##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062047_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1828020 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30234242513758 32.0 32.0 32.0 32.0 32.0 2 31.448977035262196 32.0 32.0 32.0 32.0 32.0 3 31.573169330751305 32.0 32.0 32.0 32.0 32.0 4 31.650536099167404 32.0 32.0 32.0 32.0 32.0 5 31.622455990634677 32.0 32.0 32.0 32.0 32.0 6 35.262530497478146 36.0 36.0 36.0 36.0 36.0 7 35.27066990514327 36.0 36.0 36.0 36.0 36.0 8 35.21821971313224 36.0 36.0 36.0 36.0 36.0 9 35.30104594041641 36.0 36.0 36.0 36.0 36.0 10 35.182828415444035 36.0 36.0 36.0 36.0 36.0 11 35.30136267655715 36.0 36.0 36.0 36.0 36.0 12 35.21623122285314 36.0 36.0 36.0 36.0 36.0 13 35.26362184221179 36.0 36.0 36.0 36.0 36.0 14 35.22504403671732 36.0 36.0 36.0 36.0 36.0 15 35.19981783569108 36.0 36.0 36.0 36.0 36.0 16 35.2062351615409 36.0 36.0 36.0 36.0 36.0 17 35.18702749422873 36.0 36.0 36.0 36.0 36.0 18 35.188206365357054 36.0 36.0 36.0 36.0 36.0 19 35.17985415914487 36.0 36.0 36.0 36.0 36.0 20 35.176796752770755 36.0 36.0 36.0 36.0 36.0 21 35.16857528911062 36.0 36.0 36.0 36.0 36.0 22 35.15437960197372 36.0 36.0 36.0 36.0 36.0 23 35.12111136639643 36.0 36.0 36.0 36.0 36.0 24 35.1034507281102 36.0 36.0 36.0 36.0 36.0 25 35.087398387326175 36.0 36.0 36.0 36.0 36.0 26 35.048134593713414 36.0 36.0 36.0 36.0 36.0 27 35.0340970011269 36.0 36.0 36.0 36.0 36.0 28 35.015057275084516 36.0 36.0 36.0 36.0 36.0 29 34.99539009420028 36.0 36.0 36.0 36.0 36.0 30 34.97480333913196 36.0 36.0 36.0 36.0 36.0 31 34.98895362195162 36.0 36.0 36.0 36.0 36.0 32 34.954513626765575 36.0 36.0 36.0 36.0 36.0 33 34.93462489469481 36.0 36.0 36.0 32.0 36.0 34 34.92220763448977 36.0 36.0 36.0 32.0 36.0 35 34.91065360335226 36.0 36.0 36.0 32.0 36.0 36 34.88553079287973 36.0 36.0 36.0 32.0 36.0 37 34.87847014802902 36.0 36.0 36.0 32.0 36.0 38 34.86029310401418 36.0 36.0 36.0 32.0 36.0 39 34.850759291473835 36.0 36.0 36.0 32.0 36.0 40 34.83213695692607 36.0 36.0 36.0 32.0 36.0 41 34.81148072778197 36.0 36.0 36.0 32.0 36.0 42 34.77031761140469 36.0 36.0 36.0 32.0 36.0 43 34.77616492160917 36.0 36.0 36.0 32.0 36.0 44 34.71567652432687 36.0 36.0 36.0 32.0 36.0 45 34.715575321933024 36.0 36.0 36.0 32.0 36.0 46 34.69651918469163 36.0 36.0 36.0 32.0 36.0 47 34.68240555354974 36.0 36.0 36.0 32.0 36.0 48 34.65034955853875 36.0 36.0 36.0 32.0 36.0 49 34.636621590573405 36.0 36.0 36.0 32.0 36.0 50 34.21481603045918 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 4.0 20 9.0 21 44.0 22 119.0 23 315.0 24 808.0 25 1882.0 26 4038.0 27 7977.0 28 13721.0 29 22087.0 30 33946.0 31 49921.0 32 76860.0 33 131546.0 34 303358.0 35 1181384.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.310491538640434 17.640723969519954 11.960053080153768 26.088731411685846 2 16.63941354267817 19.446312075167196 36.42364976681209 27.490624615342536 3 18.888377708473627 22.723908418594398 27.9675253950601 30.420188477871875 4 12.877102001072199 15.552236846424 34.62073719105918 36.949923961444625 5 15.2519202480937 36.18622125918822 32.34846027311533 16.21339821960275 6 35.98205049515404 34.30372912286921 15.878681653398191 13.835538728578564 7 31.767322020546825 29.41778536339865 19.501591886303213 19.313300729751315 8 28.984912637717315 32.33356309011937 18.428682399536108 20.252841872627215 9 27.116771151300313 