36.0 36.0 36.0 36.0 36.0 16 35.240169629328506 36.0 36.0 36.0 36.0 36.0 17 35.21758211123198 36.0 36.0 36.0 36.0 36.0 18 35.21774801279651 36.0 36.0 36.0 36.0 36.0 19 35.20693990748075 36.0 36.0 36.0 36.0 36.0 20 35.203253518478945 36.0 36.0 36.0 36.0 36.0 21 35.19902885321447 36.0 36.0 36.0 36.0 36.0 22 35.17998552277873 36.0 36.0 36.0 36.0 36.0 23 35.149756891944655 36.0 36.0 36.0 36.0 36.0 24 35.13676796436772 36.0 36.0 36.0 36.0 36.0 25 35.120440117167476 36.0 36.0 36.0 36.0 36.0 26 35.07838507480433 36.0 36.0 36.0 36.0 36.0 27 35.0653266533517 36.0 36.0 36.0 36.0 36.0 28 35.04380765380642 36.0 36.0 36.0 36.0 36.0 29 35.02364358398797 36.0 36.0 36.0 36.0 36.0 30 35.000872489583955 36.0 36.0 36.0 36.0 36.0 31 35.0044938033958 36.0 36.0 36.0 36.0 36.0 32 34.984152182750414 36.0 36.0 36.0 36.0 36.0 33 34.9662565055105 36.0 36.0 36.0 36.0 36.0 34 34.95803373305032 36.0 36.0 36.0 36.0 36.0 35 34.94391603211661 36.0 36.0 36.0 36.0 36.0 36 34.9173677648038 36.0 36.0 36.0 36.0 36.0 37 34.90099573074618 36.0 36.0 36.0 36.0 36.0 38 34.885075607729966 36.0 36.0 36.0 32.0 36.0 39 34.85673576419965 36.0 36.0 36.0 32.0 36.0 40 34.855025732818945 36.0 36.0 36.0 32.0 36.0 41 34.829478096976494 36.0 36.0 36.0 32.0 36.0 42 34.803182899846874 36.0 36.0 36.0 32.0 36.0 43 34.80462700668588 36.0 36.0 36.0 32.0 36.0 44 34.746121599017926 36.0 36.0 36.0 32.0 36.0 45 34.73385171212021 36.0 36.0 36.0 32.0 36.0 46 34.7033294395339 36.0 36.0 36.0 32.0 36.0 47 34.69081491812577 36.0 36.0 36.0 32.0 36.0 48 34.65770530419036 36.0 36.0 36.0 32.0 36.0 49 34.63992411108094 36.0 36.0 36.0 32.0 36.0 50 34.24247618328387 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 2.0 20 22.0 21 67.0 22 135.0 23 398.0 24 1043.0 25 2454.0 26 5366.0 27 10221.0 28 18148.0 29 29245.0 30 44540.0 31 67153.0 32 102568.0 33 175926.0 34 402139.0 35 1630001.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.129585890593596 17.51524712436301 11.853097201472595 26.502069783570796 2 15.872327211534484 19.761330590394653 37.75786857435079 26.608473623720073 3 18.89574411419835 23.22735027353728 28.329817793119126 29.54708781914524 4 12.52392115779207 15.758399118191004 35.55933330869581 36.158346415321105 5 14.424403688077616 36.837191851779544 33.52257366855907 15.215830791583764 6 35.137847148577336 35.2126837372822 16.302767226474877 13.34670188766558 7 30.740435152171504 29.966642939663245 20.212112983384134 19.080808924781113 8 27.80028183181036 34.151620372230084 18.85336711887229 19.194730677087264 9 26.959727294784187 14.310998349821727 18.358032447614473 40.37124190777962 10 15.824203722382702 27.137771061372757 31.666283044250743 25.371742171993795 11 37.55818605719868 21.04451303672972 22.168586518670153 19.228714387401443 12 24.444410523220593 23.423412928592434 29.131712184485753 23.00046436370122 13 29.5921392384114 19.60402148606025 25.060134295910547 25.74370497961781 14 23.148209146840156 19.740157176668696 25.073591202477036 32.03804247401411 15 24.882061260659075 27.815546382542493 22.047353849960714 25.255038506837714 16 25.479651034339806 25.941526801086525 24.128650357071983 24.450171807501686 17 23.84073771163496 26.391926177419066 25.303403030736376 24.46393308020959 18 24.468692782994957 25.531307217005043 26.406970924221085 23.593029075778915 19 25.600238769901175 24.97403015795609 25.142422389739643 24.283308682403092 20 25.67597966437216 24.891420665985382 24.991925843086594 24.440673826555862 21 26.168311020969888 24.560310465018656 24.622131920317404 24.649246593694052 22 25.699277103013223 24.879329709475428 25.098697371444363 24.322695816066982 23 24.311658867683207 24.886690792700488 25.54447268387464 25.257177655741664 24 24.806740890590678 25.02020563958281 25.559692199418016 