##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062054_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2822876 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.2926494114513 32.0 32.0 32.0 32.0 32.0 2 31.46653235919679 32.0 32.0 32.0 32.0 32.0 3 31.584581469395044 32.0 32.0 32.0 32.0 32.0 4 31.664525469769128 32.0 32.0 32.0 32.0 32.0 5 31.634366511316827 32.0 32.0 32.0 32.0 32.0 6 35.29335401200761 36.0 36.0 36.0 36.0 36.0 7 35.29606330564998 36.0 36.0 36.0 36.0 36.0 8 35.24766939815989 36.0 36.0 36.0 36.0 36.0 9 35.33395728328131 36.0 36.0 36.0 36.0 36.0 10 35.21383829824619 36.0 36.0 36.0 36.0 36.0 11 35.32769133323603 36.0 36.0 36.0 36.0 36.0 12 35.25375184740669 36.0 36.0 36.0 36.0 36.0 13 35.288207487682776 36.0 36.0 36.0 36.0 36.0 14 35.25346809424148 36.0 36.0 36.0 36.0 36.0 15 35.22998176327972 36.0 36.0 36.0 36.0 36.0 16 35.2403732930529 36.0 36.0 36.0 36.0 36.0 17 35.22708046687138 36.0 36.0 36.0 36.0 36.0 18 35.22211779759366 36.0 36.0 36.0 36.0 36.0 19 35.214753676746696 36.0 36.0 36.0 36.0 36.0 20 35.21730851797953 36.0 36.0 36.0 36.0 36.0 21 35.20702007456225 36.0 36.0 36.0 36.0 36.0 22 35.1912538843364 36.0 36.0 36.0 36.0 36.0 23 35.16209992929197 36.0 36.0 36.0 36.0 36.0 24 35.1440240378961 36.0 36.0 36.0 36.0 36.0 25 35.12692764400562 36.0 36.0 36.0 36.0 36.0 26 35.09140925779241 36.0 36.0 36.0 36.0 36.0 27 35.079399165956985 36.0 36.0 36.0 36.0 36.0 28 35.06035475876376 36.0 36.0 36.0 36.0 36.0 29 35.04185872847408 36.0 36.0 36.0 36.0 36.0 30 35.02029242517206 36.0 36.0 36.0 36.0 36.0 31 35.02561430257652 36.0 36.0 36.0 36.0 36.0 32 35.003860955989566 36.0 36.0 36.0 36.0 36.0 33 34.981999563565665 36.0 36.0 36.0 36.0 36.0 34 34.971211275309294 36.0 36.0 36.0 36.0 36.0 35 34.958780336082775 36.0 36.0 36.0 36.0 36.0 36 34.938470198478434 36.0 36.0 36.0 36.0 36.0 37 34.92421487872652 36.0 36.0 36.0 36.0 36.0 38 34.91372876456494 36.0 36.0 36.0 36.0 36.0 39 34.89928852701996 36.0 36.0 36.0 36.0 36.0 40 34.877701677296486 36.0 36.0 36.0 32.0 36.0 41 34.849074489988226 36.0 36.0 36.0 32.0 36.0 42 34.82769593846843 36.0 36.0 36.0 32.0 36.0 43 34.816767721996996 36.0 36.0 36.0 32.0 36.0 44 34.78290013447278 36.0 36.0 36.0 32.0 36.0 45 34.76164450723305 36.0 36.0 36.0 32.0 36.0 46 34.74284276036213 36.0 36.0 36.0 32.0 36.0 47 34.722571590108814 36.0 36.0 36.0 32.0 36.0 48 34.69865732678304 36.0 36.0 36.0 32.0 36.0 49 34.683000953637354 36.0 36.0 36.0 32.0 36.0 50 34.268370626269096 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 5.0 20 26.0 21 64.0 22 171.0 23 499.0 24 1303.0 25 2995.0 26 6323.0 27 11939.0 28 20344.0 29 32890.0 30 49739.0 31 73268.0 32 112571.0 33 192531.0 34 448423.0 35 1869785.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.107123430291416 17.74551629534423 11.81424416740109 26.333116106963256 2 16.45378091124196 19.67705605836075 36.733801699708685 27.1353613306886 3 18.904036603907798 22.845878730425937 28.240569520076747 30.00951514558952 4 12.916259871138514 15.580138837129226 34.855268173309774 36.648333118422485 5 14.970016394627322 36.28721204898834 32.91696128345701 15.825810272927326 6 35.47141511502643 34.36736261248735 16.23941282516075 13.921809447325472 7 31.202539537691347 29.877295354099857 