14.196562400849006 18.356746643909805 40.329919803940875 10 17.18500583692283 25.77015105978169 29.634336204566914 27.41050689872857 11 38.086727716326955 20.951302502160807 21.26957035481012 19.692399426702114 12 25.00722092756097 23.27977812058949 27.53914070962025 24.1738602422293 13 29.473419328016103 18.666754193061344 24.953063970853712 26.906762508068837 14 24.23534753449087 19.18934147328804 23.956904191420225 32.61840680080086 15 25.64310018489951 26.679357993895035 21.34932878196081 26.32821303924465 16 26.815269306955607 25.281139514235996 22.617145339158988 25.286445839649414 17 24.804870843863853 25.7853305762519 24.081574599840263 25.328223980043983 18 25.817798293014622 24.357747024372845 25.179730177711594 24.644724504900935 19 26.23833437270927 24.471778208115886 24.4803667355937 24.809520683581145 20 26.480483233753716 23.643257342104945 24.052006052456814 25.824253371684524 21 27.50511482368902 23.68048489622652 23.7646743471078 25.049725932976664 22 26.728099254931564 23.528790713449524 24.532062012450627 25.21104801916828 23 24.900014715383158 23.662719041760507 25.13934483175503 26.297921411101306 24 25.283069237493695 24.468899856564395 24.67716047829374 25.570870427648167 25 25.495209555287868 23.78515700645619 24.731867480227177 25.98776595802877 26 25.137252928317753 25.115808867775485 24.882768822086508 24.86416938182025 27 25.811235581346754 24.129793316681383 24.488652712725393 25.57031838924647 28 25.24870144611993 24.017516459290096 25.14065957510825 25.593122519481724 29 25.006605547346865 24.314705233945784 25.207042197275836 25.471647021431515 30 25.13168799695842 24.413414697523788 25.21221338132763 25.242683924190164 31 25.83510073506042 24.249827544990108 24.11853745022601 25.796534269723466 32 25.766543946696135 24.09729706073818 23.972188335950023 26.163970656615664 33 25.10092909471252 23.989396154081803 24.63692877961681 26.27274597158887 34 26.0427744298712 24.101426251963886 24.72582176883252 25.129977549332388 35 26.51244821563085 23.76115487143691 24.97236069984185 24.754036213090387 36 24.91605662526299 24.731977475057683 24.439803109159758 25.912162790519567 37 26.340544905108786 24.24523574553006 24.32953608010556 25.0846832692556 38 25.29485454207284 23.861117493244056 24.86931215194582 25.97471581273728 39 26.311251883884346 23.89774645036529 23.986203538830583 25.80479812691979 40 26.268873572977085 24.246137485441892 24.530926647917774 24.95406229366325 41 24.990973741794313 24.856619256017506 25.02571115973742 25.126695842450765 42 26.624170230830924 24.646619815549712 24.321878771367206 24.407331182252157 43 26.007146858533343 23.558155208935105 24.657427831171333 25.777270101360223 44 25.306820457104216 24.4011024419812 24.268384883108983 26.0236922178056 45 25.476797574586552 24.701678412802785 24.37032851069789 25.45119550191277 46 25.374567280970865 24.495726420915812 24.354586712298193 25.775119585815133 47 25.615261235752218 24.12560366388695 24.909956433355728 25.349178667005106 48 26.66824584658358 24.826732415986623 23.491796561508966 25.013225175920823 49 25.388590832029962 24.995090130971782 23.93477724512309 25.68154179187517 50 25.764934354485774 24.96750547045952 23.926805251641138 25.340754923413567 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 113.0 1 76.5 2 40.0 3 120.5 4 201.0 5 222.0 6 243.0 7 185.0 8 