##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062045_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 761747 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.227993021304975 32.0 32.0 32.0 32.0 32.0 2 31.454439597399137 32.0 32.0 32.0 32.0 32.0 3 31.593724688118233 32.0 32.0 32.0 32.0 32.0 4 31.668122093030888 32.0 32.0 32.0 32.0 32.0 5 31.657476826295344 32.0 32.0 32.0 32.0 32.0 6 35.297594870737925 36.0 36.0 36.0 36.0 36.0 7 35.30457094022031 36.0 36.0 36.0 36.0 36.0 8 35.26628263714856 36.0 36.0 36.0 36.0 36.0 9 35.33537906942856 36.0 36.0 36.0 36.0 36.0 10 35.2380068447923 36.0 36.0 36.0 36.0 36.0 11 35.33626650318281 36.0 36.0 36.0 36.0 36.0 12 35.26496330146361 36.0 36.0 36.0 36.0 36.0 13 35.282901015691564 36.0 36.0 36.0 36.0 36.0 14 35.254471629031684 36.0 36.0 36.0 36.0 36.0 15 35.231726544377594 36.0 36.0 36.0 36.0 36.0 16 35.2461329023941 36.0 36.0 36.0 36.0 36.0 17 35.22809804305104 36.0 36.0 36.0 36.0 36.0 18 35.20977568667812 36.0 36.0 36.0 36.0 36.0 19 35.19219898470227 36.0 36.0 36.0 36.0 36.0 20 35.18052975594259 36.0 36.0 36.0 36.0 36.0 21 35.14697662084655 36.0 36.0 36.0 36.0 36.0 22 35.10111887542714 36.0 36.0 36.0 36.0 36.0 23 35.069305163000315 36.0 36.0 36.0 36.0 36.0 24 35.048605376850844 36.0 36.0 36.0 36.0 36.0 25 35.01316053755381 36.0 36.0 36.0 36.0 36.0 26 34.961739265136586 36.0 36.0 36.0 36.0 36.0 27 34.90746140122639 36.0 36.0 36.0 36.0 36.0 28 34.853131026443165 36.0 36.0 36.0 32.0 36.0 29 34.816737053116064 36.0 36.0 36.0 32.0 36.0 30 34.78355280690308 36.0 36.0 36.0 32.0 36.0 31 34.74625827210347 36.0 36.0 36.0 32.0 36.0 32 34.72642885367451 36.0 36.0 36.0 32.0 36.0 33 34.70318097741114 36.0 36.0 36.0 32.0 36.0 34 34.68388191879981 36.0 36.0 36.0 32.0 36.0 35 34.63063851908836 36.0 36.0 36.0 32.0 36.0 36 34.56664089257982 36.0 36.0 36.0 32.0 36.0 37 34.47739866386084 36.0 36.0 36.0 32.0 36.0 38 34.44157312073431 36.0 36.0 36.0 32.0 36.0 39 34.26573389852536 36.0 36.0 36.0 32.0 36.0 40 34.24762158564458 36.0 36.0 36.0 32.0 36.0 41 34.22817943490424 36.0 36.0 36.0 32.0 36.0 42 34.1526845527452 36.0 36.0 36.0 32.0 36.0 43 34.14452961416323 36.0 36.0 36.0 32.0 36.0 44 34.13093454913508 36.0 36.0 36.0 32.0 36.0 45 33.985241819134174 36.0 36.0 36.0 32.0 36.0 46 33.976509260948845 36.0 36.0 36.0 32.0 36.0 47 33.926352187799885 36.0 36.0 36.0 32.0 36.0 48 33.92746279276453 36.0 36.0 36.0 32.0 36.0 49 33.91511748651455 36.0 36.0 36.0 32.0 36.0 50 33.4937807434752 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 0.0 19 2.0 20 9.0 21 22.0 22 89.0 23 237.0 24 605.0 25 1425.0 26 3001.0 27 5706.0 28 9175.0 29 13647.0 30 19472.0 31 27222.0 32 39173.0 33 57627.0 34 119858.0 35 464474.