##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4062042_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1435742 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.295831702353208 32.0 32.0 32.0 32.0 32.0 2 31.475340973517525 32.0 32.0 32.0 32.0 32.0 3 31.59218787219431 32.0 32.0 32.0 32.0 32.0 4 31.66064585419943 32.0 32.0 32.0 32.0 32.0 5 31.63816200960897 32.0 32.0 32.0 32.0 32.0 6 35.28974774019287 36.0 36.0 36.0 36.0 36.0 7 35.2961472186507 36.0 36.0 36.0 36.0 36.0 8 35.24574679851951 36.0 36.0 36.0 36.0 36.0 9 35.32050814143488 36.0 36.0 36.0 36.0 36.0 10 35.21108318904093 36.0 36.0 36.0 36.0 36.0 11 35.32478746181417 36.0 36.0 36.0 36.0 36.0 12 35.249180563081666 36.0 36.0 36.0 36.0 36.0 13 35.28527757772636 36.0 36.0 36.0 36.0 36.0 14 35.253257200806274 36.0 36.0 36.0 36.0 36.0 15 35.22792953051454 36.0 36.0 36.0 36.0 36.0 16 35.23175403380273 36.0 36.0 36.0 36.0 36.0 17 35.2188109005657 36.0 36.0 36.0 36.0 36.0 18 35.212226848556355 36.0 36.0 36.0 36.0 36.0 19 35.20375805680965 36.0 36.0 36.0 36.0 36.0 20 35.20717371226864 36.0 36.0 36.0 36.0 36.0 21 35.19539652667401 36.0 36.0 36.0 36.0 36.0 22 35.17782024904196 36.0 36.0 36.0 36.0 36.0 23 35.14656672299062 36.0 36.0 36.0 36.0 36.0 24 35.133991343848685 36.0 36.0 36.0 36.0 36.0 25 35.11801075680728 36.0 36.0 36.0 36.0 36.0 26 35.08055973844883 36.0 36.0 36.0 36.0 36.0 27 35.070249390210776 36.0 36.0 36.0 36.0 36.0 28 35.045357731402994 36.0 36.0 36.0 36.0 36.0 29 35.02404192396684 36.0 36.0 36.0 36.0 36.0 30 35.005980183069106 36.0 36.0 36.0 36.0 36.0 31 35.01168037154308 36.0 36.0 36.0 36.0 36.0 32 34.99493154062499 36.0 36.0 36.0 36.0 36.0 33 34.97412418108546 36.0 36.0 36.0 36.0 36.0 34 34.95563269723947 36.0 36.0 36.0 36.0 36.0 35 34.94790219969883 36.0 36.0 36.0 36.0 36.0 36 34.921923994701 36.0 36.0 36.0 36.0 36.0 37 34.91883848212283 36.0 36.0 36.0 36.0 36.0 38 34.89559126918346 36.0 36.0 36.0 32.0 36.0 39 34.88262445481152 36.0 36.0 36.0 32.0 36.0 40 34.868259060471864 36.0 36.0 36.0 32.0 36.0 41 34.84352132904101 36.0 36.0 36.0 32.0 36.0 42 34.820614010038014 36.0 36.0 36.0 32.0 36.0 43 34.81261257245382 36.0 36.0 36.0 32.0 36.0 44 34.76559437559116 36.0 36.0 36.0 32.0 36.0 45 34.75440364633757 36.0 36.0 36.0 32.0 36.0 46 34.738369428490635 36.0 36.0 36.0 32.0 36.0 47 34.707990711423086 36.0 36.0 36.0 32.0 36.0 48 34.683363027619166 36.0 36.0 36.0 32.0 36.0 49 34.67533024735642 36.0 36.0 36.0 32.0 36.0 50 34.26565148891653 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 2.0 19 1.0 20 13.0 21 31.0 22 112.0 23 302.0 24 696.0 25 1630.0 26 3417.0 27 6254.0 28 10703.0 29 16958.0 30 25394.0 31 37737.0 32 57424.0 33 97885.0 34 227457.0 35 949726.