127.0 9 190.0 10 253.0 11 409.5 12 566.0 13 1103.0 14 1640.0 15 2107.0 16 2574.0 17 2611.5 18 2649.0 19 2610.0 20 2571.0 21 3093.0 22 3615.0 23 4214.0 24 4813.0 25 6468.5 26 8124.0 27 10658.0 28 13192.0 29 15216.5 30 17241.0 31 19650.0 32 22059.0 33 25351.5 34 28644.0 35 33639.0 36 38634.0 37 48096.0 38 57558.0 39 64280.5 40 71003.0 41 78877.0 42 86751.0 43 90020.0 44 93289.0 45 103962.0 46 114635.0 47 123794.0 48 132953.0 49 139953.5 50 146954.0 51 142246.5 52 137539.0 53 138214.0 54 138889.0 55 142502.5 56 146116.0 57 142651.0 58 139186.0 59 129046.5 60 118907.0 61 103752.5 62 88598.0 63 76443.0 64 64288.0 65 53872.5 66 43457.0 67 38118.0 68 32779.0 69 29674.0 70 26569.0 71 20489.0 72 14409.0 73 12679.0 74 10949.0 75 7850.5 76 4752.0 77 4408.0 78 4064.0 79 3519.5 80 2975.0 81 2336.0 82 1697.0 83 1481.0 84 1265.0 85 990.0 86 715.0 87 481.5 88 248.0 89 157.5 90 67.0 91 54.5 92 42.0 93 30.5 94 19.0 95 18.5 96 18.0 97 20.5 98 23.0 99 15.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03254887802102822 2 0.005196879684029715 3 3.8292797671797904E-4 4 0.0 5 5.4703996673997004E-5 6 1.6411199002199102E-4 7 0.0 8 0.0 9 0.0 10 1.0940799334799401E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 7.11151956761961E-4 17 0.0 18 1.0940799334799401E-4 19 0.0 20 1.0940799334799401E-4 21 0.0 22 0.0 23 5.4703996673997004E-5 24 0.001203487926827934 25 3.2822398004398205E-4 26 4.3763197339197603E-4 27 3.2822398004398205E-4 28 0.0013675999168499251 29 6.01743963413967E-4 30 0.0013675999168499251 31 3.8292797671797904E-4 32 5.4703996673997E-4 33 2.1881598669598801E-4 34 6.564479600879641E-4 35 3.8292797671797904E-4 36 1.0940799334799401E-4 37 0.0017505278935679041 38 0.0 39 8.20559950109955E-4 40 5.4703996673997004E-5 41 0.00109407993347994 42 0.005579807660747694 43 0.004595135720615749 44 0.004266911740571766 45 0.0023522718569818713 46 0.002406975853655868 47 8.752639467839521E-4 48 0.003665167777157799 49 0.003774575770505793 50 0.00109407993347994 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1828020.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.43605778811686 #Duplication Level Percentage of deduplicated Percentage of total 1 73.00361842534015 33.90000243940728 2 14.999063326027903 13.929947427501121 3 5.114459679456616 7.124860356907233 4 2.2855998708452954 4.245369907323384 5 1.2104282447485664 2.8103757960756646 6 0.7317887739678557 2.0388831477999916 7 0.48031667902624947 1.561280914470151 8 0.3462439258441021 1.2862562359424938 9 0.24721656573660328 1.0331786459452232 >10 1.3708527685616236 11.38883577944085 >50 0.10460446536794145 3.364054193209716 >100 0.08641975282171202 8.453423058199796 >500 0.013240259101288005 4.254811602871913 >1k 0.006147263154169431 4.6087204949051905 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2968 0.16236146212842312 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2712 0.14835723897987987 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2709 0.1481931269898579 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2551 0.13954989551536637 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2507 0.1371429196617105 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 2402 0.1313990000109408 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2395 0.13101607203422283 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2380 