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.8471114753065 17.67179341716831 11.917462468614412 26.56363263891078 2 14.165853812232596 20.572153248113807 39.78054899510187 25.481443944551728 3 18.90732749850016 25.063833530030312 28.662666213322797 27.366172758146735 4 11.994139786569557 16.827634372042162 36.7720516129371 34.40617422845118 5 12.781671604876685 38.11134142963478 34.98221850561932 14.124768459869221 6 33.13186661713141 36.12104806451486 17.5736826006535 13.173402717700233 7 28.527188160898564 30.805241110237386 21.636973955919746 19.030596772944296 8 26.420451934828755 36.244317338959 19.77717011028596 17.558060615926287 9 27.063710129478686 14.627822623521983 18.483433475944114 39.82503377105522 10 14.706851487436118 28.426761116223627 33.97295952593184 22.893427870408416 11 35.78904806976595 21.115147155157814 23.779942684382085 19.315862090694154 12 24.213945049996916 23.798058935578347 31.124901049823627 20.86309496460111 13 30.419680024995177 20.87162798146891 25.098490706231857 23.610201287304054 14 22.252795219410118 21.02246546425519 26.03200275156975 30.692736564764942 15 24.22326572996021 29.50060846974127 23.162283540335572 23.11384225996295 16 23.42266769063138 26.226886950357404 27.498047246782058 22.852398112229157 17 22.790244004899264 26.930988897888668 27.651963184626915 22.62680391258515 18 23.163889275427767 25.516116920863386 29.715679504716796 21.60431429899205 19 24.931243575622876 26.215659530001428 26.07466783590877 22.778429058466916 20 24.41522502251407 26.069319694491337 27.773037206627933 21.74241807636666 21 23.799502984586745 25.74660615663731 25.53735032760221 24.916540531173737 22 23.651553599817262 27.59367611556068 25.507944238703928 23.246826045918134 23 22.617220678256693 27.231351091635414 26.417957668359705 23.73347056174819 24 23.709270879827763 26.936487515425213 26.633365715335945 22.720875889411086 25 24.04249704954532 25.816576894953315 26.562362569199482 23.57856348630188 26 22.0398480852466 26.628666098671072 27.825920290701724 23.505565525380607 27 23.49859991414382 27.096945279157296 26.596511403512224 22.807943403186655 28 22.780231970435914 26.722154029944793 26.148069866817202 24.34954413280209 29 23.36358421038122 26.0320765194469 26.467132529298016 24.137206740873868 30 23.37626193008021 26.24131910256915 27.124834258858126 23.25758470849251 31 24.234881751767322 25.195308141175854 26.498237599196585 24.071572507860242 32 22.55183178578602 27.21967907811427 26.93611887473859 23.292370261361114 33 22.554296456552333 27.125779789535592 27.357222373920898 22.96270137999118 34 22.467305031388747 27.22484633824228 27.897387290643238 22.41046133972573 35 22.89424558842449 27.229942789328724 27.464404145213763 22.411407477033027 36 22.82275935222332 26.77553088701716 27.661655359280807 22.740054401478712 37 23.440890705798488 26.606041749536914 26.129234259248317 23.82383328541628 38 23.434552417009847 27.81290901047198 25.6438161226759 23.10872244984227 39 24.016073641538366 26.177167132264906 26.280351404146273 23.52640782205045 40 24.736099350832628 26.365253464085754 26.557706319043774 22.340940866037847 41 23.655740352010334 25.867127716973926 27.479228449639574 22.997903481376166 42 23.980029223605214 27.742469932901237 26.457077665734996 21.820423177758553 43 22.943631444141474 26.829316322685926 26.877496819693352 23.349555413479248 44 22.7907062230706 27.212313282938215 27.154154971551 22.84282552244018 45 23.622404906751246 