##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062046_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1054760 Sequences flagged as poor quality 0 Sequence length 50 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.262511851037203 32.0 32.0 32.0 32.0 32.0 2 31.570663468466762 32.0 32.0 32.0 32.0 32.0 3 31.6677272554894 32.0 32.0 32.0 32.0 32.0 4 31.742418180439152 32.0 32.0 32.0 32.0 32.0 5 31.738189730365203 32.0 32.0 32.0 32.0 32.0 6 35.42516496643786 36.0 36.0 36.0 36.0 36.0 7 35.42888808828549 36.0 36.0 36.0 36.0 36.0 8 35.400746141302285 36.0 36.0 36.0 36.0 36.0 9 35.45147995752588 36.0 36.0 36.0 36.0 36.0 10 35.369571276878155 36.0 36.0 36.0 36.0 36.0 11 35.44731692517729 36.0 36.0 36.0 36.0 36.0 12 35.402249800902574 36.0 36.0 36.0 36.0 36.0 13 35.40747089385263 36.0 36.0 36.0 36.0 36.0 14 35.39620766809511 36.0 36.0 36.0 36.0 36.0 15 35.38266999127764 36.0 36.0 36.0 36.0 36.0 16 35.39203136258485 36.0 36.0 36.0 36.0 36.0 17 35.39290265084 36.0 36.0 36.0 36.0 36.0 18 35.37492510144488 36.0 36.0 36.0 36.0 36.0 19 35.33518430733058 36.0 36.0 36.0 36.0 36.0 20 35.32307254730934 36.0 36.0 36.0 36.0 36.0 21 35.27987030224885 36.0 36.0 36.0 36.0 36.0 22 35.22571675073002 36.0 36.0 36.0 36.0 36.0 23 35.24780803215897 36.0 36.0 36.0 36.0 36.0 24 35.223989343547345 36.0 36.0 36.0 36.0 36.0 25 35.16077117069286 36.0 36.0 36.0 36.0 36.0 26 35.15578709848686 36.0 36.0 36.0 36.0 36.0 27 35.0816745041526 36.0 36.0 36.0 36.0 36.0 28 35.01368747392772 36.0 36.0 36.0 36.0 36.0 29 34.98359532026243 36.0 36.0 36.0 36.0 36.0 30 34.90315806439379 36.0 36.0 36.0 36.0 36.0 31 34.90698452728583 36.0 36.0 36.0 36.0 36.0 32 34.84884713110091 36.0 36.0 36.0 36.0 36.0 33 34.90926845917555 36.0 36.0 36.0 36.0 36.0 34 34.87139254427547 36.0 36.0 36.0 36.0 36.0 35 34.85688403049035 36.0 36.0 36.0 36.0 36.0 36 34.75524574310744 36.0 36.0 36.0 32.0 36.0 37 34.63354033144981 36.0 36.0 36.0 32.0 36.0 38 34.604578292692175 36.0 36.0 36.0 32.0 36.0 39 34.36071807804619 36.0 36.0 36.0 32.0 36.0 40 34.491875876976756 36.0 36.0 36.0 32.0 36.0 41 34.475440858583944 36.0 36.0 36.0 32.0 36.0 42 34.46174674807539 36.0 36.0 36.0 32.0 36.0 43 34.489880162311806 36.0 36.0 36.0 32.0 36.0 44 34.33252114225037 36.0 36.0 36.0 32.0 36.0 45 34.305701771019 36.0 36.0 36.0 32.0 36.0 46 34.07431263984224 36.0 36.0 36.0 32.0 36.0 47 34.10770601843073 36.0 36.0 36.0 32.0 36.0 48 34.06643407030983 36.0 36.0 36.0 32.0 36.0 49 33.98706909628731 36.0 36.0 36.0 32.0 36.0 50 33.71137983996359 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 2.0 20 6.0 21 15.0 22 43.0 23 165.0 24 458.0 25 1209.0 26 2693.0 27 5556.0 28 9655.0 29 15154.0 30 22076.0 31 31540.0 32 47018.0 33 77593.0 34 167728.0 35 673847.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.08922669251408 21.740186059657074 13.416060235604752 24.754527012224095 2 11.49888452855806 21.418284250377592 47.35145456907153 19.73137665199282 3 18.093240787179557 27.50928416415976 30.46362513308803 23.93384991557265 4 10.330691342106261 17.91014069551367 40.76680951116842 30.99235845121165 5 10.209431529447457 41.59249497516023 36.26673366453032 11.931339830861996 6 28.893113125260722 40.26489438355645 19.110318935113202 11.731673556069627 7 26.427338920702343 32.52967499715575 23.042587887291894 18.00039819485001 8 22.63604990708787 42.885300921536654 20.24991467253214 14.22873449884334 9 26.481569266942245 14.924722211687966 21.94783647464826 36.64587204672153 10 15.5600473662704 30.15096339542967 34.34291624911472 19.946072989185208 11 32.758826652508624 21.979881679244567 28.34170806628996 16.919583601956845 12 24.882437710948462 25.207630171792633 33.728810345481435 16.181121771777466 13 29.95269065948652 24.052106640373168 26.62235958891122 19.372843111229095 14 18.57038568015473 26.221510106564526 28.175129887367746 27.032974325913006 15 19.963593613713073 39.093632674731694 22.798266904319465 18.144506807235768 16 18.041139372518384 