##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062053_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1297488 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.320806820564044 32.0 32.0 32.0 32.0 32.0 2 31.48295398493088 32.0 32.0 32.0 32.0 32.0 3 31.59049178104152 32.0 32.0 32.0 32.0 32.0 4 31.66662581850468 32.0 32.0 32.0 32.0 32.0 5 31.643549689862258 32.0 32.0 32.0 32.0 32.0 6 35.29235260750003 36.0 36.0 36.0 36.0 36.0 7 35.303824004538 36.0 36.0 36.0 36.0 36.0 8 35.25404242659663 36.0 36.0 36.0 36.0 36.0 9 35.33718076776047 36.0 36.0 36.0 36.0 36.0 10 35.223371622704796 36.0 36.0 36.0 36.0 36.0 11 35.33619887043271 36.0 36.0 36.0 36.0 36.0 12 35.25914228108468 36.0 36.0 36.0 36.0 36.0 13 35.29179845979308 36.0 36.0 36.0 36.0 36.0 14 35.26141436375519 36.0 36.0 36.0 36.0 36.0 15 35.24033054640968 36.0 36.0 36.0 36.0 36.0 16 35.249105194036474 36.0 36.0 36.0 36.0 36.0 17 35.2349671056688 36.0 36.0 36.0 36.0 36.0 18 35.228813676889494 36.0 36.0 36.0 36.0 36.0 19 35.2239226875316 36.0 36.0 36.0 36.0 36.0 20 35.22045213520279 36.0 36.0 36.0 36.0 36.0 21 35.21788717891803 36.0 36.0 36.0 36.0 36.0 22 35.195968671771915 36.0 36.0 36.0 36.0 36.0 23 35.17140274129703 36.0 36.0 36.0 36.0 36.0 24 35.15410855437584 36.0 36.0 36.0 36.0 36.0 25 35.14073887388554 36.0 36.0 36.0 36.0 36.0 26 35.09662979542007 36.0 36.0 36.0 36.0 36.0 27 35.08794686347773 36.0 36.0 36.0 36.0 36.0 28 35.07227350079538 36.0 36.0 36.0 36.0 36.0 29 35.04928215135708 36.0 36.0 36.0 36.0 36.0 30 35.03028313171297 36.0 36.0 36.0 36.0 36.0 31 35.029185626379586 36.0 36.0 36.0 36.0 36.0 32 35.013534614578326 36.0 36.0 36.0 36.0 36.0 33 34.99848322296622 36.0 36.0 36.0 36.0 36.0 34 34.98733090402378 36.0 36.0 36.0 36.0 36.0 35 34.97060165489007 36.0 36.0 36.0 36.0 36.0 36 34.94643804027475 36.0 36.0 36.0 36.0 36.0 37 34.94277866153676 36.0 36.0 36.0 36.0 36.0 38 34.92667909067367 36.0 36.0 36.0 36.0 36.0 39 34.915995369514015 36.0 36.0 36.0 36.0 36.0 40 34.89837902161715 36.0 36.0 36.0 36.0 36.0 41 34.87725435610965 36.0 36.0 36.0 32.0 36.0 42 34.84642940821033 36.0 36.0 36.0 32.0 36.0 43 34.84924022418704 36.0 36.0 36.0 32.0 36.0 44 34.8141138877585 36.0 36.0 36.0 32.0 36.0 45 34.80047368453504 36.0 36.0 36.0 32.0 36.0 46 34.78043496356036 36.0 36.0 36.0 32.0 36.0 47 34.760175045934915 36.0 36.0 36.0 32.0 36.0 48 34.73246688986719 36.0 36.0 36.0 32.0 36.0 49 34.728012898770544 36.0 36.0 36.0 32.0 36.0 50 34.31789966458264 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 2.0 20 14.0 21 23.0 22 75.0 23 208.0 24 612.0 25 1403.0 26 2797.0 27 5536.0 28 9519.0 29 14903.0 30 22503.0 31 33028.0 32 50618.0 33 86633.0 34 201111.0 35 868502.