##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062044_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1550917 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.243115524557407 32.0 32.0 32.0 32.0 32.0 2 30.726626247568372 32.0 32.0 32.0 32.0 32.0 3 30.74235371718796 32.0 32.0 32.0 32.0 32.0 4 30.75341427039616 32.0 32.0 32.0 32.0 32.0 5 30.621529714356086 32.0 32.0 32.0 32.0 32.0 6 34.31345649057945 36.0 36.0 36.0 32.0 36.0 7 34.235545809350214 36.0 36.0 36.0 32.0 36.0 8 34.17825131841356 36.0 36.0 36.0 32.0 36.0 9 34.353361269494116 36.0 36.0 36.0 32.0 36.0 10 33.9585451703734 36.0 36.0 36.0 32.0 36.0 11 34.346121036780175 36.0 36.0 36.0 32.0 36.0 12 34.120869137419994 36.0 36.0 36.0 32.0 36.0 13 34.2388296730257 36.0 36.0 36.0 32.0 36.0 14 34.111023349411994 36.0 36.0 36.0 32.0 36.0 15 34.04457362966555 36.0 36.0 36.0 32.0 36.0 16 34.06681337557071 36.0 36.0 36.0 32.0 36.0 17 33.97819096702145 36.0 36.0 36.0 32.0 36.0 18 34.00629176158363 36.0 36.0 36.0 32.0 36.0 19 33.99416216341687 36.0 36.0 36.0 32.0 36.0 20 33.982235670896635 36.0 36.0 36.0 32.0 36.0 21 33.964934938491226 36.0 36.0 36.0 32.0 36.0 22 33.93773167745276 36.0 36.0 36.0 32.0 36.0 23 33.89633358845122 36.0 36.0 36.0 32.0 36.0 24 33.859544385676344 36.0 36.0 36.0 32.0 36.0 25 33.48190135255465 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 4 28.0 5 114.0 6 306.0 7 71.0 8 277.0 9 199.0 10 123.0 11 31.0 12 63.0 13 64.0 14 195.0 15 313.0 16 473.0 17 636.0 18 973.0 19 1349.0 20 2028.0 21 3114.0 22 4767.0 23 6998.0 24 10083.0 25 14034.0 26 19239.0 27 25191.0 28 32682.0 29 43611.0 30 57552.0 31 77888.0 32 110594.0 33 155563.0 34 330216.0 35 652142.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.49251175287591 17.2264824807837 11.740173589864446 25.540832176475938 2 16.9561522510626 19.114495213139108 37.48297775760327 26.446374778195025 3 19.684970829915972 22.681674687794988 27.920167850492355 29.713186631796678 4 12.969259727605758 15.370200681340265 35.0316327339955 36.628906857058475 5 15.07370962998127 36.28367500683691 33.1821043235071 15.460511039674717 6 35.22562971345546 34.6797414886019 16.34703290620155 13.747595891741094 7 31.03566239521739 29.83710487265367 19.728789972625975 19.398442759502966 8 28.390540251823616 33.131064592815015 18.680156126251322 19.798239029110047 9 26.95559441665424 14.50216156792268 18.36141725523156 40.180826760191515 10 16.66820540400248 26.561683890840467 30.47997629268463 26.290134412472423 11 37.53445496109471 21.165951363702987 21.65853866413217 19.641055011070137 12 24.789184338208948 23.426057145070743 28.301175376808178 23.483583139912128 13 29.612437432897533 19.37128495219625 24.859242177054327 26.157035437851896 14 23.67286971026355 19.544945169294806 24.61998073760015 32.16220438284149 15 25.349375498358445 27.23982864540122 21.774430459022426 25.636365397217908 16 26.054993754377588 25.688971231404345 23.38683803664744 24.86919697757063 17 24.168847073284258 26.099806135867574 24.691240866016837 25.04010592483133 18 24.84792504176252 25.186156273156573 25.765667722671044 24.200250962409857 19 25.828520238876635 24.862028928262788 24.800780163403186 24.50867066945739 20 25.97064994388523 24.397177675680524 24.55509928022082 25.077073100213422 21 26.80583360116063 24.160538907238823 24.235272402946485 24.798355088654063 22 26.178614004276657 24.151364999699872 24.78143933452997 24.8885816614935 23 24.757756440039234 24.233712766506635 25.22114242940478 25.787388364049352 24 24.87413722446846 24.928477158834596 25.097498878674156 25.099886738022786 25 25.122066436666785 24.498085270327305 25.039656265044535 25.34019202796138 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 224.0 1 224.0 2 322.5 3 421.0 4 421.0 5 421.0 6 888.0 7 1355.0 8 1355.0 9 1355.0 10 1734.0 11 2113.0 12 2113.0 