##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062044_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1550917 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.251201708408637 32.0 32.0 32.0 32.0 32.0 2 31.454110052310988 32.0 32.0 32.0 32.0 32.0 3 31.58005296221526 32.0 32.0 32.0 32.0 32.0 4 31.634100341926743 32.0 32.0 32.0 32.0 32.0 5 31.638225643280716 32.0 32.0 32.0 32.0 32.0 6 35.25861409733725 36.0 36.0 36.0 36.0 36.0 7 35.26679312948404 36.0 36.0 36.0 36.0 36.0 8 35.20814073222487 36.0 36.0 36.0 36.0 36.0 9 35.32820389485704 36.0 36.0 36.0 36.0 36.0 10 35.193608039630746 36.0 36.0 36.0 36.0 36.0 11 35.31744380904974 36.0 36.0 36.0 36.0 36.0 12 35.23767422756988 36.0 36.0 36.0 36.0 36.0 13 35.27339503016602 36.0 36.0 36.0 36.0 36.0 14 35.2208983459463 36.0 36.0 36.0 36.0 36.0 15 35.19221789431672 36.0 36.0 36.0 36.0 36.0 16 35.229675733775565 36.0 36.0 36.0 36.0 36.0 17 35.206367587691666 36.0 36.0 36.0 36.0 36.0 18 35.19419414449645 36.0 36.0 36.0 36.0 36.0 19 35.20119709823285 36.0 36.0 36.0 36.0 36.0 20 35.196585632886865 36.0 36.0 36.0 36.0 36.0 21 35.18750197463823 36.0 36.0 36.0 36.0 36.0 22 35.17698174692779 36.0 36.0 36.0 36.0 36.0 23 35.120615738946704 36.0 36.0 36.0 36.0 36.0 24 35.124243915051544 36.0 36.0 36.0 36.0 36.0 25 35.099056235762454 36.0 36.0 36.0 36.0 36.0 26 35.06641167773646 36.0 36.0 36.0 36.0 36.0 27 35.05748405620675 36.0 36.0 36.0 36.0 36.0 28 35.0289577069566 36.0 36.0 36.0 36.0 36.0 29 34.99534017616674 36.0 36.0 36.0 36.0 36.0 30 34.99319886235047 36.0 36.0 36.0 36.0 36.0 31 34.982574825087354 36.0 36.0 36.0 36.0 36.0 32 34.92908389036938 36.0 36.0 36.0 32.0 36.0 33 34.90058720099141 36.0 36.0 36.0 32.0 36.0 34 34.882230964003874 36.0 36.0 36.0 32.0 36.0 35 34.8587164883743 36.0 36.0 36.0 32.0 36.0 36 34.836478676808625 36.0 36.0 36.0 32.0 36.0 37 34.84091863071976 36.0 36.0 36.0 32.0 36.0 38 34.827408558936426 36.0 36.0 36.0 32.0 36.0 39 34.81717074479163 36.0 36.0 36.0 32.0 36.0 40 34.82441549096438 36.0 36.0 36.0 32.0 36.0 41 34.813977795072205 36.0 36.0 36.0 32.0 36.0 42 34.77914034084351 36.0 36.0 36.0 32.0 36.0 43 34.78713496595885 36.0 36.0 36.0 32.0 36.0 44 34.73801112503119 36.0 36.0 36.0 32.0 36.0 45 34.7222791419528 36.0 36.0 36.0 32.0 36.0 46 34.69992204611852 36.0 36.0 36.0 32.0 36.0 47 34.67769326147047 36.0 36.0 36.0 32.0 36.0 48 34.639147033658155 36.0 36.0 36.0 32.0 36.0 49 34.624454435666124 36.0 36.0 36.0 32.0 36.0 50 34.22417963050247 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 11.0 20 20.0 21 36.0 22 98.0 23 291.0 24 698.0 25 1668.0 26 3649.0 27 6812.0 28 11918.0 29 18974.0 30 28542.0 31 42595.0 32 64651.0 33 110618.0 34 255191.0 35 1005144.