##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062050_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1150070 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28768683645343 32.0 32.0 32.0 32.0 32.0 2 31.46390567530672 32.0 32.0 32.0 32.0 32.0 3 31.584499204396256 32.0 32.0 32.0 32.0 32.0 4 31.66284139226308 32.0 32.0 32.0 32.0 32.0 5 31.63487352943734 32.0 32.0 32.0 32.0 32.0 6 35.291472692966515 36.0 36.0 36.0 36.0 36.0 7 35.29310041997444 36.0 36.0 36.0 36.0 36.0 8 35.245735476970964 36.0 36.0 36.0 36.0 36.0 9 35.33273279017799 36.0 36.0 36.0 36.0 36.0 10 35.214252175954506 36.0 36.0 36.0 36.0 36.0 11 35.33076856191362 36.0 36.0 36.0 36.0 36.0 12 35.25376890102341 36.0 36.0 36.0 36.0 36.0 13 35.28362882259341 36.0 36.0 36.0 36.0 36.0 14 35.2546079803838 36.0 36.0 36.0 36.0 36.0 15 35.22759745058996 36.0 36.0 36.0 36.0 36.0 16 35.24183397532324 36.0 36.0 36.0 36.0 36.0 17 35.230696392393504 36.0 36.0 36.0 36.0 36.0 18 35.22333944890311 36.0 36.0 36.0 36.0 36.0 19 35.21046023285539 36.0 36.0 36.0 36.0 36.0 20 35.21102889389341 36.0 36.0 36.0 36.0 36.0 21 35.20317545888511 36.0 36.0 36.0 36.0 36.0 22 35.185551314267826 36.0 36.0 36.0 36.0 36.0 23 35.15436364743016 36.0 36.0 36.0 36.0 36.0 24 35.1423626387959 36.0 36.0 36.0 36.0 36.0 25 35.13020163990018 36.0 36.0 36.0 36.0 36.0 26 35.08503308494266 36.0 36.0 36.0 36.0 36.0 27 35.071526081021155 36.0 36.0 36.0 36.0 36.0 28 35.04738668081073 36.0 36.0 36.0 36.0 36.0 29 35.033621431738936 36.0 36.0 36.0 36.0 36.0 30 35.01422348204892 36.0 36.0 36.0 36.0 36.0 31 35.01514951263836 36.0 36.0 36.0 36.0 36.0 32 34.98653734120532 36.0 36.0 36.0 36.0 36.0 33 34.970287895519405 36.0 36.0 36.0 36.0 36.0 34 34.95929378211761 36.0 36.0 36.0 36.0 36.0 35 34.94329736450825 36.0 36.0 36.0 36.0 36.0 36 34.924237655099255 36.0 36.0 36.0 36.0 36.0 37 34.91319137096003 36.0 36.0 36.0 36.0 36.0 38 34.89170137469893 36.0 36.0 36.0 32.0 36.0 39 34.87488500699958 36.0 36.0 36.0 32.0 36.0 40 34.86992791743111 36.0 36.0 36.0 32.0 36.0 41 34.84437642926083 36.0 36.0 36.0 32.0 36.0 42 34.80850556922622 36.0 36.0 36.0 32.0 36.0 43 34.809876790108426 36.0 36.0 36.0 32.0 36.0 44 34.75954246263271 36.0 36.0 36.0 32.0 36.0 45 34.75242550453451 36.0 36.0 36.0 32.0 36.0 46 34.719451859452036 36.0 36.0 36.0 32.0 36.0 47 34.702217256340916 36.0 36.0 36.0 32.0 36.0 48 34.674345909379426 36.0 36.0 36.0 32.0 36.0 49 34.65780778561305 36.0 36.0 36.0 32.0 36.0 50 34.255319241437476 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 11.0 21 36.0 22 74.0 23 220.0 24 506.0 25 1255.0 26 2591.0 27 4858.0 28 8311.0 29 13520.0 30 20387.0 31 30241.0 32 46610.0 33 79231.0 34 184384.0 35 757832.