19.792651182694527 19.127513925514265 8 28.575254456802213 33.04973367586816 18.649774201913228 19.725237665416408 9 26.980356204098232 14.512752242748176 18.587886963508137 39.91900458964545 10 16.798240657656223 26.459036591444246 30.586569073422716 26.156153677476812 11 37.4266173930417 21.206705501764866 21.661631612582344 19.70504549261108 12 24.56941077114262 23.506098036187208 28.214381361420056 23.710109831250115 13 29.534524364513352 19.19992234869686 25.034503818091903 26.231049468697883 14 23.640464547504035 19.27998254262674 24.84544131587785 32.23411159399138 15 25.37245702609679 26.85512930784066 21.83595737113497 25.936456294927584 16 26.031543939896334 25.826078269667313 23.187048861153382 24.955328929282967 17 24.331213981768947 26.005782754892525 24.70923271160334 24.95377055173518 18 25.066129436216222 25.093583735435494 25.511137057883936 24.329149770464344 19 25.698436629876763 24.927662426546544 25.114811986073775 24.259088957502918 20 25.85551169163887 24.33135473376051 24.77593741409458 25.037196160506035 21 26.626542089182127 24.18396138688394 24.489890625691892 24.69960589824204 22 26.029127740644647 24.103609226901927 24.923517717391768 24.943745315061662 23 24.695824184855578 24.2270466198633 25.388593327226083 25.68853586805504 24 24.772020861215953 24.78615553239532 25.23853586061726 25.20328774577147 25 25.0592216642005 24.2138051748062 25.22536469102888 25.50160846996442 26 24.70253614768547 25.070708330263162 25.519826672485816 24.70692884956555 27 25.33560761850106 24.70723892215887 24.882521835085985 25.074631624254085 28 24.951210292936622 24.5226331456847 25.401113563733404 25.12504299764527 29 24.798378383357033 24.825088863713493 25.365922953371438 25.010609799558036 30 24.902766328508285 24.77941533328681 25.493341986560335 24.824476351644567 31 25.338317391503036 24.643846132318668 24.72755535418424 25.290281121994056 32 25.26658332303051 24.63658195207611 24.695883700556635 25.40095102433674 33 24.75452253135643 24.477003159200613 25.180685161817813 25.587789147625145 34 25.417635099733992 24.583693340687578 25.273313332334347 24.725358227244083 35 25.75374610280966 24.381311623962446 25.25021547242573 24.614726800802163 36 24.595208211781554 24.934897839823357 25.09810047997234 25.371793468422748 37 25.673648770243823 24.61542222077372 24.910905203136135 24.80002380584632 38 24.905495284063235 24.49265376610725 25.310614178807068 25.29123677102245 39 25.511770744844032 24.576827783024648 24.700957827667537 25.21044364446378 40 25.674915476153366 24.647699222635673 24.961103443585113 24.716281857625848 41 24.704509940829368 25.11972816154437 25.36221333523212 24.813548562394143 42 25.737828155865355 24.95256388818823 24.935452878475697 24.374155077470718 43 25.362542949848184 24.233226310760816 25.109564402896588 25.294666336494416 44 24.88165014923258 24.80204763043459 24.945133777931293 25.371168442401537 45 25.136317583126093 24.94842037395229 24.883095627776477 25.03216641514514 46 24.94693250012399 24.77958212000765 24.99613861315989 25.27734676670847 47 25.124094707323536 24.75535311196793 25.179428973049873 24.94112320765866 48 25.633049285700622 25.226285140178106 24.35554346339725 24.78512211072402 49 25.077017038691316 