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.010784281223955 17.49207639045759 11.863557409644638 26.633581918673816 2 16.463006696345992 19.531394517135492 36.525915968873704 27.479682817644814 3 18.771084058775244 22.782228696285507 28.08063291675819 30.366054328181058 4 12.9579718332438 15.61896188555261 34.475875288153176 36.94719099305041 5 15.020177450581432 36.172357663423476 32.94411971440198 15.86334517159311 6 35.82282002924123 34.35528635057261 15.985797116416938 13.836096503769221 7 31.241445007583884 29.82239527456131 19.802726499204617 19.133433218650193 8 28.6331742567176 33.031288150641856 18.462136065998298 19.87340152664225 9 27.022677666383043 14.39689615626503 18.182056404375224 40.39836977297671 10 16.364402880337146 27.00951917051963 30.826436025948624 25.799641923194606 11 37.68512695300458 21.18293194233781 21.369754479424856 19.762186625232758 12 24.684621360659982 23.291467820896994 28.278951327488194 23.744959490954827 13 29.82470743467377 19.358868829615382 24.512982008311447 26.303441727399406 14 23.580256618943682 19.08996460853588 24.790595365814557 32.53918340670588 15 25.31954052754245 26.952542142971648 21.590719914172617 26.137197415313285 16 26.240652093322225 25.697677734505962 22.965772961957885 25.09589721021393 17 24.592520316180188 25.85233928945778 24.615564845301073 24.939575549060955 18 25.129731550296842 25.103218760573327 25.328731617349536 24.438318071780294 19 25.868832698260025 24.818880791190363 24.74281072349031 24.569475787059304 20 25.891648760215922 24.494251952239875 24.424964007263288 25.18913528028091 21 26.550863322715372 24.185290488459614 24.3715736650926 24.892272523732416 22 25.99183961624308 24.201611113166365 24.69502608116607 25.11152318942449 23 24.959768414043136 24.290937565511204 25.045472482211785 25.70382153823388 24 25.1569588292328 24.699531551306617 24.819919320155932 25.323590299304648 25 25.205281598414164 24.339607517923124 24.874025615690652 25.581085267972064 26 25.13740085596629 25.13778621806408 24.944180300135415 24.780632625834212 27 25.49728975254396 24.831076784821075 24.441322159904985 25.23031130272998 28 25.17220038058654 24.63839268854564 24.908687747163523 25.2807191837043 29 25.03317975333686 24.92003717982116 24.927744439597436 25.119038627244546 30 25.228366459186912 24.659261520058944 24.985510329285475 25.126861691468665 31 25.387481290684573 24.690361793073045 24.494675070636816 25.427481845605566 32 25.374476772998673 24.66779757945613 24.241508712678527 25.71621693486667 33 24.977880266731614 24.548587882393925 24.879381942282137 25.59414990859232 34 25.662380662808417 24.60533079918827 24.661131316961583 25.07115722104173 35 25.787370017664955 24.41047442588887 24.969633536906812 24.832522019539354 36 25.03325662088069 24.879728952759415 24.612057471140343 25.474956955219557 37 25.68142388207176 24.685637476714245 24.494187520761606 25.13875112045239 38 25.20108085778057 24.565622186871863 24.733870371055456 25.499426584292106 39 25.616907865175463 24.700746601679104 24.300431837432438 25.381913695712992 40 25.808293885251942 24.5897065556006 24.817377605615786 24.784621953531676 41 25.069962920230328 24.90109620778236 24.967995480445452 25.060945391541868 42 25.91311988407763 24.72306577669529 24.47711612276672 24.88669821646036 43 25.422605339178745 24.34855729951874 24.676051387822675 25.552785973479843 44 25.11152697149164 24.75313000021581 24.68676875456667 25.448574273725878 45 25.321765027326613 24.90217372035827 24.62840657811882 25.14765467419629 46 25.308411704769497 24.792478191905072 