##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062052_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1029760 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.285689869484152 32.0 32.0 32.0 32.0 32.0 2 31.440270548477315 32.0 32.0 32.0 32.0 32.0 3 31.568839341205717 32.0 32.0 32.0 32.0 32.0 4 31.64426079863269 32.0 32.0 32.0 32.0 32.0 5 31.61072677128651 32.0 32.0 32.0 32.0 32.0 6 35.258604917650715 36.0 36.0 36.0 36.0 36.0 7 35.26256797700435 36.0 36.0 36.0 36.0 36.0 8 35.208970051274086 36.0 36.0 36.0 36.0 36.0 9 35.30040106432567 36.0 36.0 36.0 36.0 36.0 10 35.18200551584835 36.0 36.0 36.0 36.0 36.0 11 35.29525520509633 36.0 36.0 36.0 36.0 36.0 12 35.223865755127406 36.0 36.0 36.0 36.0 36.0 13 35.25686956183965 36.0 36.0 36.0 36.0 36.0 14 35.218088680857676 36.0 36.0 36.0 36.0 36.0 15 35.19709446861405 36.0 36.0 36.0 36.0 36.0 16 35.20771538999379 36.0 36.0 36.0 36.0 36.0 17 35.19026472187694 36.0 36.0 36.0 36.0 36.0 18 35.18475275792418 36.0 36.0 36.0 36.0 36.0 19 35.182874650403974 36.0 36.0 36.0 36.0 36.0 20 35.18045952454941 36.0 36.0 36.0 36.0 36.0 21 35.1748640459913 36.0 36.0 36.0 36.0 36.0 22 35.15298030609074 36.0 36.0 36.0 36.0 36.0 23 35.12065141392169 36.0 36.0 36.0 36.0 36.0 24 35.11473353014295 36.0 36.0 36.0 36.0 36.0 25 35.10369309353636 36.0 36.0 36.0 36.0 36.0 26 35.04910950124301 36.0 36.0 36.0 36.0 36.0 27 35.04030356587943 36.0 36.0 36.0 36.0 36.0 28 35.02412795214419 36.0 36.0 36.0 36.0 36.0 29 35.00312597110006 36.0 36.0 36.0 36.0 36.0 30 34.990944491920445 36.0 36.0 36.0 36.0 36.0 31 34.987750543816034 36.0 36.0 36.0 36.0 36.0 32 34.959807139527655 36.0 36.0 36.0 36.0 36.0 33 34.94002388906153 36.0 36.0 36.0 36.0 36.0 34 34.93152482131759 36.0 36.0 36.0 36.0 36.0 35 34.91826930546924 36.0 36.0 36.0 36.0 36.0 36 34.89133196084524 36.0 36.0 36.0 32.0 36.0 37 34.88679789465507 36.0 36.0 36.0 32.0 36.0 38 34.8710922933499 36.0 36.0 36.0 32.0 36.0 39 34.8517703154133 36.0 36.0 36.0 32.0 36.0 40 34.840942549720324 36.0 36.0 36.0 32.0 36.0 41 34.812168854878806 36.0 36.0 36.0 32.0 36.0 42 34.78892071939092 36.0 36.0 36.0 32.0 36.0 43 34.77555061373524 36.0 36.0 36.0 32.0 36.0 44 34.74269635643257 36.0 36.0 36.0 32.0 36.0 45 34.727319958048476 36.0 36.0 36.0 32.0 36.0 46 34.71063063238036 36.0 36.0 36.0 32.0 36.0 47 34.68832640615289 36.0 36.0 36.0 32.0 36.0 48 34.666656308266006 36.0 36.0 36.0 32.0 36.0 49 34.643932566811685 36.0 36.0 36.0 32.0 36.0 50 34.22617017557489 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 1.0 20 4.0 21 15.0 22 59.0 23 200.0 24 511.0 25 1122.0 26 2386.0 27 4392.0 28 7835.0 29 12416.0 30 18967.0 31 28047.0 32 43220.0 33 73426.0 34 168759.0 35 668399.