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.91488554830438 17.985664073814103 12.036280800452987 26.063169577428525 2 16.350739954591422 19.54020989510462 37.30938093204974 26.799669218254213 3 19.116712330672907 22.801454176148 28.061060790371346 30.02077270280775 4 13.07198692253515 15.561835366542907 34.52015964245654 36.8460180684654 5 14.952742007008268 36.21536080412497 32.931386785152206 15.900510403714557 6 35.67623827460637 34.03259633343419 16.11930772789087 14.17185766406856 7 31.37417722399506 29.774796316745938 19.602458980757692 19.248567478501307 8 28.273148590955334 33.565087342509585 18.551305572704273 19.61045849383081 9 26.841061848409225 14.8635300459972 18.65982070656569 39.635587399027884 10 17.217662592418367 26.49875790061292 30.26714049330953 26.01643901365918 11 37.379116053805426 21.254271479127357 21.46356308746424 19.90304937960298 12 24.465119514464337 23.460832818871893 28.15211248010991 23.92193518655386 13 29.690627527020098 19.27317467632405 25.024737624666326 26.01146017198953 14 23.541697461893623 19.24830662481414 24.798055770518314 32.41194014277392 15 25.258114723451612 27.05991809194223 21.842148738772423 25.839818445833735 16 25.86945539315809 25.85249974131762 23.362888338772184 24.915156526752106 17 24.36790804038015 26.23153373272931 24.667802829392993 24.732755397497545 18 25.002238996095016 25.121275332175724 25.67419867851407 24.20228699321519 19 25.68808855113167 24.982740181032458 25.121514342605234 24.20765692523064 20 25.797433881940485 24.452465254107597 25.003825874038316 24.746274989913605 21 26.39352387245994 24.225829732103264 24.732929299955657 24.647717095481145 22 25.92111784500074 24.217221560426758 25.00952115958159 24.852139434990914 23 24.63773912695673 24.303063555317117 25.580552123394334 25.47864519433182 24 24.78998940056223 24.745643926713452 25.35239435125615 25.11197232146817 25 25.05086655745573 24.37568908968861 25.28250503448492 25.290939318370743 26 24.70173321241221 25.151535440294037 25.640118219816166 24.506613127477586 27 25.266897725869647 24.726667860801033 25.016651218277907 24.989783195051416 28 24.9448069874919 24.62143114894505 25.421392889905263 25.012368973657782 29 24.658975500493884 24.871746268033778 25.462582951905283 25.006695279567047 30 24.679102024774487 24.961610498289648 25.536453070899277 24.822834406036588 31 25.349066923115714 24.685278931817827 24.769621917350833 25.196032227715627 32 25.06530071369941 24.783055551691035 24.859573032457323 25.29207070215223 33 24.798729117520978 24.518484575246486 25.27722297918295 25.405563328049585 34 25.254986252915064 24.65484469532947 25.320634887510412 24.76953416424506 35 25.52209865486449 24.50207378681298 25.468362795308114 24.507464763014426 36 24.64984679166797 24.9498290535864 25.25128948896935 25.14903466577628 37 25.527996487124526 24.670733138849883 25.038019920786397 24.763250453239195 38 24.8202283339275 24.54511464519551 25.478362186649505 25.156294834227484 39 25.45382138605838 24.5878718370321 24.82542321447359 25.132883562435925 40 25.56950930770241 24.648347186125356 25.058496490210587 24.72364701596165 41 24.759926404095772 25.051127589421114 25.428063133877764 24.76088287260535 42 25.556380660543887 24.997869605972756 25.093259085478365 24.352490648004995 43 25.27362543814417 24.339381628683302 25.17623591221378 25.210757020958745 44 24.744700980153457 24.877741681912724 25.141736172462487 25.23582116547133 45 