##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062048_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 234750 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14055378061768 32.0 32.0 32.0 32.0 32.0 2 31.524966986155484 32.0 32.0 32.0 32.0 32.0 3 31.626892438764642 32.0 32.0 32.0 32.0 32.0 4 31.71590202342918 32.0 32.0 32.0 32.0 32.0 5 31.70672630457934 32.0 32.0 32.0 32.0 32.0 6 35.37208945686901 36.0 36.0 36.0 36.0 36.0 7 35.368328008519704 36.0 36.0 36.0 36.0 36.0 8 35.33277529286475 36.0 36.0 36.0 36.0 36.0 9 35.384609158679446 36.0 36.0 36.0 36.0 36.0 10 35.30866027689031 36.0 36.0 36.0 36.0 36.0 11 35.375718849840254 36.0 36.0 36.0 36.0 36.0 12 35.32254739084132 36.0 36.0 36.0 36.0 36.0 13 35.32282002129926 36.0 36.0 36.0 36.0 36.0 14 35.285022364217255 36.0 36.0 36.0 36.0 36.0 15 35.27525878594249 36.0 36.0 36.0 36.0 36.0 16 35.268681576144836 36.0 36.0 36.0 36.0 36.0 17 35.25590628328008 36.0 36.0 36.0 36.0 36.0 18 35.22997657082002 36.0 36.0 36.0 36.0 36.0 19 35.1788583599574 36.0 36.0 36.0 36.0 36.0 20 35.16207028753993 36.0 36.0 36.0 36.0 36.0 21 35.104511182108624 36.0 36.0 36.0 36.0 36.0 22 35.02980191693291 36.0 36.0 36.0 36.0 36.0 23 34.9982066027689 36.0 36.0 36.0 36.0 36.0 24 34.96660702875399 36.0 36.0 36.0 36.0 36.0 25 34.870909478168265 36.0 36.0 36.0 36.0 36.0 26 34.821644302449414 36.0 36.0 36.0 32.0 36.0 27 34.709708200212994 36.0 36.0 36.0 32.0 36.0 28 34.63748668796592 36.0 36.0 36.0 32.0 36.0 29 34.58560170394036 36.0 36.0 36.0 32.0 36.0 30 34.48302875399361 36.0 36.0 36.0 32.0 36.0 31 34.475659211927585 36.0 36.0 36.0 32.0 36.0 32 34.41699254526092 36.0 36.0 36.0 32.0 36.0 33 34.43423642172524 36.0 36.0 36.0 32.0 36.0 34 34.36588711395101 36.0 36.0 36.0 32.0 36.0 35 34.296886048988284 36.0 36.0 36.0 32.0 36.0 36 34.198807241746536 36.0 36.0 36.0 32.0 36.0 37 33.98996805111821 36.0 36.0 36.0 32.0 36.0 38 33.94456230031949 36.0 36.0 36.0 32.0 36.0 39 33.58324600638978 36.0 36.0 36.0 21.0 36.0 40 33.65257507987221 36.0 36.0 36.0 27.0 36.0 41 33.64932055378062 36.0 36.0 36.0 27.0 36.0 42 33.51433439829606 36.0 36.0 36.0 21.0 36.0 43 33.56175505857295 36.0 36.0 36.0 21.0 36.0 44 33.459906283280084 36.0 36.0 36.0 21.0 36.0 45 33.28433652822151 36.0 36.0 36.0 14.0 36.0 46 33.22617678381257 36.0 36.0 36.0 14.0 36.0 47 33.17956549520767 36.0 36.0 36.0 14.0 36.0 48 33.18300319488818 36.0 36.0 36.0 14.0 36.0 49 33.14693503727369 36.0 36.0 36.0 14.0 36.0 50 32.78215974440894 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 3.0 20 12.0 21 17.0 22 53.0 23 111.0 24 296.0 25 746.0 26 1566.0 27 2805.0 28 4394.0 29 5767.0 30 7219.0 31 9439.0 32 13286.0 33 18273.0 34 37356.0 35 133407.