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.23978085172521 17.626865091700342 11.999533727074914 26.133820329499535 2 16.673027711820374 19.090419100616195 37.1761815277191 27.060371659844325 3 19.423670975441826 22.12964392639443 27.814274990556044 30.632410107607704 4 13.11588439625194 15.412635383618886 33.77965135531712 37.69182886481206 5 15.185091671845866 35.99897063393412 32.61866842759478 16.197269266625234 6 36.20245961179153 33.653117825970426 15.880849443945944 14.2635731182921 7 32.03814481044127 29.340914387818522 18.977237414543193 19.643703387197018 8 28.710573337476692 33.20783483530143 18.02322871348664 20.05836311373524 9 26.734870261031695 14.843847110006214 18.43458669981355 39.98669592914854 10 17.453986806621742 26.270612832711343 29.65150098226867 26.623899378398246 11 37.51446939092604 21.30525559353636 21.077241298943445 20.103033716594158 12 24.9483374766936 23.226868396519578 27.771325357364823 24.053468769422 13 29.903861093847112 19.074056090739592 24.620299875699192 26.401782939714106 14 23.749417339962708 19.15553138595401 24.354509788688627 32.74054148539465 15 25.62558266003729 26.588816811684275 21.50510798632691 26.28049254195152 16 26.339545832394595 25.54391737039598 22.869972575921192 25.24656422128823 17 24.64030453697949 25.83572871348664 24.342759477936607 25.181207271597266 18 25.21599714107864 24.795995956335414 25.290674808377496 24.697332094208452 19 26.01472771784466 24.690631497272662 24.745110263663634 24.549530521219044 20 26.341482836710835 24.038704314420116 24.489490714305138 25.130322134563915 21 26.785173244251087 23.909454630205097 24.36820229956495 24.93716982597887 22 26.34982908638906 23.823609384711002 24.667204008701056 25.15935752019888 23 25.157706650093225 23.843905376009943 25.1323609384711 25.86602703542573 24 24.97149793639233 24.44661325564457 24.9773245933479 25.6045642146152 25 25.27581696299814 24.040867814702274 25.012163040089963 25.67115218220962 26 24.946831961808353 24.82690040533953 25.225539303561824 25.000728329290293 27 25.431655654349182 24.300805239299407 24.851615334117984 25.415923772233423 28 25.29145848203664 24.22535895157492 24.99283796316528 25.490344603223157 29 25.015489196406893 24.705802379218255 25.13192522456907 25.14678319980578 30 25.041757951490855 24.692059385633712 25.130129430227317 25.136053232648116 31 25.481307544474518 24.327917439914852 24.602839338206376 25.587935677404257 32 25.384171661416193 24.4095642817466 24.46967607608852 25.736587980748688 33 25.02070880937699 24.29228311588679 24.90194269510709 25.785065379629135 34 25.656319251707682 24.441762045063015 24.76387656128916 25.138042141940147 35 25.837793114699654 24.215471775434835 25.177153100871173 24.769582008994337 36 24.97552827843381 24.744892013673088 24.73391858297079 25.545661124922315 37 25.794685490707913 24.340153455169087 24.737338394770756 25.12782265935225 38 25.17615755127408 24.19505515848353 24.964360627719078 25.664426662523304 39 25.837608655329902 24.301308962298506 24.389388849882543 25.47169353248905 40 25.763187538844 24.4944453076445 24.701775170913614 25.04059198259789 41 25.096673949987863 24.805341102209276 24.998203447438698 25.099781500364166 42 25.94177001291626 24.65033844480485 24.59682823319187 24.811063309087025 43 25.567413182456928 24.089919851765096 