24.6133612704085 25 24.840173550535287 24.813500660194208 25.5922767521257 24.754049037144814 26 24.256864754386463 25.84169237882413 25.786980817612466 24.114462049176936 27 24.8026650363016 25.210470542961378 25.3540781755765 24.632786245160524 28 24.405244191030466 25.23729775611065 25.479124746975458 24.878333305883427 29 24.411046133748744 25.116794554863116 25.383604334192704 25.088554977195436 30 24.288682305814184 25.458685929185982 25.62575470174669 24.626877063253144 31 25.029143404833427 24.97780602181879 25.14109746309774 24.851953110250044 32 24.89974520036298 25.148720157049446 25.010534637365446 24.94100000522213 33 24.382004147154074 24.97768554738497 25.50531891389875 25.134991391562206 34 24.985347939733536 25.26240142748626 25.57010473561818 24.18214589716202 35 25.14095652802661 25.09592595865704 25.67855163050028 24.08456588281608 36 24.138032152067552 25.61841714134216 25.409051104273285 24.834499602317006 37 25.074857696062086 25.269724711676357 25.155921731829885 24.499495860431672 38 24.586772543732938 25.18956161817092 25.285045399987467 24.938620438108675 39 25.289887965421524 24.852595594940166 24.982425554649495 24.87509088498881 40 25.59135189158291 25.03572112895237 25.290960997789448 24.08196598167527 41 24.586486703623365 25.263195950831523 25.890977745641518 24.25933959990359 42 25.456061029082417 25.599554895844424 25.241021088215387 23.70336298685778 43 24.7852731162062 24.963755234852822 25.611722053167025 24.639249595773954 44 24.321541625825528 25.53335850754423 25.171331930004982 24.97376793662526 45 24.447080534607654 25.652603040841143 25.276484839379492 24.62383158517171 46 24.440029228266898 25.194597350093655 25.137032607835476 25.228340813803968 47 24.858400069414095 25.153610818315038 25.537276332364968 24.450712779905906 48 25.20749617466275 25.593544911608497 24.61327838934522 24.585680524383537 49 24.788518411692728 25.57085366333754 24.738223996542057 24.90240392842767 50 24.833753385389258 25.831514268245755 24.731317994001706 24.603414352363284 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 112.0 1 79.0 2 46.0 3 135.0 4 224.0 5 263.0 6 302.0 7 251.0 8 200.0 9 306.0 10 412.0 11 630.5 12 849.0 13 1561.0 14 2273.0 15 3001.0 16 3729.0 17 3728.5 18 3728.0 19 3937.0 20 4146.0 21 5030.5 22 5915.0 23 7387.0 24 8859.0 25 11615.0 26 14371.0 27 19660.0 28 24949.0 29 29805.5 30 34662.0 31 40354.0 32 46046.0 33 53810.0 34 61574.0 35 71338.0 36 81102.0 37 91122.5 38 101143.0 39 107440.5 40 113738.0 41 120961.0 42 128184.0 43 133087.5 44 137991.0 45 149609.0 46 161227.0 47 169984.0 48 178741.0 49 185411.5 50 192082.0 51 189134.0 52 186186.0 53 184737.0 54 183288.0 55 182052.5 56 180817.0 57 173958.0 58 167099.0 59 152453.5 60 137808.0 61 120708.0 62 103608.0 63 88205.0 64 72802.0 65 61441.5 66 50081.0 67 42450.5 68 34820.0 69 30530.0 70 26240.0 71 20269.0 72 14298.0 73 12416.0 74 10534.0 75 7733.0 76 4932.0 77 4395.5 78 3859.0 79 3319.5 80 2780.0 81 2184.0 82 1588.0 83 1306.0 84 1024.0 85 835.0 86 646.0 87 437.0 88 228.0 89 154.0 90 80.0 91 61.0 92 42.0 93 33.0 94 24.0 95 22.0 96 20.0 97 14.5 98 9.0 99 9.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030609441204967565 2 0.005101573534161261 3 2.0084935173863232E-4 4 0.0 5 4.016987034772647E-5 6 1.6067948139090587E-4 7 0.0 8 0.0 9 0.0 10 4.016987034772647E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 5.623781848681706E-4 17 0.0 18 8.033974069545293E-5 19 8.033974069545293E-5 20 1.6067948139090587E-4 21 4.016987034772647E-5 22 0.0 23 4.016987034772647E-5 24 9.640768883454351E-4 25 3.615288331295382E-4 26 3.615288331295382E-4 27 2.4101922208635877E-4 28 0.0018076441656476908 29 5.623781848681706E-4 30 0.0013657755918226998 31 5.623781848681706E-4 32 8.435672773022557E-4 33 4.0169870347726464E-4 34 6.828877959113499E-4 35 3.2135896278181174E-4 36 3.2135896278181174E-4 37 0.0015264550732136059 38 0.0 39 7.230576662590764E-4 40 2.0084935173863232E-4 41 0.0011247563697363411 42 0.004940894052770355 43 0.004137496645815826 44 0.004338345997554459 45 0.0020486633877340498 46 0.0022896826098204085 47 8.033974069545293E-4 48 0.0042178363865112796 49 0.003454608849904476 50 0.0021691729987772294 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2489428.