24.945111034399403 25.037541878650387 25.017629683604785 24.99971740334542 46 24.842789717334522 24.85305012295096 25.1130383669608 25.19112179275372 47 24.95485006395335 24.861376436124473 25.310658515186642 24.87311498473554 48 25.581874607076493 25.167016946470234 24.454602607055623 24.796505839397653 49 25.03932502689058 25.253406212528184 24.589684973709407 25.117583786871833 50 24.987239740708052 25.406002321628097 24.743860076257224 24.862897861406626 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 317.0 1 192.0 2 67.0 3 151.0 4 235.0 5 255.5 6 276.0 7 211.5 8 147.0 9 211.5 10 276.0 11 470.0 12 664.0 13 1161.0 14 1658.0 15 2035.0 16 2412.0 17 2360.0 18 2308.0 19 2170.5 20 2033.0 21 2453.5 22 2874.0 23 3412.5 24 3951.0 25 5149.0 26 6347.0 27 7999.0 28 9651.0 29 11215.5 30 12780.0 31 14930.5 32 17081.0 33 19945.5 34 22810.0 35 26680.0 36 30550.0 37 35168.0 38 39786.0 39 44342.5 40 48899.0 41 52940.5 42 56982.0 43 60464.5 44 63947.0 45 69682.0 46 75417.0 47 79917.5 48 84418.0 49 87792.0 50 91166.0 51 89633.0 52 88100.0 53 87104.0 54 86108.0 55 86229.0 56 86350.0 57 82674.0 58 78998.0 59 72249.0 60 65500.0 61 57973.0 62 50446.0 63 43497.0 64 36548.0 65 30969.0 66 25390.0 67 21987.0 68 18584.0 69 16208.5 70 13833.0 71 10875.0 72 7917.0 73 7017.5 74 6118.0 75 4597.5 76 3077.0 77 2660.0 78 2243.0 79 1989.0 80 1735.0 81 1336.5 82 938.0 83 774.5 84 611.0 85 472.0 86 333.0 87 220.0 88 107.0 89 69.5 90 32.0 91 26.0 92 20.0 93 15.0 94 10.0 95 9.0 96 8.0 97 7.5 98 7.0 99 6.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03225890597963602 2 0.00582573234672672 3 2.608536871668681E-4 4 0.0 5 0.0 6 1.7390245811124542E-4 7 0.0 8 0.0 9 0.0 10 8.695122905562271E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 9.564635196118497E-4 17 0.0 18 8.695122905562271E-5 19 0.0 20 5.217073743337362E-4 21 0.0 22 0.0 23 8.695122905562271E-5 24 7.825610615006043E-4 25 1.7390245811124542E-4 26 7.825610615006043E-4 27 3.4780491622249084E-4 28 0.0013042684358343405 29 5.217073743337362E-4 30 0.0013912196648899634 31 3.4780491622249084E-4 32 5.217073743337362E-4 33 2.608536871668681E-4 34 6.956098324449817E-4 35 0.0 36 1.7390245811124542E-4 37 0.0013042684358343405 38 0.0 39 2.608536871668681E-4 40 8.695122905562271E-5 41 5.217073743337362E-4 42 0.004173658994669889 43 0.004260610223725513 44 0.003999756536558644 45 0.0018259758101680768 46 0.0015651221230012086 47 0.0011303659777230951 48 0.00321719547505804 49 0.0033910979331692854 50 0.0013042684358343405 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1150070.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.20141810378826 #Duplication Level Percentage of deduplicated Percentage of total 1 80.65574481594294 50.975574505848606 2 12.134262405214697 15.33805183306107 3 3.266568779103643 6.193553375187314 4 1.3432897430137163 3.3959126673096063 5 0.6957746889744486 2.198697351195368 6 0.4498821309362104 1.7059913192833585 7 0.28207691008209346 1.2479362512066152 8 0.20783421902662347 1.0508333898380748 9 0.15567107171206168 0.8854769240944934 >10 0.7126536685283625 