24.768455799020508 25.574211166757465 44 25.09354493798794 24.51377511728928 24.747431095279392 25.64524884944339 45 25.265842256245712 24.599949890555536 24.738430642119514 25.395777211079235 46 25.37315172149917 24.484191185753325 24.573145506350134 25.56951158639737 47 25.36535531405165 24.465331910335607 25.00284049250741 25.166472283105335 48 25.820968429557677 24.96705443859501 24.129649645683475 25.082327486163834 49 25.37985980682165 24.871761504561427 24.178370472807224 25.570008215809704 50 25.342510983269694 25.088759580013754 24.433356510524906 25.13537292619165 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 14.0 1 23.5 2 33.0 3 94.5 4 156.0 5 165.0 6 174.0 7 142.5 8 111.0 9 147.0 10 183.0 11 326.5 12 470.0 13 907.0 14 1344.0 15 1597.0 16 1850.0 17 1847.0 18 1844.0 19 1763.0 20 1682.0 21 1965.5 22 2249.0 23 2738.0 24 3227.0 25 4153.5 26 5080.0 27 6300.0 28 7520.0 29 8930.0 30 10340.0 31 11954.0 32 13568.0 33 15660.5 34 17753.0 35 20402.0 36 23051.0 37 27164.5 38 31278.0 39 35327.5 40 39377.0 41 43498.5 42 47620.0 43 50920.0 44 54220.0 45 59172.0 46 64124.0 47 68565.5 48 73007.0 49 77097.5 50 81188.0 51 81249.0 52 81310.0 53 81996.0 54 82682.0 55 82579.0 56 82476.0 57 79327.5 58 76179.0 59 70761.0 60 65343.0 61 57604.0 62 49865.0 63 42864.0 64 35863.0 65 30694.5 66 25526.0 67 21588.5 68 17651.0 69 15207.5 70 12764.0 71 9837.0 72 6910.0 73 5876.5 74 4843.0 75 3645.0 76 2447.0 77 2086.0 78 1725.0 79 1431.5 80 1138.0 81 914.5 82 691.0 83 570.0 84 449.0 85 354.0 86 259.0 87 179.5 88 100.0 89 63.5 90 27.0 91 20.0 92 13.0 93 13.0 94 13.0 95 12.5 96 12.0 97 10.0 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.031075201988812924 2 0.005341050341827222 3 9.71100062150404E-5 4 9.71100062150404E-5 5 0.0 6 3.884400248601616E-4 7 0.0 8 0.0 9 0.0 10 9.71100062150404E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.768800497203232E-4 17 0.0 18 9.71100062150404E-5 19 9.71100062150404E-5 20 3.884400248601616E-4 21 0.0 22 0.0 23 0.0 24 9.711000621504039E-4 25 9.71100062150404E-5 26 5.826600372902424E-4 27 3.884400248601616E-4 28 0.00242775015537601 29 9.711000621504039E-4 30 0.0015537600994406464 31 0.0012624300807955252 32 0.0011653200745804849 33 4.8555003107520194E-4 34 1.942200124300808E-4 35 9.71100062150404E-5 36 0.0 37 0.0012624300807955252 38 0.0 39 0.0012624300807955252 40 0.0 41 9.711000621504039E-4 42 0.00485550031075202 43 0.004175730267246737 44 0.003981510254816656 45 0.0013595400870105656 46 0.001747980111870727 47 8.739900559353635E-4 48 0.003010410192666252 49 0.003690180236171535 50 0.0011653200745804849 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1029760.