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.190714405036566 17.748253218637753 12.100633182041289 25.9603991942844 2 16.280416364950597 19.60536505441206 37.306356316628744 26.807862264008598 3 19.004341955775754 23.144481254279732 28.199629379836665 29.65154741010785 4 12.59725697764613 15.754679328423121 35.20543007781848 36.442633616112275 5 14.636695580743522 36.64296670937258 33.00608607681778 15.714251633066114 6 35.40063175690706 34.780094047828605 16.215222904186117 13.604051291078223 7 31.092508496586213 29.902696275816176 19.72497561120292 19.27981961639469 8 28.42292656538035 33.30771408141119 18.566693124132367 19.702666229076087 9 27.126596716652145 14.255372789130561 18.3467587240323 40.271271770184995 10 16.581136401590545 26.661908179246673 30.495649981655966 26.26130543750681 11 37.811759107676295 21.050578464224714 21.604508816397008 19.53315361170198 12 24.788109228282366 23.370883161381297 28.414544427587035 23.426463182749302 13 29.721835533429577 19.249579442355717 25.043635475012525 25.98494954920218 14 23.699785352794507 19.38156587360897 24.65966908609552 32.258979687501004 15 25.31089671465333 27.13697767191926 21.81548077685653 25.736644836570882 16 26.079847109510908 25.672023078004326 23.383759512132844 24.864370300351922 17 24.344952050947924 25.977470103171218 24.681720556290244 24.99585728959061 18 24.992069202974243 25.036752474021807 25.79114536183778 24.180032961166177 19 25.92287396609488 24.80508293163524 24.83874046047626 24.433302641793624 20 26.136170201790947 24.326460817892954 24.510546052903067 25.026822927413033 21 26.998994788244634 24.185046653044616 24.069888975361028 24.746069583349723 22 26.216876854145 24.235210523838475 24.781145606115608 24.766767015900914 23 24.864515638167614 24.2168342986762 25.18464882388935 25.734001239266835 24 25.025823681960564 24.730898535175015 25.11557790240776 25.12769988045666 25 25.23079938668424 24.28322911521851 25.157874646821167 25.32809685127609 26 24.76159158171654 25.22054793637284 25.386321578943978 24.631538902966646 27 25.271630323557805 24.73981454794692 24.8694801062342 25.119075022261082 28 24.929669642367795 24.69167803107238 25.254707765516045 25.123944561043782 29 24.73949148531603 24.76612102966712 25.23952082294964 25.254866662067215 30 24.86646463343865 25.00264362628151 25.261590044490294 24.86930169578954 31 25.429457544280453 24.69131026300688 24.493555396509144 25.385676796203523 32 25.29652041872326 24.72459628410509 24.445920285252804 25.532963011918845 33 24.847186687574798 24.558259914166634 25.053452420253375 25.5411009780052 34 25.491308645445994 24.814286331435305 25.071425854128126 24.62297916899057 35 25.7608260424666 24.468683930046367 25.34158911557257 24.428900911914468 36 24.63860067211893 25.085239948520744 24.840545845165053 25.435613534195276 37 25.649819587695337 24.824552580063603 24.674574373973172 24.851053458267888 38 25.04905162558667 24.5414164652267 24.93086348270088 25.47866842648575 39 25.63295424211201 24.47511190262183 24.55596807535228 25.335965779913884 40 26.021800034173374 24.56543395350487 24.78768984760609 24.62507616471567 41 24.74121577967975 25.06347902451857 25.416949834483844 24.778355361317836 42 25.96106787683939 25.149192089772534 24.73864383020183 24.151096203186246 43 25.393926849571752 24.283381016585 25.101572741300142 25.221119392543102 44 24.819146747929995 24.96306847308206 24.796965263408353 25.42081951557959 45 25.084758002844826 25.014475596529984 24.799308266371607 25.10145813425358 46 24.976384512366778 24.819119872537623 24.71988646511775 25.48460914997785 47 