##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062049_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1087095 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31441042411197 32.0 32.0 32.0 32.0 32.0 2 31.50126621868374 32.0 32.0 32.0 32.0 32.0 3 31.61204678523956 32.0 32.0 32.0 32.0 32.0 4 31.67500540431149 32.0 32.0 32.0 32.0 32.0 5 31.665881086749547 32.0 32.0 32.0 32.0 32.0 6 35.310994899249835 36.0 36.0 36.0 36.0 36.0 7 35.30967210777347 36.0 36.0 36.0 36.0 36.0 8 35.25491240415971 36.0 36.0 36.0 36.0 36.0 9 35.34206670070233 36.0 36.0 36.0 36.0 36.0 10 35.23914009355208 36.0 36.0 36.0 36.0 36.0 11 35.349135080190784 36.0 36.0 36.0 36.0 36.0 12 35.27219976175035 36.0 36.0 36.0 36.0 36.0 13 35.303247646249865 36.0 36.0 36.0 36.0 36.0 14 35.26396405097991 36.0 36.0 36.0 36.0 36.0 15 35.25913834577475 36.0 36.0 36.0 36.0 36.0 16 35.268301298414585 36.0 36.0 36.0 36.0 36.0 17 35.256598549344815 36.0 36.0 36.0 36.0 36.0 18 35.247832986077576 36.0 36.0 36.0 36.0 36.0 19 35.24133125439819 36.0 36.0 36.0 36.0 36.0 20 35.23842994402513 36.0 36.0 36.0 36.0 36.0 21 35.22876749502113 36.0 36.0 36.0 36.0 36.0 22 35.210988000128786 36.0 36.0 36.0 36.0 36.0 23 35.18558267676698 36.0 36.0 36.0 36.0 36.0 24 35.17692933920218 36.0 36.0 36.0 36.0 36.0 25 35.150135912684725 36.0 36.0 36.0 36.0 36.0 26 35.110795284680734 36.0 36.0 36.0 36.0 36.0 27 35.091501662688174 36.0 36.0 36.0 36.0 36.0 28 35.069995722544945 36.0 36.0 36.0 36.0 36.0 29 35.05173604882738 36.0 36.0 36.0 36.0 36.0 30 35.03173871648752 36.0 36.0 36.0 36.0 36.0 31 35.03085930852409 36.0 36.0 36.0 36.0 36.0 32 35.00479534907253 36.0 36.0 36.0 36.0 36.0 33 34.992934380159966 36.0 36.0 36.0 36.0 36.0 34 34.98249003077008 36.0 36.0 36.0 36.0 36.0 35 34.97554951499179 36.0 36.0 36.0 36.0 36.0 36 34.946042434193885 36.0 36.0 36.0 36.0 36.0 37 34.92331121015183 36.0 36.0 36.0 36.0 36.0 38 34.90676067868954 36.0 36.0 36.0 36.0 36.0 39 34.85794249812574 36.0 36.0 36.0 36.0 36.0 40 34.86862509716262 36.0 36.0 36.0 36.0 36.0 41 34.84109116498558 36.0 36.0 36.0 36.0 36.0 42 34.81665355833667 36.0 36.0 36.0 32.0 36.0 43 34.813364057419086 36.0 36.0 36.0 32.0 36.0 44 34.75999245696098 36.0 36.0 36.0 32.0 36.0 45 34.763231364324184 36.0 36.0 36.0 32.0 36.0 46 34.71531650867679 36.0 36.0 36.0 32.0 36.0 47 34.70594290287417 36.0 36.0 36.0 32.0 36.0 48 34.67829490522907 36.0 36.0 36.0 32.0 36.0 49 34.6489644419301 36.0 36.0 36.0 32.0 36.0 50 34.268425482593514 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 4.0 20 5.0 21 16.0 22 69.0 23 193.0 24 523.0 25 1202.0 26 2512.0 27 4773.0 28 7965.0 29 12981.0 30 19498.0 31 28811.0 32 43073.0 33 71724.0 34 162847.0 35 730899.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.417408091398364 20.060289355781734 12.967824513070514 24.554478039749384 2 14.582417238708349 21.687754474988086 40.070576849836534 23.659251436467034 3 17.825814190519292 25.88106618391084 29.431639640435215 26.86147998513465 4 11.211531650867679 17.964483324824418 38.0982342849521 32.72575073935581 5 12.63780994301326 39.22941417263441 34.25983929647363 13.872936587878703 6 31.12843151413908 38.1992157064759 18.371841231614958 12.30051154777006 7 29.04272395696788 31.998307415635246 21.31350066001591 17.645467967380956 8 26.432924445425655 35.893275196739935 19.945450949549027 17.728349408285386 9 26.765278103569607 15.2170693453654 20.491309407181525 37.526343143883466 10 15.63930994007878 29.342356778714628 32.24118613477767 22.77714714642892 11 34.95922619458281 23.35913604606773 23.155841945736114 18.525795813613346 12 23.216094269590055 26.540826698678586 30.07694819679973 20.166130834931632 13 28.244633633675072 21.916023898555324 26.12807528320892 23.711267184560686 14 21.75789604404399 22.3762412668626 27.1406822770779 28.72518041201551 