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.84695458721099 #Duplication Level Percentage of deduplicated Percentage of total 1 78.00131455016822 46.681411296266766 2 13.278518953110266 15.89357841544421 3 3.9089898898619873 7.018234212613117 4 1.60137326360161 3.8334925193575757 5 0.862694767404492 2.5814827283740587 6 0.5261469389250859 1.8892975176029811 7 0.35792299931497407 1.499442104000512 8 0.24923474783756133 1.193275250831161 9 0.1883837250574481 1.0146773014634463 >10 0.9213754505704823 9.660858294697375 >50 0.0583204534646896 2.4311139356457527 >100 0.042294941962664756 4.881644696170241 >500 0.0034293187205503496 1.4214917275327799 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 9.71100062150404E-5 0.0 5 0.0 0.0 0.0 9.71100062150404E-5 0.0 6 0.0 0.0 0.0 9.71100062150404E-5 0.0 7 0.0 0.0 0.0 9.71100062150404E-5 9.71100062150404E-5 8 0.0 0.0 0.0 9.71100062150404E-5 9.71100062150404E-5 9 0.0 0.0 0.0 9.71100062150404E-5 9.71100062150404E-5 10 0.0 0.0 0.0 9.71100062150404E-5 1.942200124300808E-4 11 0.0 0.0 0.0 9.71100062150404E-5 1.942200124300808E-4 12 0.0 0.0 0.0 9.71100062150404E-5 7.768800497203232E-4 13 0.0 0.0 0.0 9.71100062150404E-5 0.0011653200745804849 14 0.0 0.0 0.0 9.71100062150404E-5 0.0011653200745804849 15 0.0 0.0 0.0 9.71100062150404E-5 0.0018450901180857675 16 0.0 0.0 0.0 1.942200124300808E-4 0.001942200124300808 17 0.0 0.0 0.0 1.942200124300808E-4 0.0020393101305158485 18 0.0 0.0 0.0 1.942200124300808E-4 0.0021364201367308887 19 0.0 0.0 0.0 1.942200124300808E-4 0.0021364201367308887 20 0.0 0.0 0.0 2.913300186451212E-4 0.0025248601615910503 21 0.0 0.0 0.0 7.768800497203232E-4 0.0027190801740211313 22 0.0 0.0 0.0 0.0010682100683654444 0.0027190801740211313 23 0.0 0.0 0.0 0.0015537600994406464 0.0027190801740211313 24 0.0 0.0 0.0 0.0023306401491609697 0.003010410192666252 25 0.0 0.0 0.0 0.002913300186451212 0.003010410192666252 26 0.0 0.0 0.0 0.003884400248601616 0.003398850217526414 27 0.0 0.0 0.0 0.004467060285891858 0.0034959602237414544 28 0.0 0.0 0.0 0.00495261031696706 0.0034959602237414544 29 0.0 0.0 0.0 0.006020820385332504 0.003690180236171535 30 0.0 0.0 0.0 0.009128340584213798 0.003690180236171535 31 0.0 0.0 0.0 0.014178060907395897 0.003884400248601616 32 0.0 0.0 0.0 0.018742231199502798 0.004175730267246737 33 0.0 0.0 0.0 0.024860161591050343 0.004175730267246737 34 0.0 0.0 0.0 0.030686761963952765 0.004175730267246737 35 0.0 0.0 0.0 0.037775792417650715 0.004175730267246737 36 0.0 0.0 0.0 0.045544592914853944 0.004175730267246737 37 0.0 0.0 0.0 0.057974673710379114 0.004175730267246737 38 0.0 0.0 0.0 0.07351227470478558 0.004369950279676818 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 575 0.0 27.172506 1 GTATCAA 1315 0.0 25.10179 1 TATACCG 55 1.5936454E-4 23.999443 5 GTCGTAA 70 3.2153308E-5 21.99949 30 GTCCTAT 230 0.0 18.178787 1 AACCGCG 140 8.366078E-8 17.286154 41 ACGGTAT 255 0.0 17.254501 9 TCCTATT 245 0.0 17.060827 2 TACGACG 285 0.0 16.982063 5 GTAATAC 105 3.774219E-5 16.761517 3 GTGTATA 175 3.610694E-9 16.347242 1 GCGCAAT 150 1.8362698E-7 16.133743 35 CGCAATA 150 1.8362698E-7 16.133743 36 CTAGCGG 150 1.8372884E-7 16.13296 29 GACGGTA 280 0.0 15.7139225 8 CTATTCC 240 3.6379788E-12 15.582972 4 ATCAACG 2105 0.0 15.572084 3 CTACGAC 325 0.0 15.5688715 4 CCTTATA 85 0.002979999 15.529053 2 GCACCGT 85 0.002979999 15.529053 6 >>END_MODULE