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.01346571781651 19.35483870967742 12.969702134912856 25.661993437593217 2 12.354414633938537 21.082720603897044 43.58657590035017 22.976288861814247 3 19.017252396166135 26.308413205537807 29.708626198083067 24.965708200212994 4 11.186794462193824 17.89137380191693 37.93312034078807 32.98871139510117 5 11.125026624068157 39.82917997870074 35.30223642172524 13.743556975505857 6 31.167625133120342 36.689243876464325 18.638551650692225 13.504579339723112 7 27.02151224707135 31.858998935037274 22.364643237486685 18.754845580404687 8 24.647923322683706 39.64728434504792 20.097976570820023 15.60681576144835 9 26.505644302449415 15.404046858359957 20.238551650692227 37.851757188498404 10 16.270500532481364 28.46815761448349 33.659637912673055 21.60170394036209 11 33.642598509052185 20.739936102236424 26.69520766773163 18.922257720979765 12 25.586794462193822 23.92800851970181 32.31352502662407 18.1716719914803 13 31.294142705005324 21.95101171458999 25.707348242811502 21.047497337593185 14 20.833652822151226 24.065601703940363 26.2790202342918 28.82172523961661 15 22.170820021299253 34.73312034078807 23.642598509052185 19.45346112886049 16 20.6888178913738 26.324174653887113 32.27774227902023 20.709265175718848 17 19.985516506922256 29.79595314164004 30.309265175718853 19.90926517571885 18 21.242598509052183 24.659424920127794 35.78317358892439 18.314802981895635 19 24.51160809371672 26.40894568690096 27.211501597444087 21.867944621938232 20 24.140354763405867 26.722272394227005 30.4288002453695 18.70857259699763 21 21.895633652822152 26.448136315228965 26.17380191693291 25.482428115015978 22 23.295420660276893 30.702875399361023 26.459211927582533 19.54249201277955 23 19.415548455804046 29.996592119275828 29.11352502662407 21.47433439829606 24 23.559807960194767 27.588895089523437 29.459877397835076 19.391419552446717 25 22.45537806176784 27.747390841320552 29.12247071352503 20.67476038338658 26 18.26453674121406 29.363152289669863 31.22768903088392 21.14462193823216 27 21.154845580404686 29.629392971246006 28.984451544195956 20.231309904153356 28 19.709988114965345 28.91982500457936 27.826742605932292 23.543444274523 29 21.33290734824281 27.42747603833866 28.04472843450479 23.19488817891374 30 20.716683422222978 27.221957162574334 30.113568592703665 21.94779082249902 31 23.34568690095847 25.49946751863685 28.765921192758253 22.388924387646433 32 20.09422830342195 29.511094828944955 29.231647419158335 21.163029448474756 33 18.91246006389776 29.56208732694356 31.419808306709264 20.105644302449413 34 20.070799023638013 29.47488594200614 31.50769545344176 18.94661958091408 35 20.261641157150827 30.071693596138854 30.035484709200038 19.631180537510275 36 19.135250266240682 29.05814696485623 31.18594249201278 20.62066027689031 37 20.60124047915211 28.813451019816995 27.59128938265715 22.994019118373746 38 21.301810436634717 30.98658146964856 26.946964856230032 20.764643237486688 39 23.04693989699549 27.231870907828426 28.25254422846724 21.468644966708837 40 24.523109691160812 27.305218317358893 28.97550585729499 19.1961661341853 41 22.95118979663125 25.899908837637277 30.71958627623048 20.429315089500992 42 22.14960955306287 30.71260293697892 29.26839659013935 17.869390919818855 43 19.84535753083264 29.919270666922277 29.760368074637356 20.475003727607728 44 19.32878357999131 29.863081392872054 29.785122136168834 21.023012890967802 45 20.074037470287035 30.36771659580994 28.72636807442938 20.831877859473643 46 20.58403799867942 26.969264521076063 29.88434258450659 