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.86162316118325 17.897049950602593 12.253204561004056 25.9881223272101 2 16.340686008185738 19.51837054249311 37.04735356642344 27.093589882897717 3 18.791855622783807 22.74104137311865 28.2431556153312 30.22394738876634 4 12.900098276778332 15.6646637520277 34.62316671321638 36.812071257977586 5 15.058008373376536 36.135138580008515 32.814135697176575 15.992717349438374 6 35.71937517891483 34.28944954479888 16.07903664941887 13.912138626867417 7 31.449452617531566 29.72706795510614 19.618079014196145 19.205400413166153 8 28.64881016227149 32.98392050939514 18.483822302335657 19.883447025997707 9 27.02212514504695 14.550455443944665 18.47992188011495 39.947497530893436 10 17.07333211677307 26.216130753296902 30.233008437449065 26.477528692480963 11 37.47811236280613 21.129005071941894 21.582568455892492 19.81031410935948 12 24.844853741131764 23.278416317137758 27.976474881977403 23.900255059753075 13 29.579478764290517 19.145918974300397 24.970920959336706 26.30368130207238 14 23.82670424073406 19.226713434586436 24.56792376346168 32.37865856121782 15 25.37370920402133 26.988692954583758 21.653890462213962 25.983707379180938 16 26.213633482618597 25.658515180430864 23.15644306380726 24.97140827314328 17 24.50983533253189 25.994085288303886 24.500432528964115 24.995646850200107 18 25.253057832934818 24.761255353514812 25.62276291164341 24.362923901906964 19 25.894694172072697 24.85850521890423 24.87953963873732 24.36726097028575 20 26.128150389869997 24.11015960466242 24.56379485072106 25.197895154746526 21 26.904833876838595 23.96433342480752 24.316276879829385 24.814555818524497 22 26.435808104798774 23.871419795478573 24.712169735230983 24.98060236449167 23 24.796812238419047 24.048348553116476 25.3221855473933 25.83265366107118 24 25.086141148200387 24.535757195841825 25.081753121245363 25.296348534712426 25 25.290738776337484 24.13725614474497 25.07816532113427 25.493839757783277 26 24.990597157137522 25.07062579750038 25.267040737294323 24.67173630806778 27 25.598333400662238 24.48831193435014 24.730765641084933 25.18258902390269 28 25.11283474307111 24.420433396855117 25.168625254922937 25.29810660515084 29 24.937505789725527 24.723399127832263 25.18636821748891 25.1527268649533 30 24.953246617562556 24.779397168677846 25.37428825158021 24.893067962179387 31 25.58948941795625 24.381326903172873 24.556916531892398 25.472267146978478 32 25.448969584852883 24.49419529550083 24.378853435042195 25.67798168460409 33 24.907016590747627 24.259336648696838 25.027302993578225 25.806343766977307 34 25.691927827906962 24.4262346463658 25.00795759663169 24.873879929095548 35 25.97507344654805 24.191182513801266 25.15236066747554 24.681383372175148 36 24.762091160022816 24.87060670497911 24.881332888498537 25.48596924649954 37 25.90860334884239 24.509235784136184 24.731493605995595 24.850667261025826 38 25.089326633893833 24.360713832986708 25.089396284290633 25.460563248828826 39 25.851587694065042 24.176899556323264 24.574536995117466 25.39697575449423 40 25.76363006976885 24.453992746602626 24.92301884532099 24.859358338307537 41 24.8594964648621 24.975744029688055 25.229552373741843 24.935207131708005 42 26.009383719747742 24.808975271613832 24.743222366018006 24.438418642620423 43 25.564033893228665 24.094979051811507 24.914936075810502 25.426050979149327 44 25.027634969049533 24.696154647167443 24.706741957301098 25.56946842648193 45 25.225392765700178 24.855333506069446 24.769453011598394 25.149820716631982 46 25.10803002273436 24.63774071680114 24.822736036196673 25.43149322426782 47 