29.08795967977428 34.106750755625 18.76415019208234 17 17.940763775645642 32.85742728203572 30.743391861655734 18.4584170806629 18 18.233092330183794 27.92270833688865 37.22010167261116 16.624097660316394 19 23.718002199552505 26.357275588759528 28.603378967727256 21.321343243960712 20 24.147787874909337 28.90311020094714 30.163023640561075 16.78607828358244 21 21.340399711782776 27.456482991391407 27.523512457810305 23.67960483901551 22 22.671413402100953 32.62192347074216 28.10288596457962 16.60377716257727 23 18.46195999461488 32.20880998295343 30.975162075092104 18.35406794733958 24 22.79032946195781 27.798530457454373 32.06437544441811 17.34676463616971 25 20.036690811179795 30.386628237703363 31.53826462892032 18.038416322196518 26 16.592431628866528 32.41776786713161 32.68503296490759 18.304767539094275 27 18.282297929951703 31.32434169733721 31.27409320431796 19.11926716839313 28 17.354349371889075 32.30756103342024 29.0734297226831 21.264659872007584 29 19.839413553238227 29.231511653372948 28.530593244523157 22.398481548865664 30 17.65703054855809 29.701151081728604 31.26048237160191 21.381335998111396 31 22.417464480003943 27.79187263808381 29.91899563691387 19.871667244998378 32 19.04988542384644 31.278578857499877 30.395152627572035 19.27638309108164 33 17.46797135648997 31.894679258484636 32.94041577270258 17.696933612322816 34 19.180925166224068 31.256950692627928 32.54322584192857 17.018898299219437 35 18.197978687094697 32.1102430884751 31.774052865106757 17.91772535932345 36 17.078498500605352 30.740007907019518 33.51040379840324 18.67108979397189 37 18.072434226119935 30.358568381132972 29.132590661294145 22.43640673145295 38 19.295289923774128 33.060601463840115 28.802381584436272 18.84172702794949 39 22.00113959681785 28.417107604675568 29.993865897328202 19.587886901178372 40 23.21904814275109 28.29006436541428 31.165697566932348 17.325189924902276 41 22.47392986591148 27.349488173037994 32.4493648263903 17.72721713466022 42 19.97855346842183 32.23995843430838 31.195317033210834 16.58617106405895 43 17.56208004535771 32.39852587446799 32.08261474296192 17.956779337212378 44 17.11879383873225 32.14072387121487 30.88455871616868 19.855923573884205 45 17.677342283406336 32.58509206060261 30.042190492443638 19.695375163547414 46 18.86531815746934 28.83085485117256 30.75473218645265 21.54909480490545 47 22.24726238445129 28.819530694477365 29.994595875799952 18.938611045271394 48 18.272630306477993 30.54549764156534 29.554338808694208 21.627533243262462 49 21.262888430633577 29.338927208514065 29.312000758491553 20.086183602360805 50 18.33605594516979 33.7147202125249 28.200412041939916 19.748811800365395 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 409.0 1 227.5 2 46.0 3 114.5 4 183.0 5 210.5 6 238.0 7 206.0 8 174.0 9 258.5 10 343.0 11 553.5 12 764.0 13 1459.0 14 2154.0 15 2818.0 16 3482.0 17 3795.0 18 4108.0 19 4359.5 20 4611.0 21 5643.5 22 6676.0 23 8337.5 24 9999.0 25 13315.5 26 16632.0 27 23208.0 28 29784.0 29 38879.5 30 47975.0 31 59743.0 32 71511.0 33 86912.5 34 102314.0 35 118175.5 36 134037.0 37 131429.5 38 128822.0 39 115861.0 40 102900.0 41 89922.0 42 76944.0 43 67321.5 44 57699.0 45 53028.5 46 48358.0 47 44359.0 48 40360.0 49 37079.0 50 33798.0 51 29697.5 52 25597.0 53 22810.0 54 20023.0 55 19164.0 56 18305.0 57 17233.5 58 16162.0 59 14338.0 60 12514.0 61 10849.5 62 9185.0 63 8015.0 64 6845.0 65 5843.0 66 4841.0 67 4612.0 68 4383.0 69 4262.0 70 4141.0 71 3391.0 72 2641.0 73 2426.0 74 2211.0 75 1679.5 76 1148.0 77 1013.0 78 878.0 79 723.0 80 568.0 81 460.0 82 352.0 83 321.0 84 290.0 85 226.0 86 162.0 87 139.0 88 116.0 89 79.5 90 43.0 91 26.5 92 10.0 93 10.0 94 10.0 95 7.5 96 5.0 97 5.0 98 5.0 99 4.