25.199309043089862 24.56677030075614 25.15690361746267 50 25.173601885761776 25.25125423421394 24.563294103310216 25.011849776714072 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 143.0 1 110.5 2 78.0 3 250.0 4 422.0 5 437.5 6 453.0 7 377.5 8 302.0 9 427.0 10 552.0 11 960.0 12 1368.0 13 2397.0 14 3426.0 15 4357.0 16 5288.0 17 5446.5 18 5605.0 19 5561.5 20 5518.0 21 6570.5 22 7623.0 23 9048.5 24 10474.0 25 13472.0 26 16470.0 27 20568.5 28 24667.0 29 28592.0 30 32517.0 31 36618.0 32 40719.0 33 46983.0 34 53247.0 35 61943.0 36 70639.0 37 83585.0 38 96531.0 39 107225.0 40 117919.0 41 129014.5 42 140110.0 43 147291.0 44 154472.0 45 167253.0 46 180034.0 47 192639.5 48 205245.0 49 214101.5 50 222958.0 51 218868.0 52 214778.0 53 213511.0 54 212244.0 55 213716.5 56 215189.0 57 207996.5 58 200804.0 59 183856.0 60 166908.0 61 146766.5 62 126625.0 63 108968.0 64 91311.0 65 76860.5 66 62410.0 67 54104.5 68 45799.0 69 40325.0 70 34851.0 71 27361.5 72 19872.0 73 17173.5 74 14475.0 75 10821.5 76 7168.0 77 6223.0 78 5278.0 79 4507.5 80 3737.0 81 2916.0 82 2095.0 83 1721.5 84 1348.0 85 1031.5 86 715.0 87 484.0 88 253.0 89 172.5 90 92.0 91 67.0 92 42.0 93 37.5 94 33.0 95 30.0 96 27.0 97 28.0 98 29.0 99 21.0 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03312224837364447 2 0.005561703737606611 3 2.83398916565942E-4 4 0.0 5 0.0 6 1.0627459371222824E-4 7 0.0 8 0.0 9 0.0 10 1.0627459371222824E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.084972914148549E-4 17 0.0 18 1.0627459371222824E-4 19 0.0 20 1.41699458282971E-4 21 3.542486457074275E-5 22 0.0 23 7.08497291414855E-5 24 0.0010627459371222823 25 2.479740519951992E-4 26 4.25098374848913E-4 27 3.896735102781702E-4 28 0.0016649686348249092 29 4.959481039903984E-4 30 0.0013107199891174816 31 3.188237811366847E-4 32 8.856216142685687E-4 33 3.5424864570742746E-4 34 6.022226977026267E-4 35 3.188237811366847E-4 36 1.7712432285371373E-4 37 0.0014169945828297098 38 3.542486457074275E-5 39 0.0010627459371222823 40 1.41699458282971E-4 41 8.147718851270832E-4 42 0.004676082123338043 43 0.0037904605090694743 44 0.0035779113216450175 45 0.0019837924159615936 46 0.0019837924159615936 47 0.001133595666263768 48 0.0038967351027817017 49 0.004392683206772101 50 0.0013461448536882244 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2822876.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.77076520315113 #Duplication Level Percentage of deduplicated Percentage of total 1 74.7925619524635 38.72068163783122 2 14.808146577336117 15.332581590982281 3 4.480336507649791 6.958513481059303 4 1.9121964330194565 3.959834902246135 5 1.0239595476351908 2.6505584659073156 6 0.6327854382663767 1.9655871809077001 7 0.4181847002323634 1.5154819349095878 8 0.3030998697566839 1.2553369752223174 9 0.22446086443100832 1.045845963877866 >10 1.246634094625348 11.68489927526056 >50 0.08454214809606235 3.02137157209618 >100 0.06250311284674236 6.561632772403502 >500 0.007150846614990365 2.5793663550997983 >1k 0.0034379070263972408 2.748307892196266 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3034 0.10747903910763348 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0627459371222824E-4 2 0.0 0.0 0.0 0.0 1.0627459371222824E-4 3 0.0 0.0 0.0 