7.99363969676679 >50 0.0522282257267696 2.3372815231827206 >100 0.04069158419824368 5.16023620089873 >500 0.003044944411966777 1.330143501390269 >1k 2.768131283606161E-4 0.18667146073700075 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 8.69512290556227E-5 7 0.0 0.0 0.0 0.0 8.69512290556227E-5 8 0.0 0.0 0.0 0.0 8.69512290556227E-5 9 0.0 0.0 0.0 0.0 8.69512290556227E-5 10 0.0 0.0 0.0 0.0 8.69512290556227E-5 11 0.0 0.0 0.0 0.0 8.69512290556227E-5 12 0.0 0.0 0.0 0.0 8.69512290556227E-5 13 0.0 0.0 0.0 0.0 1.739024581112454E-4 14 0.0 0.0 0.0 0.0 1.739024581112454E-4 15 0.0 0.0 0.0 0.0 1.739024581112454E-4 16 0.0 0.0 0.0 8.69512290556227E-5 3.478049162224908E-4 17 0.0 0.0 0.0 8.69512290556227E-5 3.478049162224908E-4 18 0.0 0.0 0.0 8.69512290556227E-5 3.478049162224908E-4 19 0.0 8.69512290556227E-5 0.0 8.69512290556227E-5 5.217073743337363E-4 20 0.0 2.6085368716686813E-4 0.0 2.6085368716686813E-4 5.217073743337363E-4 21 0.0 3.478049162224908E-4 0.0 4.347561452781135E-4 5.217073743337363E-4 22 0.0 3.478049162224908E-4 0.0 4.347561452781135E-4 5.217073743337363E-4 23 0.0 3.478049162224908E-4 0.0 6.956098324449816E-4 6.086586033893589E-4 24 0.0 3.478049162224908E-4 0.0 0.0013042684358343405 6.086586033893589E-4 25 0.0 3.478049162224908E-4 0.0 0.001478170893945586 6.086586033893589E-4 26 0.0 3.478049162224908E-4 0.0 0.001999878268279322 6.086586033893589E-4 27 0.0 3.478049162224908E-4 0.0 0.002347683184501813 6.086586033893589E-4 28 0.0 3.478049162224908E-4 0.0 0.0033910979331692854 6.086586033893589E-4 29 0.0 3.478049162224908E-4 0.0 0.00547792743050423 6.086586033893589E-4 30 0.0 3.478049162224908E-4 0.0 0.009390732738007251 6.086586033893589E-4 31 0.0 3.478049162224908E-4 0.0 0.017477197040180165 6.086586033893589E-4 32 0.0 3.478049162224908E-4 0.0 0.025911466258575565 6.956098324449816E-4 33 8.69512290556227E-5 3.478049162224908E-4 0.0 0.03382402810263723 6.956098324449816E-4 34 8.69512290556227E-5 3.478049162224908E-4 0.0 0.043301712069700106 6.956098324449816E-4 35 8.69512290556227E-5 3.478049162224908E-4 0.0 0.05434451815976419 6.956098324449816E-4 36 8.69512290556227E-5 3.478049162224908E-4 0.0 0.06999573938977627 6.956098324449816E-4 37 8.69512290556227E-5 3.478049162224908E-4 0.0 0.0907770831340701 6.956098324449816E-4 38 8.69512290556227E-5 3.478049162224908E-4 0.0 0.11625379324736755 6.956098324449816E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAA 30 0.0057453155 29.332897 10 GGTATCA 695 0.0 26.598783 1 GTATCAA 1465 0.0 25.387293 1 CGGATCG 70 1.1323355E-6 25.142485 26 GCGAATT 50 0.0025799328 22.000631 40 CGCAATA 190 0.0 21.999674 36 TCTAGCG 195 0.0 21.435581 28 ATAAGCG 55 0.0044838665 19.999704 3 TAGATCG 55 0.0044838665 19.999704 5 CTAGCGG 215 0.0 19.441572 29 CGACGGT 295 0.0 18.643793 7 ACTGCGT 95 1.5972042E-5 18.526041 8 CAATACG 230 0.0 18.174435 38 GCTCGAC 85 1.4309186E-4 18.117378 11 TCAACGC 2150 0.0 17.59974 4 ACGACGG 315 0.0 17.46006 6 CAACGCA 2200 0.0 17.199743 5 TAACACT 180 2.8558134E-10 17.110859 4 AACGCAG 2240 0.0 17.089033 6 GCGCAAT 245 0.0 17.060972 35 >>END_MODULE