24.577056296408195 25.32205380691724 47 25.407637597920885 24.738492272689435 24.76724039596879 25.08662973342089 48 25.693402865022097 25.160739362530272 24.149133448739903 24.996724323707724 49 25.235792159144776 24.972734664935047 24.330698647716456 25.46077452820372 50 25.230949463186047 25.12489691476489 24.568352254772748 25.075801367276313 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 7.0 1 21.5 2 36.0 3 96.0 4 156.0 5 169.5 6 183.0 7 153.5 8 124.0 9 170.5 10 217.0 11 374.5 12 532.0 13 912.5 14 1293.0 15 1686.0 16 2079.0 17 2087.5 18 2096.0 19 2162.5 20 2229.0 21 2755.5 22 3282.0 23 4154.5 24 5027.0 25 6383.5 26 7740.0 27 9281.0 28 10822.0 29 12742.5 30 14663.0 31 16509.0 32 18355.0 33 21194.0 34 24033.0 35 28175.0 36 32317.0 37 36690.5 38 41064.0 39 45424.5 40 49785.0 41 55100.0 42 60415.0 43 63279.0 44 66143.0 45 73968.5 46 81794.0 47 88053.0 48 94312.0 49 98453.0 50 102594.0 51 102239.0 52 101884.0 53 102184.0 54 102484.0 55 101325.0 56 100166.0 57 96902.5 58 93639.0 59 85926.0 60 78213.0 61 69784.5 62 61356.0 63 53247.0 64 45138.0 65 38525.0 66 31912.0 67 26995.5 68 22079.0 69 18985.5 70 15892.0 71 12444.5 72 8997.0 73 7644.0 74 6291.0 75 4619.5 76 2948.0 77 2591.5 78 2235.0 79 1808.0 80 1381.0 81 1077.0 82 773.0 83 606.5 84 440.0 85 331.5 86 223.0 87 147.5 88 72.0 89 49.5 90 27.0 91 19.0 92 11.0 93 9.5 94 8.0 95 8.5 96 9.0 97 8.5 98 8.0 99 6.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03198488155574464 2 0.004932608239922065 3 2.3121601124634678E-4 4 7.707200374878226E-5 5 0.0 6 3.853600187439113E-4 7 0.0 8 0.0 9 0.0 10 7.707200374878226E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.853600187439113E-4 17 0.0 18 7.707200374878226E-5 19 0.0 20 3.0828801499512904E-4 21 7.707200374878226E-5 22 0.0 23 0.0 24 0.0010790080524829518 25 1.5414400749756452E-4 26 5.395040262414759E-4 27 3.853600187439113E-4 28 0.0013102240637292983 29 7.707200374878227E-4 30 9.248640449853871E-4 31 4.6243202249269356E-4 32 8.477920412366049E-4 33 3.0828801499512904E-4 34 6.936480337390404E-4 35 3.0828801499512904E-4 36 1.5414400749756452E-4 37 0.0016185120787244277 38 0.0 39 6.936480337390404E-4 40 1.5414400749756452E-4 41 0.001156080056231734 42 0.005240896254917193 43 0.004624320224926936 44 0.0033911681649464198 45 0.002697520131207379 46 0.0026204481274585967 47 9.248640449853871E-4 48 0.003545312172443984 49 0.00408481619868546 50 0.0013872960674780807 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1297488.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.543385691895445 #Duplication Level Percentage of deduplicated Percentage of total 1 74.24427199206309 41.2377823466915 2 14.947107797831183 16.604259467865507 3 4.909773565626379 8.18116340446376 4 2.0906807358972266 4.644939458902217 5 1.0609610112668482 2.9464683326428984 6 0.63648452634604 2.1211503320256893 7 0.4024942212188235 1.564912423754134 8 0.2813271533170496 1.2500690065833509 9 0.21676641554252504 1.0835946561175334 >10 1.0829043975741544 10.813925634955767 >50 0.07429714367197936 2.8586263170422073 >100 0.04888092395330937 5.155642938326652 >500 0.0040501156911900895 