25.347669095363983 24.720484879747243 24.99529305564511 24.936552969243664 48 25.859859961840602 25.14509663329385 24.09916285319851 24.89588055166704 49 25.11885379355259 25.309909694974706 24.368364547298103 25.2028719641746 50 25.247131813735702 25.39749679700663 24.28039845430987 25.0749729349478 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 126.0 1 76.0 2 26.0 3 96.0 4 166.0 5 184.0 6 202.0 7 164.5 8 127.0 9 184.5 10 242.0 11 397.0 12 552.0 13 953.0 14 1354.0 15 1866.0 16 2378.0 17 2392.5 18 2407.0 19 2436.0 20 2465.0 21 2925.0 22 3385.0 23 4278.0 24 5171.0 25 6697.5 26 8224.0 27 10940.0 28 13656.0 29 16238.5 30 18821.0 31 21327.0 32 23833.0 33 27324.0 34 30815.0 35 35846.0 36 40877.0 37 48274.5 38 55672.0 39 60847.0 40 66022.0 41 71375.5 42 76729.0 43 79619.5 44 82510.0 45 90196.0 46 97882.0 47 104724.0 48 111566.0 49 116740.0 50 121914.0 51 118985.5 52 116057.0 53 116298.5 54 116540.0 55 117215.5 56 117891.0 57 114348.0 58 110805.0 59 101944.5 60 93084.0 61 81486.0 62 69888.0 63 60505.5 64 51123.0 65 42732.5 66 34342.0 67 29718.0 68 25094.0 69 22291.0 70 19488.0 71 14954.5 72 10421.0 73 9162.5 74 7904.0 75 5797.5 76 3691.0 77 3279.5 78 2868.0 79 2465.5 80 2063.0 81 1582.5 82 1102.0 83 929.0 84 756.0 85 582.5 86 409.0 87 275.0 88 141.0 89 91.5 90 42.0 91 32.5 92 23.0 93 21.5 94 20.0 95 19.0 96 18.0 97 18.0 98 18.0 99 12.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.031852123614609935 2 0.0042555468796847285 3 1.9343394907657857E-4 4 0.0 5 0.0 6 2.5791193210210475E-4 7 0.0 8 0.0 9 0.0 10 2.5791193210210475E-4 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 1.9343394907657857E-4 17 0.0 18 6.447798302552619E-5 19 6.447798302552619E-5 20 3.22389915127631E-4 21 0.0 22 0.0 23 0.0 24 9.671697453828928E-4 25 1.9343394907657857E-4 26 4.513458811786833E-4 27 2.5791193210210475E-4 28 0.0014185156265615762 29 5.158238642042095E-4 30 0.001096125711433945 31 4.513458811786833E-4 32 7.737357963063143E-4 33 3.22389915127631E-4 34 5.158238642042095E-4 35 2.5791193210210475E-4 36 6.447798302552619E-5 37 0.0016119495756381547 38 0.0 39 9.671697453828928E-4 40 1.2895596605105237E-4 41 7.092578132807881E-4 42 0.004126590913633676 43 0.0037397230154805187 44 0.004771370743888938 45 0.001998817473791312 46 0.0018053835247147333 47 0.001096125711433945 48 0.0034818110833784144 49 0.003997634947582624 50 0.0015474715926126286 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1550917.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.78536586304373 #Duplication Level Percentage of deduplicated Percentage of total 1 72.4432826196797 36.79058612160311 2 15.4554821803582 15.69824634238488 3 5.3898104305578585 8.211704839449903 4 2.393992859900178 4.8631921305417976 5 1.2136381481671727 3.0817528690008373 6 0.7137713616147938 2.1749483845302118 7 0.4663482942085975 1.6578568118692991 8 0.32504079947065667 1.3205852737226826 9 0.23341717497366993 1.066875896678033 >10 1.1991479303688088 10.721690388794093 >50 0.08889519033530907 3.104478477252037 >100 0.06722359549270383 7.006166482292313 >500 0.007525839454745417 2.6420558264216285 >1k 0.00242357541762988 1.6598601554591488 