22.56235489573793 47 24.214902789374136 26.91950517150306 28.76744423807658 20.098147801046228 48 19.959188715978172 30.14965557491512 27.390846855443705 22.500308853663004 49 21.92212660816222 27.607991820737837 29.265144415097556 21.204737156002384 50 19.539510117145902 32.882641107561234 26.280298189563368 21.2975505857295 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 192.0 1 131.5 2 71.0 3 197.5 4 324.0 5 292.5 6 261.0 7 196.0 8 131.0 9 169.0 10 207.0 11 324.0 12 441.0 13 674.0 14 907.0 15 1066.0 16 1225.0 17 1235.0 18 1245.0 19 1141.0 20 1037.0 21 1127.5 22 1218.0 23 1339.0 24 1460.0 25 1910.0 26 2360.0 27 3589.0 28 4818.0 29 6306.0 30 7794.0 31 9435.0 32 11076.0 33 13914.0 34 16752.0 35 19515.0 36 22278.0 37 21878.0 38 21478.0 39 19164.0 40 16850.0 41 15357.0 42 13864.0 43 12969.0 44 12074.0 45 12691.0 46 13308.0 47 13746.5 48 14185.0 49 13160.5 50 12136.0 51 10964.5 52 9793.0 53 9090.0 54 8387.0 55 8363.5 56 8340.0 57 8074.0 58 7808.0 59 6947.0 60 6086.0 61 5440.0 62 4794.0 63 4082.5 64 3371.0 65 2843.0 66 2315.0 67 2106.0 68 1897.0 69 1702.0 70 1507.0 71 1226.0 72 945.0 73 832.5 74 720.0 75 547.0 76 374.0 77 326.5 78 279.0 79 232.0 80 185.0 81 141.0 82 97.0 83 88.0 84 79.0 85 64.5 86 50.0 87 32.5 88 15.0 89 12.5 90 10.0 91 6.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.034078807241746535 2 0.003407880724174654 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 8.519701810436635E-4 21 0.0 22 0.0 23 0.0 24 0.002981895633652822 25 0.0 26 0.0 27 0.0 28 4.2598509052183177E-4 29 0.0 30 8.519701810436635E-4 31 0.0 32 4.2598509052183177E-4 33 0.0 34 4.2598509052183177E-4 35 4.2598509052183177E-4 36 0.0 37 8.519701810436635E-4 38 0.0 39 0.0012779552715654952 40 0.0 41 0.001703940362087327 42 0.008093716719914802 43 0.006389776357827476 44 0.005111821086261981 45 0.001703940362087327 46 0.0021299254526091584 47 8.519701810436635E-4 48 0.0046858359957401485 49 0.004259850905218317 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 234750.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.88596611406903 #Duplication Level Percentage of deduplicated Percentage of total 1 85.55524938225443 57.22445511062195 2 9.334164972589413 12.486492841194911 3 2.169671574001251 4.353617381319195 4 0.8354103497280906 2.2350891337302246 5 0.43675890762886405 1.4606520747841 6 0.279052842900516 1.1198831396567126 7 0.19597782319589283 0.917571622897265 8 0.1581480344730254 0.8462307259815518 9 0.12111038431675122 0.729052655532489 >10 0.8086739464446692 10.40935854832241 >50 0.07264532048944101 3.482675475863729 >100 0.030587503363975168 3.790835354587199 >500 0.0025489586136645975 0.9440859355082805 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 656 0.2794462193823216 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 522 0.2223642172523962 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 519 0.22108626198083067 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 518 0.22066027689030884 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 485 0.20660276890308837 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 475 0.20234291799787005 