1.5374656806287978 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.3121601124634678E-4 2 0.0 0.0 0.0 0.0 2.3121601124634678E-4 3 0.0 0.0 0.0 0.0 2.3121601124634678E-4 4 0.0 0.0 0.0 0.0 3.0828801499512904E-4 5 0.0 0.0 0.0 0.0 3.853600187439113E-4 6 0.0 0.0 0.0 0.0 4.6243202249269356E-4 7 0.0 0.0 0.0 0.0 4.6243202249269356E-4 8 0.0 0.0 0.0 0.0 4.6243202249269356E-4 9 0.0 0.0 0.0 0.0 4.6243202249269356E-4 10 0.0 0.0 0.0 0.0 5.395040262414758E-4 11 0.0 0.0 0.0 0.0 5.395040262414758E-4 12 0.0 0.0 0.0 0.0 0.001156080056231734 13 0.0 0.0 0.0 0.0 0.0013872960674780807 14 0.0 0.0 0.0 0.0 0.0013872960674780807 15 0.0 1.5414400749756452E-4 0.0 0.0 0.001772656086221992 16 0.0 1.5414400749756452E-4 0.0 0.0 0.001772656086221992 17 0.0 1.5414400749756452E-4 0.0 1.5414400749756452E-4 0.0019268000937195566 18 0.0 1.5414400749756452E-4 0.0 1.5414400749756452E-4 0.002003872097468339 19 0.0 2.3121601124634678E-4 0.0 1.5414400749756452E-4 0.002003872097468339 20 0.0 2.3121601124634678E-4 0.0 1.5414400749756452E-4 0.002158016104965903 21 0.0 2.3121601124634678E-4 0.0 1.5414400749756452E-4 0.002312160112463468 22 0.0 2.3121601124634678E-4 0.0 1.5414400749756452E-4 0.002312160112463468 23 0.0 2.3121601124634678E-4 0.0 3.0828801499512904E-4 0.002312160112463468 24 0.0 2.3121601124634678E-4 0.0 5.395040262414758E-4 0.002312160112463468 25 0.0 2.3121601124634678E-4 0.0 7.707200374878227E-4 0.002312160112463468 26 0.0 2.3121601124634678E-4 0.0 9.248640449853871E-4 0.0024663041199610323 27 0.0 2.3121601124634678E-4 0.0 0.0010790080524829516 0.0026975201312073793 28 0.0 2.3121601124634678E-4 0.0 0.0013102240637292986 0.0026975201312073793 29 0.0 2.3121601124634678E-4 0.0 0.001772656086221992 0.0026975201312073793 30 0.0 2.3121601124634678E-4 0.0 0.0026975201312073793 0.0026975201312073793 31 0.0 2.3121601124634678E-4 0.0 0.004701392228675718 0.0028516641387049436 32 0.0 2.3121601124634678E-4 0.0 0.006705264326144057 0.002928736142453726 33 0.0 2.3121601124634678E-4 0.0 0.008709136423612396 0.002928736142453726 34 0.0 2.3121601124634678E-4 0.0 0.010713008521080734 0.003237024157448855 35 0.0 2.3121601124634678E-4 0.0 0.013487600656036896 0.003237024157448855 36 0.0 2.3121601124634678E-4 0.0 0.018574352903456524 0.003237024157448855 37 0.0 2.3121601124634678E-4 0.0 0.02512547322210302 0.003314096161197637 38 0.0 2.3121601124634678E-4 0.0 0.03437411367195689 0.003468240168695202 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1240 0.0 28.579033 1 GGTATCA 545 0.0 26.655743 1 ATTATAC 135 0.0 24.443674 3 TTACACG 55 0.0044846046 19.999369 4 ATATTAT 105 1.7841958E-6 18.866728 1 GTATTAC 165 8.185452E-11 18.676153 1 GTATAGA 165 8.185452E-11 18.676153 1 CAACGCA 1905 0.0 18.477106 5 TCAACGC 1915 0.0 18.380623 4 ATCAACG 1920 0.0 18.332754 3 AACGCAG 1945 0.0 18.210224 6 CGAGCCG 345 0.0 17.85451 15 TATCAAC 2020 0.0 17.753967 2 GTCACGC 75 0.0012912123 17.599445 24 ATACCGC 370 0.0 17.242699 27 TACCGCA 385 0.0 17.142317 28 CGCGGAT 120 6.402144E-6 16.501387 42 ATTACAC 175 3.6270649E-9 16.342342 3 TATATAG 175 3.6270649E-9 16.342342 5 ATCACGA 230 1.8189894E-12 16.260357 34 >>END_MODULE