25.275799887583556 24.565431037665082 25.143463304110163 25.0153057706412 48 25.866503956653386 25.06535217036073 24.080246126756393 24.987897746229496 49 25.2622963951006 25.1746030640426 24.23637497083274 25.326725570024067 50 25.32673410766972 25.26070470368957 24.35266109642243 25.059900092218278 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 197.0 1 118.5 2 40.0 3 115.0 4 190.0 5 203.0 6 216.0 7 168.0 8 120.0 9 202.0 10 284.0 11 436.0 12 588.0 13 1109.0 14 1630.0 15 2102.0 16 2574.0 17 2557.5 18 2541.0 19 2406.0 20 2271.0 21 2778.0 22 3285.0 23 4043.5 24 4802.0 25 6036.0 26 7270.0 27 9214.0 28 11158.0 29 13128.5 30 15099.0 31 17674.0 32 20249.0 33 23335.5 34 26422.0 35 30927.0 36 35432.0 37 41555.5 38 47679.0 39 53039.5 40 58400.0 41 64091.0 42 69782.0 43 73499.5 44 77217.0 45 85020.0 46 92823.0 47 98938.5 48 105054.0 49 109136.5 50 113219.0 51 111136.5 52 109054.0 53 109153.5 54 109253.0 55 109691.5 56 110130.0 57 106613.5 58 103097.0 59 94747.5 60 86398.0 61 76038.0 62 65678.0 63 56961.0 64 48244.0 65 40541.0 66 32838.0 67 28662.5 68 24487.0 69 21650.5 70 18814.0 71 14591.0 72 10368.0 73 9073.0 74 7778.0 75 5714.5 76 3651.0 77 3221.5 78 2792.0 79 2389.0 80 1986.0 81 1549.5 82 1113.0 83 968.0 84 823.0 85 623.0 86 423.0 87 286.0 88 149.0 89 100.5 90 52.0 91 36.5 92 21.0 93 16.5 94 12.0 95 14.0 96 16.0 97 13.5 98 11.0 99 11.5 100 12.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.030924776178449888 2 0.005154129363074982 3 2.089511903949317E-4 4 6.965039679831056E-5 5 6.965039679831056E-5 6 2.089511903949317E-4 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 8.358047615797268E-4 17 0.0 18 2.089511903949317E-4 19 0.0 20 4.875527775881739E-4 21 0.0 22 0.0 23 6.965039679831056E-5 24 0.0011840567455712796 25 2.089511903949317E-4 26 4.179023807898634E-4 27 2.7860158719324223E-4 28 9.751055551763478E-4 29 6.26853571184795E-4 30 0.0011840567455712796 31 5.572031743864845E-4 32 6.965039679831056E-4 33 1.3930079359662111E-4 34 4.875527775881739E-4 35 2.7860158719324223E-4 36 2.089511903949317E-4 37 0.0015323087295628323 38 0.0 39 8.358047615797268E-4 40 6.965039679831056E-5 41 9.054551583780374E-4 42 0.004457625395091876 43 0.003970072617503702 44 0.004248674204696944 45 0.0018109103167560747 46 0.0020895119039493165 47 6.26853571184795E-4 48 0.0041093734111003226 49 0.003970072617503702 50 0.00125370714236959 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1435742.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.69323433010561 #Duplication Level Percentage of deduplicated Percentage of total 1 77.86935864152785 44.14665796599173 2 13.37932848976973 15.170348104999462 3 3.8923802416573894 6.6201487542646635 4 1.5728073703116543 3.5667014720478325 5 0.8335624120804228 2.362867457842173 6 0.5355144024702863 1.8216026103836653 7 0.34878227240798265 1.3841516569868741 8 0.2492044146678725 1.1302563421490002 9 0.2062565613503999 1.0524016408284023 >10 0.9804819139122343 9.895424898673493 >50 0.07040713239383402 2.7963018830338644 >100 0.05400676808081334 6.393284735514154 >500 0.006302786685138702 2.473602337670131 >1k 0.0016065926844471203 1.1862501396145868 