0.0 1.0627459371222824E-4 4 0.0 0.0 0.0 0.0 1.0627459371222824E-4 5 0.0 7.08497291414855E-5 0.0 0.0 1.0627459371222824E-4 6 0.0 7.08497291414855E-5 0.0 0.0 1.0627459371222824E-4 7 0.0 7.08497291414855E-5 0.0 3.542486457074275E-5 1.0627459371222824E-4 8 0.0 7.08497291414855E-5 0.0 1.41699458282971E-4 1.7712432285371373E-4 9 0.0 7.08497291414855E-5 0.0 1.41699458282971E-4 2.125491874244565E-4 10 0.0 7.08497291414855E-5 0.0 1.41699458282971E-4 2.125491874244565E-4 11 0.0 7.08497291414855E-5 0.0 1.41699458282971E-4 2.125491874244565E-4 12 0.0 7.08497291414855E-5 0.0 1.41699458282971E-4 3.188237811366847E-4 13 0.0 7.08497291414855E-5 0.0 1.41699458282971E-4 3.896735102781702E-4 14 0.0 7.08497291414855E-5 0.0 1.41699458282971E-4 3.896735102781702E-4 15 0.0 7.08497291414855E-5 0.0 2.479740519951992E-4 5.313729685611412E-4 16 0.0 7.08497291414855E-5 0.0 3.188237811366847E-4 6.730724268441122E-4 17 0.0 7.08497291414855E-5 0.0 3.896735102781702E-4 7.084972914148549E-4 18 0.0 7.08497291414855E-5 0.0 4.959481039903984E-4 8.147718851270831E-4 19 0.0 7.08497291414855E-5 0.0 5.313729685611412E-4 8.147718851270831E-4 20 0.0 1.0627459371222824E-4 0.0 6.376475622733694E-4 8.50196749697826E-4 21 0.0 1.0627459371222824E-4 0.0 8.147718851270831E-4 8.50196749697826E-4 22 0.0 1.0627459371222824E-4 0.0 0.0010273210725515397 8.856216142685687E-4 23 0.0 1.0627459371222824E-4 0.0 0.0014524194474004526 8.856216142685687E-4 24 0.0 1.0627459371222824E-4 0.0 0.0017712432285371374 8.856216142685687E-4 25 0.0 1.0627459371222824E-4 0.0 0.002125491874244565 8.856216142685687E-4 26 0.0 1.0627459371222824E-4 0.0 0.0024443156553812496 9.918962079807968E-4 27 0.0 1.0627459371222824E-4 0.0 0.002798564301088677 9.918962079807968E-4 28 0.0 1.0627459371222824E-4 0.0 0.0035424864570742748 0.0010273210725515397 29 0.0 1.0627459371222824E-4 0.0 0.0051011804981869555 0.0010627459371222825 30 0.0 1.0627459371222824E-4 0.0 0.008360268038695289 0.0010627459371222825 31 0.0 1.0627459371222824E-4 0.0 0.013709422588877442 0.0010981708016930252 32 0.0 1.0627459371222824E-4 0.0 0.01973164956590371 0.0010981708016930252 33 0.0 1.0627459371222824E-4 0.0 0.025505902490934776 0.0010981708016930252 34 0.0 1.0627459371222824E-4 0.0 0.03393702025877155 0.0010981708016930252 35 0.0 1.0627459371222824E-4 0.0 0.04300578558888169 0.0010981708016930252 36 0.0 1.0627459371222824E-4 0.0 0.05458971630351457 0.0010981708016930252 37 0.0 1.0627459371222824E-4 0.0 0.06946815942322652 0.0010981708016930252 38 0.0 1.0627459371222824E-4 0.0 0.09015628033254029 0.0010981708016930252 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3480 0.0 25.4245 1 GGTATCA 1720 0.0 25.20829 1 CGGTACG 90 1.00292455E-5 19.555132 25 TGCGTTA 70 8.13012E-4 18.856064 12 GTATTAG 575 0.0 17.607414 1 TCAACGC 5160 0.0 16.882755 4 CGCAATA 600 0.0 16.500225 36 ATCAACG 5300 0.0 16.436796 3 CAACGCA 5320 0.0 16.416355 5 GTCCTAT 555 0.0 16.259098 1 AACGCAG 5385 0.0 16.259052 6 GGCGTTA 785 0.0 16.25673 42 TATCAAC 5495 0.0 16.054815 2 CGCGAAC 100 4.9487513E-4 15.399119 14 TAGATCG 100 4.9487513E-4 15.399119 5 ACTCGTA 115 8.2277504E-5 15.3034725 11 GCGTTAT 835 0.0 15.283 43 ATACGAA 635 0.0 15.245924 40 CTAGCGG 640 0.0 15.124939 29 CAATACG 670 0.0 15.106022 38 >>END_MODULE