15 23.250865839692022 30.929587570543514 23.222073507835102 22.597473081929362 16 22.809234963931097 28.912339962063722 26.547761630634557 21.730663443370627 17 21.833694387335054 29.291828221084632 26.59528376084887 22.279193630731445 18 22.119982264643166 27.791340951196492 28.92702930933296 21.161647474827383 19 23.31249798775636 27.277468850468452 27.624908586646065 21.785124575129128 20 24.572643872500095 26.489318741485302 27.339937502932138 21.598099883082465 21 25.360617057386893 26.39842884016576 26.169561997801484 22.071392104645867 22 24.24691494303626 27.76454679673809 26.936376305658662 21.05216195456699 23 22.513487781656615 27.9283779246524 27.431641208909983 22.126493084781 24 22.640782200504653 27.448953027678556 27.986720474074296 21.9235442977425 25 22.505086965960565 27.443767408830162 27.4888417907592 22.562303834450073 26 21.657484686222798 28.596357441359665 28.07073543845835 21.675422433959195 27 22.59098347611474 27.714372183428647 27.45064129747869 22.244003042977926 28 21.74394590989582 27.963663960628292 27.882712784306513 22.409677345169378 29 22.177239828827737 27.747329572842037 27.83076317367803 22.244667424652192 30 21.78002967574693 27.912128144769078 28.382009469378144 21.92583271010585 31 22.95561816925753 27.487445830102224 27.339711835921438 22.217224164718804 32 22.54949939471099 27.795184180799275 27.41278502857185 22.242531395917887 33 21.851672304025506 27.875259982356614 27.99916842441263 22.27389928920525 34 22.64761021667099 27.99585313397468 28.07312392947752 21.283412719876807 35 22.84153900214701 27.711403061740754 28.060038966271545 21.387018969840693 36 21.39870149223526 28.040813397921433 28.25284657996456 22.30763852987874 37 22.41000407514831 27.74513672904495 27.480114104152698 22.364745091654044 38 21.644106540826698 27.76951416389552 27.942176166756354 22.644203128521426 39 23.35956242732879 27.407624773707372 27.26761770896192 21.965195090001913 40 23.09367911146598 27.23462736433096 28.088647347883438 21.58304617631962 41 22.40173455335895 27.912547455065447 28.192011450848646 21.493706540726958 42 22.87179336217 28.1307437983077 27.831123360458932 21.166339479063367 43 22.39949956764116 27.46582525343587 28.0911817195003 22.043493459422663 44 21.838669141848918 28.075778845287005 27.73458269935919 22.35096931350489 45 22.379187490858513 28.15449135617808 27.469259307298376 21.997061845665026 46 21.8094192906233 27.82385998287134 27.748979593714097 22.617741132791263 47 22.364529663328376 27.27243457951233 28.025458957595696 22.337576799563603 48 22.15556853672111 28.238021425055997 27.355997221826144 22.250412816396743 49 22.28180226723076 28.111876789816137 27.25368496292269 22.352635980030414 50 22.21466878857847 28.425860340180485 27.2888590431159 22.070611828125145 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 1.0 2 2.0 3 15.0 4 28.0 5 40.0 6 52.0 7 72.5 8 93.0 9 143.5 10 194.0 11 282.0 12 370.0 13 677.5 14 985.0 15 1391.5 16 1798.0 17 2075.0 18 2352.0 19 2795.0 20 3238.0 21 3993.5 22 4749.0 23 6055.0 24 7361.0 25 9460.5 26 11560.0 27 14601.5 28 17643.0 29 21975.5 30 26308.0 31 31489.0 32 36670.0 33 43001.5 34 49333.0 35 55172.0 36 61011.0 37 66320.0 38 71629.0 39 73759.0 40 75889.0 41 77990.0 42 80091.0 43 81174.5 44 82258.0 45 83613.5 46 84969.0 47 84840.5 48 84712.0 49 84494.5 50 84277.0 51 75454.5 52 66632.0 53 62282.5 54 57933.0 55 54029.5 56 50126.0 57 44967.0 58 39808.0 59 34213.5 60 28619.0 61 23214.5 62 17810.0 63 14474.5 64 11139.0 65 9208.5 66 7278.0 67 6806.5 68 6335.0 69 6091.5 70 5848.0 71 4115.5 72 2383.0 73 2251.5 74 2120.0 75 1526.5 76 933.0 77 900.5 78 868.0 79 738.0 80 608.0 81 484.5 82 361.0 83 339.5 84 318.0 85 277.0 86 236.0 87 171.5 88 107.0 89 71.5 90 36.0 91 22.5 92 9.0 93 6.5 94 4.0 95 6.0 96 8.0 97 5.