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.41631358487153 #Duplication Level Percentage of deduplicated Percentage of total 1 68.84664166067259 33.33300591908405 2 16.62960030290407 16.102878861129565 3 6.27256572652025 9.110835275907661 4 2.9231329707724503 5.661092902527843 5 1.5769185544344058 3.8174291614649247 6 0.9346041667631657 2.715005304943981 7 0.5709292412799847 1.9349602426409165 8 0.4108917995975736 1.591509297501465 9 0.30510681927111344 1.3294932694841661 >10 1.3861896560317284 11.584151224373015 >50 0.07556954598887768 2.5363856519488404 >100 0.05667780893498021 5.470944165625954 >500 0.008087010764096564 2.624187440046737 >1k 0.003084736064652974 2.1881212833207773 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2664 0.1070125346063433 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.033974069545293E-5 2 0.0 0.0 0.0 0.0 8.033974069545293E-5 3 0.0 0.0 0.0 0.0 8.033974069545293E-5 4 0.0 0.0 0.0 0.0 8.033974069545293E-5 5 0.0 0.0 0.0 0.0 8.033974069545293E-5 6 0.0 0.0 0.0 0.0 1.205096110431794E-4 7 0.0 0.0 0.0 0.0 1.205096110431794E-4 8 0.0 0.0 0.0 0.0 1.205096110431794E-4 9 0.0 0.0 0.0 0.0 1.205096110431794E-4 10 0.0 0.0 0.0 0.0 1.205096110431794E-4 11 0.0 0.0 0.0 0.0 1.205096110431794E-4 12 0.0 0.0 0.0 0.0 2.410192220863588E-4 13 0.0 0.0 0.0 0.0 3.2135896278181174E-4 14 0.0 0.0 0.0 0.0 3.2135896278181174E-4 15 0.0 0.0 0.0 0.0 4.820384441727176E-4 16 0.0 0.0 0.0 0.0 4.820384441727176E-4 17 0.0 0.0 0.0 0.0 4.820384441727176E-4 18 0.0 0.0 0.0 0.0 4.820384441727176E-4 19 0.0 0.0 0.0 0.0 5.22208314520444E-4 20 0.0 0.0 0.0 0.0 6.828877959113499E-4 21 0.0 0.0 0.0 0.0 7.632275366068028E-4 22 0.0 0.0 0.0 0.0 8.033974069545293E-4 23 0.0 0.0 0.0 0.0 8.033974069545293E-4 24 0.0 0.0 0.0 0.0 8.033974069545293E-4 25 0.0 0.0 0.0 4.016987034772647E-5 8.033974069545293E-4 26 0.0 0.0 0.0 4.016987034772647E-5 9.640768883454352E-4 27 0.0 0.0 0.0 4.016987034772647E-5 0.0010042467586931616 28 0.0 0.0 0.0 8.033974069545293E-5 0.0010042467586931616 29 0.0 0.0 0.0 1.205096110431794E-4 0.0010042467586931616 30 0.0 0.0 0.0 4.0169870347726464E-4 0.0010042467586931616 31 0.0 0.0 0.0 0.0015264550732136057 0.001044416629040888 32 0.0 0.0 0.0 0.002691381313297673 0.001044416629040888 33 0.0 0.0 0.0 0.004217836386511279 0.001044416629040888 34 0.0 0.0 0.0 0.00534259275624762 0.0010845864993886147 35 0.0 0.0 0.0 0.007310916403286217 0.0010845864993886147 36 0.0 0.0 0.0 0.009841618235192985 0.0010845864993886147 37 0.0 0.0 0.0 0.013577416177531545 0.0010845864993886147 38 0.0 0.0 0.0 0.019281537766908705 0.0011247563697363411 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2680 0.0 27.838879 1 GGTATCA 1115 0.0 22.107012 1 GTCCTAC 1155 0.0 21.150852 1 TAGGACG 910 0.0 19.3402 4 TCAACGC 3875 0.0 18.96213 4 ATCAACG 3935 0.0 18.673 3 AACGCAG 3970 0.0 18.619205 6 CGTCGTA 745 0.0 18.30829 10 CAACGCA 4015 0.0 18.300936 5 ATTTCGT 505 0.0 18.297697 42 ATACCGT 750 0.0 18.186234 6 AACCGCT 170 1.2732926E-10 18.117218 7 TCCTACA 1510 0.0 18.06725 2 ACCGTCG 740 0.0 17.837416 8 GTAGGAC 1350 0.0 17.762543 3 TACCGTC 760 0.0 17.657475 7 CCGTCGT 740 0.0 17.540125 9 TACGCTC 115 4.2775246E-6 17.216984 34 TATCAAC 4350 0.0 17.09522 2 GTCCTAA 645 0.0 17.06071 1 >>END_MODULE