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1771 0.11419050793820687 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1705 0.10993496105852216 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 1667 0.10748479770355215 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1613 0.10400298662017374 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 1608 0.10368059670504612 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1602 0.10329372880689294 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.447798302552619E-5 2 0.0 0.0 0.0 0.0 6.447798302552619E-5 3 0.0 0.0 0.0 0.0 6.447798302552619E-5 4 0.0 0.0 0.0 0.0 6.447798302552619E-5 5 0.0 0.0 0.0 0.0 6.447798302552619E-5 6 0.0 0.0 0.0 0.0 2.5791193210210475E-4 7 0.0 0.0 0.0 0.0 2.5791193210210475E-4 8 0.0 0.0 0.0 0.0 2.5791193210210475E-4 9 0.0 0.0 0.0 0.0 3.223899151276309E-4 10 0.0 0.0 0.0 0.0 3.223899151276309E-4 11 0.0 0.0 0.0 0.0 3.8686789815315715E-4 12 0.0 0.0 0.0 0.0 8.382137793318405E-4 13 0.0 0.0 0.0 0.0 9.671697453828928E-4 14 0.0 0.0 0.0 6.447798302552619E-5 9.671697453828928E-4 15 0.0 0.0 0.0 1.9343394907657857E-4 0.0010961257114339453 16 0.0 0.0 0.0 3.223899151276309E-4 0.0011606036944594713 17 0.0 0.0 0.0 3.8686789815315715E-4 0.0012895596605105237 18 0.0 0.0 0.0 3.8686789815315715E-4 0.0015474715926126286 19 0.0 0.0 0.0 4.513458811786833E-4 0.0015474715926126286 20 0.0 0.0 0.0 6.447798302552618E-4 0.0016119495756381547 21 0.0 0.0 0.0 0.001031647728408419 0.0018698615077402596 22 0.0 0.0 0.0 0.0012250816774849976 0.0018698615077402596 23 0.0 0.0 0.0 0.0016119495756381547 0.0019988174737913117 24 0.0 0.0 0.0 0.0018698615077402596 0.0019988174737913117 25 0.0 0.0 0.0 0.0021922514228678905 0.0019988174737913117 26 0.0 0.0 0.0 0.0029015092361486783 0.002063295456816838 27 0.0 0.0 0.0 0.003481811083378414 0.002256729405893417 28 0.0 0.0 0.0 0.004320024862710254 0.002256729405893417 29 0.0 0.0 0.0 0.0054161505741442 0.002256729405893417 30 0.0 0.0 0.0 0.006641232251629197 0.002256729405893417 31 0.0 0.0 0.0 0.009607219470803402 0.0023212073889189427 32 0.0 0.0 0.0 0.012379772740901029 0.0024501633549699952 33 0.0 0.0 0.0 0.01521680399402418 0.0024501633549699952 34 0.0 0.0 0.0 0.019149960958581277 0.0024501633549699952 35 0.0 0.0 0.0 0.022373860109857587 0.0024501633549699952 36 0.0 0.0 0.0 0.028370312531231522 0.0024501633549699952 37 0.0 0.0 0.0 0.03597871452824361 0.0024501633549699952 38 0.0 0.0 0.0 0.04642414777837885 0.0025146413379955215 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 870 0.0 27.822107 1 GTATCAA 2000 0.0 26.625753 1 GGTATCG 45 0.0013974193 24.447363 44 ATCGATT 60 2.87347E-4 21.99979 29 CGGATCG 65 4.9333466E-4 20.307499 26 CTATAAG 215 0.0 19.446064 1 CGACACG 60 0.0074134306 18.333158 25 ACGGTAT 360 0.0 18.332567 9 TCAACGC 2970 0.0 17.851107 4 TAGGACG 310 0.0 17.741194 4 CGACGGT 375 0.0 17.599266 7 GACGGTA 375 0.0 17.599266 8 TACGACG 390 0.0 17.48645 5 CAACGCA 3035 0.0 17.468794 5 ATCAACG 3030 0.0 17.425014 3 TATAAGG 240 0.0 17.4165 2 AACGCAG 3055 0.0 17.282421 6 GTCCTAC 535 0.0 17.274761 1 GTCCTAA 260 0.0 16.926735 1 CGTCTTA 170 2.4701876E-9 16.822828 15 >>END_MODULE