0.13019551208411287 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2120 0.11597247294887364 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2068 0.11312786512182581 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAAT 1956 0.10700101749433813 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1955 0.10694631349766413 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCAC 1855 0.10147591383026444 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 1848 0.10109298585354645 No Hit ACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCG 1836 0.1004365378934585 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0940799334799401E-4 2 0.0 0.0 0.0 0.0 1.0940799334799401E-4 3 0.0 0.0 0.0 0.0 1.0940799334799401E-4 4 0.0 0.0 0.0 0.0 1.0940799334799401E-4 5 0.0 0.0 0.0 0.0 1.0940799334799401E-4 6 0.0 0.0 0.0 0.0 2.1881598669598801E-4 7 0.0 0.0 0.0 5.4703996673997004E-5 2.1881598669598801E-4 8 0.0 0.0 0.0 5.4703996673997004E-5 2.1881598669598801E-4 9 0.0 0.0 0.0 5.4703996673997004E-5 2.1881598669598801E-4 10 0.0 0.0 0.0 5.4703996673997004E-5 2.1881598669598801E-4 11 0.0 0.0 0.0 5.4703996673997004E-5 2.1881598669598801E-4 12 0.0 0.0 0.0 5.4703996673997004E-5 6.01743963413967E-4 13 0.0 0.0 0.0 5.4703996673997004E-5 6.56447960087964E-4 14 0.0 0.0 0.0 5.4703996673997004E-5 6.56447960087964E-4 15 0.0 0.0 0.0 5.4703996673997004E-5 7.11151956761961E-4 16 0.0 0.0 0.0 5.4703996673997004E-5 7.658559534359581E-4 17 0.0 0.0 0.0 5.4703996673997004E-5 7.658559534359581E-4 18 0.0 0.0 0.0 5.4703996673997004E-5 7.658559534359581E-4 19 0.0 0.0 0.0 1.0940799334799401E-4 7.658559534359581E-4 20 0.0 0.0 0.0 2.1881598669598801E-4 9.846719401319461E-4 21 0.0 0.0 0.0 2.1881598669598801E-4 9.846719401319461E-4 22 0.0 0.0 0.0 2.73519983369985E-4 9.846719401319461E-4 23 0.0 0.0 0.0 4.3763197339197603E-4 9.846719401319461E-4 24 0.0 0.0 0.0 5.4703996673997E-4 9.846719401319461E-4 25 0.0 0.0 0.0 7.11151956761961E-4 9.846719401319461E-4 26 0.0 0.0 0.0 9.846719401319461E-4 9.846719401319461E-4 27 0.0 0.0 0.0 0.001258191923501931 9.846719401319461E-4 28 0.0 0.0 0.0 0.0013675999168499251 9.846719401319461E-4 29 0.0 0.0 0.0 0.0019146398835898951 9.846719401319461E-4 30 0.0 0.0 0.0 0.002844607827047844 9.846719401319461E-4 31 0.0 0.0 0.0 0.004102799750549775 0.001039375936805943 32 0.0 0.0 0.0 0.006345663614183652 0.00109407993347994 33 0.0 0.0 0.0 0.008369711491121541 0.001148783930153937 34 0.0 0.0 0.0 0.01077668734477741 0.001148783930153937 35 0.0 0.0 0.0 0.012910143215063292 0.001148783930153937 36 0.0 0.0 0.0 0.01712235095896106 0.001148783930153937 37 0.0 0.0 0.0 0.022483342633012767 0.001148783930153937 38 0.0 0.0 0.0 0.029102526230566406 0.001148783930153937 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2290 0.0 27.777124 1 GGTATCA 1030 0.0 26.497774 1 CGTCGTA 690 0.0 19.767046 10 ACCGTCG 685 0.0 19.590183 8 GTATAGA 195 0.0 19.188421 1 ATACCGT 720 0.0 18.943419 6 TACCGTC 750 0.0 18.772318 7 CAACGTA 85 1.4313338E-4 18.117659 30 CTTAGTA 110 2.7972692E-6 18.000504 2 CCGTCGT 735 0.0 17.958212 9 GCATATA 270 0.0 17.934277 1 GTCGTAG 740 0.0 17.836874 11 TCAACGC 3540 0.0 17.710907 4 CATATAG 250 0.0 17.600492 2 AACGTAT 75 0.0012914448 17.599531 31 CAACGCA 3595 0.0 17.439947 5 AACGCAG 3640 0.0 17.284779 6 ATCAACG 3630 0.0 17.271793 3 CGCGGGA 510 0.0 17.256802 44 TAAACGC 565 0.0 17.132753 28 >>END_MODULE