27.114736795120553 26.36197267783954 22.900885620288662 46 23.132575673039433 26.019946674088356 27.14015840237564 23.707319250496568 47 24.81026816482941 26.035369348577518 26.669318514492613 22.48504397210046 48 22.86288178649495 27.67833113434815 25.890917206566762 23.56786987259014 49 23.52507945843546 26.384664160930736 27.07455111399348 23.015705266640325 50 22.724277177394793 28.575516977010405 25.239453038848104 23.460752806746694 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 54.0 1 54.0 2 54.0 3 136.5 4 219.0 5 239.0 6 259.0 7 226.0 8 193.0 9 262.0 10 331.0 11 454.5 12 578.0 13 996.0 14 1414.0 15 1873.0 16 2332.0 17 2412.0 18 2492.0 19 2513.0 20 2534.0 21 2973.5 22 3413.0 23 3896.0 24 4379.0 25 5783.5 26 7188.0 27 9854.5 28 12521.0 29 15160.5 30 17800.0 31 20071.5 32 22343.0 33 26669.0 34 30995.0 35 35014.5 36 39034.0 37 40971.5 38 42909.0 39 42053.0 40 41197.0 41 41509.0 42 41821.0 43 42107.0 44 42393.0 45 46627.5 46 50862.0 47 53504.0 48 56146.0 49 54580.5 50 53015.0 51 50892.5 52 48770.0 53 47049.5 54 45329.0 55 43487.0 56 41645.0 57 40196.0 58 38747.0 59 35491.0 60 32235.0 61 28379.0 62 24523.0 63 21015.0 64 17507.0 65 14712.0 66 11917.0 67 10111.5 68 8306.0 69 7070.5 70 5835.0 71 4773.5 72 3712.0 73 3151.0 74 2590.0 75 2093.5 76 1597.0 77 1357.0 78 1117.0 79 911.0 80 705.0 81 548.0 82 391.0 83 287.0 84 183.0 85 137.0 86 91.0 87 62.5 88 34.0 89 26.0 90 18.0 91 11.0 92 4.0 93 4.5 94 5.0 95 5.0 96 5.0 97 4.0 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03295057282798619 2 0.003675761112285313 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 2.6255436516323664E-4 17 0.0 18 1.3127718258161832E-4 19 0.0 20 1.3127718258161832E-4 21 0.0 22 0.0 23 0.0 24 9.189402780713283E-4 25 0.0 26 5.251087303264733E-4 27 0.0010502174606529466 28 0.0015753261909794195 29 7.876630954897098E-4 30 0.0022317121038875113 31 2.6255436516323664E-4 32 5.251087303264733E-4 33 3.938315477448549E-4 34 0.0011814946432345647 35 1.3127718258161832E-4 36 3.938315477448549E-4 37 0.0018378805561426565 38 0.0 39 3.938315477448549E-4 40 2.6255436516323664E-4 41 0.0010502174606529466 42 0.004463424207775023 43 0.003675761112285313 44 0.0043321470251934035 45 0.0027568208342139845 46 0.002100434921305893 47 0.0018378805561426565 48 0.004200869842611786 49 0.003675761112285313 50 0.0014440490083978013 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 761747.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.053187731652294 #Duplication Level Percentage of deduplicated Percentage of total 1 76.8647498405176 47.69702751800129 2 13.960341514439541 17.325673855869923 3 4.362637643947602 8.121467181751614 4 1.8331246056951176 4.550049011708408 5 0.9500851409451193 2.9477905806060405 6 0.5277251680248789 1.9648217353299338 7 0.3300736820799783 1.4337486911570627 8 0.20876614929172319 1.036368404321076 9 0.15965857144680176 0.8916590976260229 >10 0.7268098895755081 7.792807202440041 >50 0.04926990354960838 2.1226088716665465 >100 0.024421884178119416 2.9102021788930146 >500 0.001698913678855688 0.6698314463177428 >1k 6.37092629570883E-4 0.5359442243112846 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGTTGATA 1614 0.21188137268673196 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAGTGGTATC 1388 0.1822127294232862 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA 1065 0.1398101994494235 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 979 0.12852036174740433 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.251087303264733E-4 2 0.0 0.0 0.0 0.0 5.251087303264733E-4 3 0.0 0.0 0.0 0.0 5.251087303264733E-4 4 0.0 0.0 0.0 0.0 5.251087303264733E-4 5 0.0 0.0 0.0 0.0 5.251087303264733E-4 6 0.0 0.0 0.0 0.0 5.251087303264733E-4 7 0.0 0.0 0.0 0.0 5.251087303264733E-4 8 0.0 0.0 0.0 0.0 5.251087303264733E-4 9 0.0 0.0 0.0 0.0 5.251087303264733E-4 10 0.0 0.0 0.0 0.0 5.251087303264733E-4 11 0.0 0.0 0.0 0.0 5.251087303264733E-4 12 0.0 0.0 0.0 0.0 0.0013127718258161831 13 0.0 0.0 0.0 0.0 0.001706603373561038 14 0.0 0.0 0.0 0.0 0.001706603373561038 15 0.0 0.0 0.0 1.3127718258161832E-4 0.0019691577387242745 16 0.0 0.0 0.0 1.3127718258161832E-4 0.0019691577387242745 17 0.0 0.0 0.0 1.3127718258161832E-4 0.0019691577387242745 18 0.0 0.0 0.0 2.6255436516323664E-4 0.002100434921305893 19 0.0 0.0 0.0 3.9383154774485493E-4 0.002100434921305893 20 0.0 0.0 0.0 3.9383154774485493E-4 0.0026255436516323663 21 0.0 0.0 0.0 3.9383154774485493E-4 0.0026255436516323663 22 0.0 0.0 0.0 9.189402780713282E-4 0.0027568208342139845 23 0.0 0.0 0.0 0.001706603373561038 0.0028880980167956026 24 0.0 0.0 0.0 0.0019691577387242745 0.0030193751993772213 25 0.0 0.0 0.0 0.0024942664690507477 0.0030193751993772213 26 0.0 0.0 0.0 0.003938315477448549 0.0031506523819588394 27 0.0 0.0 0.0 0.004594701390356641 0.0031506523819588394 28 0.0 0.0 0.0 0.005119810120683114 0.0031506523819588394 29 0.0 0.0 0.0 0.007088967859407389 0.0031506523819588394 30 0.0 0.0 0.0 0.009583234328458137 0.0031506523819588394 31 0.0 0.0 0.0 0.012208777980090502 0.0031506523819588394 32 0.0 0.0 0.0 0.014965598814304487 0.0031506523819588394 33 0.0 0.0 0.0 0.018510082744008182 0.0032819295645404576 34 0.0 0.0 0.0 0.02336733849952806 0.0035444839297036944 35 0.0 0.0 0.0 0.028093317072466317 0.0035444839297036944 36 0.0 0.0 0.0 0.03452589901896561 0.0035444839297036944 37 0.0 0.0 0.0 0.04279636152160757 0.0035444839297036944 38 0.0 0.0 0.0 0.05539897104944293 0.0036757611122853126 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGTGC 45 4.0682946E-5 29.33259 9 TAGGACC 525 0.0 26.818365 4 GTAATAC 95 2.6828275E-8 23.157309 3 GTATAAT 135 5.456968E-12 22.815731 1 GTCCTAC 1020 0.0 22.000887 1 TCGTATA 60 2.870644E-4 22.000887 44 TAGATTG 50 0.0025799493 21.999443 5 ATAGGAC 150 0.0 21.999441 3 GTAGGAC 1275 0.0 21.740623 3 GTATTAA 115 8.754796E-9 21.044323 1 TCCTACA 1105 0.0 20.904446 2 TCCTATA 95 6.861119E-7 20.841578 2 TAATACC 85 6.1098835E-6 20.705357 4 TGTAGGA 1330 0.0 20.510757 2 CTGTAGG 1305 0.0 20.062109 1 GTATTAC 100 1.1218854E-6 19.800798 1 TAGGACT 200 0.0 19.799498 4 ATCACGG 635 0.0 19.401083 35 CTAGAAC 125 2.2851964E-8 19.359509 3 CGGAAAA 660 0.0 18.999517 39 >>END_MODULE