13 2113.0 14 2943.5 15 3774.0 16 3774.0 17 3774.0 18 6213.5 19 8653.0 20 8653.0 21 8653.0 22 14131.5 23 19610.0 24 19610.0 25 19610.0 26 29547.0 27 39484.0 28 39484.0 29 39484.0 30 51111.5 31 62739.0 32 62739.0 33 62739.0 34 77044.0 35 91349.0 36 91349.0 37 91349.0 38 107109.5 39 122870.0 40 122870.0 41 122870.0 42 141723.0 43 160576.0 44 160576.0 45 160576.0 46 179250.5 47 197925.0 48 197925.0 49 197925.0 50 204657.5 51 211390.0 52 211390.0 53 211390.0 54 199314.5 55 187239.0 56 187239.0 57 187239.0 58 173683.0 59 160127.0 60 160127.0 61 160127.0 62 140919.5 63 121712.0 64 121712.0 65 121712.0 66 100221.5 67 78731.0 68 78731.0 69 78731.0 70 59477.0 71 40223.0 72 40223.0 73 40223.0 74 30305.5 75 20388.0 76 20388.0 77 20388.0 78 16084.0 79 11780.0 80 11780.0 81 11780.0 82 8138.0 83 4496.0 84 4496.0 85 4496.0 86 3339.0 87 2182.0 88 2182.0 89 2182.0 90 1462.0 91 742.0 92 742.0 93 742.0 94 471.5 95 201.0 96 201.0 97 201.0 98 407.0 99 613.0 100 613.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.001289559660510524 2 3.22389915127631E-4 3 8.382137793318404E-4 4 0.00967169745382893 5 0.032819293359992834 6 0.062285731602658295 7 0.1056149361958119 8 0.10690449585632242 9 0.1167051492762024 10 0.1307613495757671 11 0.13901453140303446 12 0.13230882116837975 13 0.12766640639054186 14 0.11509319970056425 15 0.13424316065914552 16 0.11812366490276398 17 0.1221212998503466 18 0.10838748946590951 19 0.09658801857223823 20 0.09117186799809403 21 0.09097843404901745 22 0.10161730124822928 23 0.0797592650025759 24 0.09104291203204298 25 0.08710975506748589 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1550917.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.51785255981237 #Duplication Level Percentage of deduplicated Percentage of total 1 73.20254944533005 36.24833050436228 2 14.818641244115504 14.675745845257323 3 5.2365697054049 7.779110597742597 4 2.351986177622095 4.658612190648302 5 1.1880901635385381 2.9415836772932344 6 0.7260536408481247 2.157157028281944 7 0.4870565503535867 1.6882596114089814 8 0.324118613390207 1.2839726167797676 9 0.23232273331203718 1.035371056899426 >10 1.2466343177287376 11.138023374347048 >50 0.09603971321099462 3.264823075555202 >100 0.0779287258122696 7.994006098543721 >500 0.008615130173608977 2.86185805598707 >1k 0.003393839159300506 2.2731462668929727 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2605 0.16796514578149574 No Hit GGGTAGGCACACGCTGAGCCAGTCA 1797 0.11586693549687056 No Hit GCGCAAGACGGACCAGAGCGAAAGC 1764 0.11373916205702819 No Hit TATCAACGCAGAGTACTTTTTTTTT 1714 0.11051526290575188 No Hit GAATAGGACCGCGGTTCTATTTTGT 1558 0.1004566975537698 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 1.2895596605105237E-4 6 0.0 0.0 0.0 0.0 1.9343394907657857E-4 7 0.0 0.0 0.0 0.0 1.9343394907657857E-4 8 0.0 0.0 0.0 0.0 1.9343394907657857E-4 9 0.0 0.0 0.0 0.0 1.9343394907657857E-4 10 0.0 0.0 0.0 0.0 2.5791193210210475E-4 11 0.0 0.0 0.0 6.447798302552619E-5 2.5791193210210475E-4 12 0.0 0.0 0.0 6.447798302552619E-5 3.8686789815315715E-4 13 0.0 0.0 0.0 6.447798302552619E-5 5.158238642042095E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTAGCC 45 3.5426427E-5 16.886793 3 GGTATCA 740 0.0 15.399516 1 TCTTATA 125 1.03682396E-10 12.916728 2 CCGACCA 290 0.0 12.77634 9 CGTTATT 135 2.7284841E-11 12.66346 2 GTATCAA 1900 0.0 12.245317 1 GTCTTAC 70 1.0947962E-4 12.209617 1 TCGCACG 165 0.0 12.091751 13 TCGGAAT 135 3.7107384E-10 11.962252 19 CGACCAT 310 0.0 11.952831 10 CGCCGGT 260 0.0 11.693123 7 CGTCGTA 245 0.0 11.63384 10 CCGTCGT 230 0.0 11.56565 9 ACGGTAT 230 0.0 11.56565 9 ACCGTCG 250 0.0 11.400058 8 ACGCCCC 175 1.8189894E-12 11.399322 17 GCGTTAT 150 1.7826096E-10 11.395642 1 CGTTCGC 60 0.0058725956 11.0841055 15 ACATCGT 95 1.3585372E-5 11.001122 6 GACCATA 340 0.0 10.899226 11 >>END_MODULE