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 448 0.1908413205537806 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 329 0.14014909478168264 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 312 0.1329073482428115 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 289 0.12310969116080939 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 282 0.12012779552715655 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 240 0.10223642172523961 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 239 0.10181043663471778 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTA 237 0.10095846645367412 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 4.259850905218317E-4 0.0 11 0.0 0.0 0.0 4.259850905218317E-4 0.0 12 0.0 0.0 0.0 4.259850905218317E-4 0.0 13 0.0 0.0 0.0 4.259850905218317E-4 4.259850905218317E-4 14 0.0 0.0 0.0 4.259850905218317E-4 4.259850905218317E-4 15 0.0 0.0 0.0 4.259850905218317E-4 4.259850905218317E-4 16 0.0 0.0 0.0 4.259850905218317E-4 4.259850905218317E-4 17 0.0 0.0 0.0 8.519701810436634E-4 4.259850905218317E-4 18 0.0 0.0 0.0 8.519701810436634E-4 4.259850905218317E-4 19 0.0 0.0 0.0 8.519701810436634E-4 4.259850905218317E-4 20 0.0 0.0 0.0 0.0012779552715654952 4.259850905218317E-4 21 0.0 0.0 0.0 0.002129925452609159 8.519701810436634E-4 22 0.0 0.0 0.0 0.0038338658146964857 8.519701810436634E-4 23 0.0 0.0 0.0 0.006389776357827476 8.519701810436634E-4 24 0.0 0.0 0.0 0.00724174653887114 8.519701810436634E-4 25 0.0 0.0 0.0 0.009371671991480299 8.519701810436634E-4 26 0.0 0.0 0.0 0.013205537806176783 8.519701810436634E-4 27 0.0 0.0 0.0 0.016187433439829604 8.519701810436634E-4 28 0.0 0.0 0.0 0.020447284345047924 0.0012779552715654952 29 0.0 0.0 0.0 0.0268370607028754 0.0012779552715654952 30 0.0 0.0 0.0 0.03237486687965921 0.0012779552715654952 31 4.259850905218317E-4 0.0 0.0 0.04600638977635783 0.0012779552715654952 32 4.259850905218317E-4 0.0 0.0 0.06474973375931842 0.0012779552715654952 33 4.259850905218317E-4 0.0 0.0 0.07965921192758253 0.0012779552715654952 34 4.259850905218317E-4 0.0 0.0 0.09755058572949947 0.0017039403620873268 35 4.259850905218317E-4 0.0 0.0 0.11246006389776358 0.0017039403620873268 36 4.259850905218317E-4 0.0 0.0 0.1397231096911608 0.0017039403620873268 37 4.259850905218317E-4 0.0 0.0 0.18274760383386582 0.0017039403620873268 38 4.259850905218317E-4 0.0 0.0 0.23471778487752928 0.0017039403620873268 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGACC 30 1.2979427E-4 36.666664 4 GGCGTAG 25 0.0023489455 35.2 28 GTGCTAG 25 0.0023489455 35.2 1 GGTCTAC 25 0.0023489455 35.2 1 ATATGAG 35 3.21003E-4 31.42857 43 CAACGTA 30 0.00573571 29.333332 30 ATTCCGA 30 0.00573571 29.333332 6 AATTCCG 30 0.00573571 29.333332 5 GCGTAGG 30 0.00573571 29.333332 29 TAATCCT 30 0.00573571 29.333332 4 CGCCCCT 40 7.01515E-4 27.5 5 GGTCGTA 45 0.0013948638 24.444445 29 ATCGTAA 45 0.0013948638 24.444445 1 TATGAGA 45 0.0013948638 24.444445 44 CCCCCTT 45 0.0013948638 24.444445 28 ACTGTTC 135 0.0 24.444445 8 GGTTACC 45 0.0013948638 24.444445 11 GATATAC 145 0.0 24.275862 1 ATGCCGG 55 1.5882908E-4 24.0 19 GTAAACC 55 1.5882908E-4 24.0 33 >>END_MODULE