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0347946452273503 2 0.004645606583488187 3 6.636580833554553E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 9.48082976222079E-5 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 3.792331904888316E-4 17 0.0 18 1.896165952444158E-4 19 0.0 20 4.740414881110395E-4 21 0.0 22 0.0 23 1.896165952444158E-4 24 9.48082976222079E-4 25 0.0 26 1.896165952444158E-4 27 1.896165952444158E-4 28 9.48082976222079E-4 29 9.48082976222079E-5 30 0.0012325078690887026 31 1.896165952444158E-4 32 2.844248928666237E-4 33 9.48082976222079E-5 34 8.532746785998711E-4 35 0.0 36 9.48082976222079E-5 37 9.48082976222079E-4 38 0.0 39 9.48082976222079E-5 40 9.48082976222079E-5 41 8.532746785998711E-4 42 0.0041715650953771475 43 0.0031286738215328606 44 0.003981948500132731 45 0.001896165952444158 46 0.0014221244643331183 47 9.48082976222079E-4 48 0.0033182904167772765 49 0.0033182904167772765 50 0.0012325078690887026 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1054760.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.20948334481488 #Duplication Level Percentage of deduplicated Percentage of total 1 80.88546638525689 51.12728540316478 2 12.533029032298263 15.844125797542766 3 3.2585409316874134 6.179120662496794 4 1.2045109536180838 3.045460602454774 5 0.5706278109093555 1.8034544554881542 6 0.31702510342601764 1.2023395796937044 7 0.22004204496886984 0.9736120783633151 8 0.13754524815363295 0.6955331257860392 9 0.10786850282609552 0.613648109953458 >10 0.6563043433846544 7.883626526143426 >50 0.06337930554173922 2.824428509494142 >100 0.0406709649375802 4.607162021569119 >500 0.0036286349028422805 1.5293809548759731 >1k 0.0013607380885658552 1.6708221729736077 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 3610 0.3422579544161705 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 2863 0.2714361560923812 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 2704 0.25636163677045015 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 2424 0.22981531343623193 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1501 0.14230725473093406 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 1172 0.11111532481322765 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 1152 0.1092191588607835 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 9.480829762220789E-5 0.0 11 0.0 0.0 0.0 9.480829762220789E-5 0.0 12 0.0 0.0 0.0 1.8961659524441578E-4 0.0 13 0.0 0.0 0.0 1.8961659524441578E-4 0.0 14 0.0 0.0 0.0 2.844248928666237E-4 0.0 15 0.0 0.0 0.0 2.844248928666237E-4 0.0 16 0.0 0.0 0.0 2.844248928666237E-4 0.0 17 0.0 0.0 0.0 2.844248928666237E-4 0.0 18 0.0 0.0 0.0 2.844248928666237E-4 0.0 19 0.0 0.0 0.0 2.844248928666237E-4 0.0 20 0.0 0.0 0.0 4.7404148811103946E-4 0.0 21 0.0 0.0 0.0 6.636580833554553E-4 0.0 22 0.0 0.0 0.0 7.584663809776631E-4 0.0 23 0.0 0.0 0.0 8.532746785998711E-4 0.0 24 0.0 0.0 0.0 8.532746785998711E-4 0.0 25 0.0 0.0 0.0 0.0011376995714664948 0.0 26 0.0 0.0 0.0 0.001990974250066366 0.0 27 0.0 0.0 0.0 0.002844248928666237 0.0 28 0.0 0.0 0.0 0.0041715650953771475 0.0 29 0.0 0.0 0.0 0.007300238916910008 0.0 30 0.0 0.0 0.0 0.01346277826235352 0.0 31 0.0 0.0 0.0 0.024934582274640675 0.0 32 0.0 0.0 0.0 0.03678561947741666 0.0 33 0.0 0.0 0.0 0.049015889870681485 0.0 34 0.0 0.0 0.0 0.062383859835412794 0.0 35 0.0 0.0 0.0 0.07963897000265463 0.0 36 0.0 0.0 0.0 0.1032462361105844 0.0 37 0.0 0.0 0.0 0.13358489134969093 0.0 38 0.0 0.0 0.0 0.172835526565285 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTACG 55 4.9621776E-6 27.998611 4 TAGGACC 1530 0.0 27.606474 4 GGTATCA 1025 0.0 26.623413 1 GTATCAA 2565 0.0 26.082674 1 TAGCGAG 95 9.622454E-10 25.473629 18 GGCGGGT 45 0.0013984997 24.443232 32 TGTAGGA 4570 0.0 23.876278 2 CTGTAGG 4440 0.0 23.692497 1 TGCGAGA 85 2.352117E-7 23.294065 19 GTCCTAC 4130 0.0 23.286127 1 GTAGGAC 4640 0.0 23.23161 3 AGGACCT 2640 0.0 23.08219 5 TTAGGAC 2775 0.0 22.8313 3 CTCTAGG 300 0.0 22.740831 1 GGACCTG 2595 0.0 22.549942 6 CCTACAC 215 0.0 22.510511 3 TCCTACA 4540 0.0 22.289644 2 TAGGACG 4915 0.0 22.155563 4 CGGGTCA 50 0.0025809645 21.99891 34 TATAGCG 100 4.6249625E-8 21.99891 16 >>END_MODULE