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03090806231286134 2 0.004875378876731105 3 2.759648420791191E-4 4 0.0 5 0.0 6 1.8397656138607942E-4 7 0.0 8 0.0 9 0.0 10 9.198828069303971E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.278945262373574E-4 17 0.0 18 9.198828069303971E-5 19 0.0 20 3.6795312277215883E-4 21 0.0 22 0.0 23 0.0 24 7.359062455443177E-4 25 2.759648420791191E-4 26 1.8397656138607942E-4 27 1.8397656138607942E-4 28 0.0018397656138607942 29 2.759648420791191E-4 30 0.0011038593683164765 31 5.519296841582382E-4 32 0.0010118710876234368 33 1.8397656138607942E-4 34 8.278945262373574E-4 35 9.198828069303971E-5 36 9.198828069303971E-5 37 0.0016557890524747149 38 0.0 39 6.439179648512779E-4 40 9.198828069303971E-5 41 0.0012878359297025558 42 0.004875378876731105 43 0.00321958982425639 44 0.0034035663856424687 45 0.0016557890524747149 46 0.0025756718594051116 47 0.0011038593683164765 48 0.004599414034651986 49 0.0038635077891076676 50 0.002299707017325993 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1087095.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.90311044226429 #Duplication Level Percentage of deduplicated Percentage of total 1 69.33515362618094 37.373804434433936 2 17.00466770227471 18.332089623794364 3 6.550842703446694 10.59332393201365 4 3.044589245029593 6.564513213046408 5 1.5152679859600313 4.083882879841547 6 0.8403423138368874 2.7178238731234594 7 0.48512623260832266 1.830486902630821 8 0.30548335902033164 1.3173202591637447 9 0.20708905335692634 1.0046469703034129 >10 0.6034243875993116 5.4316876847053885 >50 0.04964033583277935 1.9175788231394153 >100 0.05184900953933604 5.861723591066779 >500 0.004978876687135935 1.9101034622299764 >1k 0.0015451686270421866 1.0610143505071066 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1901 0.17486972159746847 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1387 0.1275877453212461 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1304 0.11995271802372379 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1255 0.11544529226976484 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1209 0.11121383135788501 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 1195 0.10992599542818246 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1139 0.10477465170937222 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 9.198828069303971E-5 0.0 23 0.0 0.0 0.0 9.198828069303971E-5 0.0 24 0.0 0.0 0.0 3.6795312277215883E-4 0.0 25 0.0 0.0 0.0 3.6795312277215883E-4 0.0 26 0.0 0.0 0.0 3.6795312277215883E-4 0.0 27 0.0 0.0 0.0 3.6795312277215883E-4 0.0 28 0.0 0.0 0.0 0.0011038593683164765 0.0 29 0.0 0.0 0.0 0.0023916952980190323 0.0 30 0.0 0.0 0.0 0.004507425753958945 0.0 31 0.0 0.0 0.0 0.010670640560392606 0.0 32 0.0 0.0 0.0 0.019501515506924416 0.0 33 0.0 0.0 0.0 0.02824040217276319 0.0 34 0.0 0.0 0.0 0.038451101329690596 0.0 35 0.0 0.0 0.0 0.04856981220592497 0.0 36 0.0 0.0 0.0 0.0653116792920582 0.0 37 0.0 0.0 0.0 0.08840073774601116 0.0 38 0.0 0.0 0.0 0.12133254223411938 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 915 0.0 33.674297 1 ACGGTCG 30 0.0057454663 29.332598 12 GTATCAA 2215 0.0 27.026312 1 CGCGGGA 130 1.8189894E-12 23.693893 44 TAAACGC 125 4.0017767E-11 22.880478 28 GTAAACG 125 4.0017767E-11 22.880478 27 CGCTTCG 145 0.0 22.758049 32 GCTTCGG 175 0.0 21.370892 33 CGGGCCC 145 1.2732926E-11 21.240847 37 AACCGCG 115 8.76571E-9 21.043919 41 TCGGCGC 115 8.771167E-9 21.042952 18 GTAGGAC 710 0.0 20.760044 3 CCCCGCG 150 2.1827873E-11 20.533762 41 AAACGCT 150 2.1827873E-11 20.532818 29 GCGCCCC 130 1.6243575E-9 20.307182 21 GCCGATC 120 1.4315447E-8 20.16616 8 CGCCCCT 120 1.4315447E-8 20.16616 5 ATACGAA 255 0.0 19.843552 40 CGATCGC 100 1.1234933E-6 19.799503 10 CGCGGTC 125 2.2855602E-8 19.361296 44 >>END_MODULE