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 1687 0.11750021939874991 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1513 0.10538105035584387 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1442 0.10043587218316383 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.965039679831056E-5 2 0.0 0.0 0.0 0.0 6.965039679831056E-5 3 0.0 0.0 0.0 0.0 6.965039679831056E-5 4 0.0 0.0 0.0 0.0 6.965039679831056E-5 5 0.0 0.0 0.0 0.0 6.965039679831056E-5 6 0.0 0.0 0.0 0.0 6.965039679831056E-5 7 0.0 0.0 0.0 0.0 6.965039679831056E-5 8 0.0 0.0 0.0 0.0 6.965039679831056E-5 9 0.0 0.0 0.0 0.0 6.965039679831056E-5 10 0.0 0.0 0.0 0.0 6.965039679831056E-5 11 0.0 0.0 0.0 0.0 6.965039679831056E-5 12 0.0 0.0 0.0 0.0 2.0895119039493167E-4 13 0.0 0.0 0.0 0.0 2.0895119039493167E-4 14 0.0 0.0 0.0 0.0 2.0895119039493167E-4 15 0.0 0.0 0.0 0.0 4.1790238078986334E-4 16 2.7860158719324223E-4 0.0 0.0 1.3930079359662111E-4 4.875527775881739E-4 17 2.7860158719324223E-4 0.0 0.0 2.0895119039493167E-4 4.875527775881739E-4 18 2.7860158719324223E-4 0.0 0.0 4.1790238078986334E-4 4.875527775881739E-4 19 2.7860158719324223E-4 0.0 0.0 4.875527775881739E-4 4.875527775881739E-4 20 2.7860158719324223E-4 0.0 0.0 4.875527775881739E-4 4.875527775881739E-4 21 2.7860158719324223E-4 0.0 0.0 5.572031743864845E-4 5.572031743864845E-4 22 2.7860158719324223E-4 0.0 0.0 8.358047615797267E-4 6.965039679831056E-4 23 2.7860158719324223E-4 0.0 0.0 0.00125370714236959 6.965039679831056E-4 24 2.7860158719324223E-4 0.0 0.0 0.0014626583327645218 6.965039679831056E-4 25 2.7860158719324223E-4 0.0 0.0 0.0019502111103526956 6.965039679831056E-4 26 2.7860158719324223E-4 0.0 0.0 0.002228812697545938 6.965039679831056E-4 27 2.7860158719324223E-4 0.0 0.0 0.00250741428473918 7.661543647814161E-4 28 2.7860158719324223E-4 0.0 0.0 0.002994967062327354 7.661543647814161E-4 29 2.7860158719324223E-4 0.0 0.0 0.004109373411100323 7.661543647814161E-4 30 2.7860158719324223E-4 0.0 0.0 0.006338186108646261 7.661543647814161E-4 31 2.7860158719324223E-4 0.0 0.0 0.011979868249309416 7.661543647814161E-4 32 2.7860158719324223E-4 0.0 0.0 0.01748224959637595 7.661543647814161E-4 33 2.7860158719324223E-4 0.0 0.0 0.02228812697545938 7.661543647814161E-4 34 2.7860158719324223E-4 0.0 0.0 0.029044215464895502 9.054551583780372E-4 35 2.7860158719324223E-4 0.0 0.0 0.0362878567319198 9.054551583780372E-4 36 2.7860158719324223E-4 0.0 0.0 0.0468050666484647 9.054551583780372E-4 37 2.7860158719324223E-4 0.0 0.0 0.06101374759532005 9.054551583780372E-4 38 2.7860158719324223E-4 0.0 0.0 0.08128201306362842 9.054551583780372E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1825 0.0 25.56203 1 GGTATCA 840 0.0 24.362734 1 ATACCGT 485 0.0 19.957783 6 TATACAA 190 0.0 19.683245 5 GTATAGG 185 1.8189894E-12 19.031395 1 ACCGTCG 490 0.0 18.856218 8 TACCGTC 515 0.0 18.36803 7 TCTATAC 120 3.1646232E-7 18.332434 3 TAGCCCG 75 0.0012914554 17.599136 5 GGCGTTA 415 0.0 17.496162 42 GTAGGAC 390 0.0 17.48632 3 CGTCGTA 530 0.0 17.433105 10 ACGACGG 470 0.0 17.3183 6 CGTATAT 305 0.0 17.310625 10 CGACGGT 445 0.0 17.302523 7 GTAATAC 140 8.379902E-8 17.284866 3 TAGCGTA 285 0.0 16.981623 7 TACGACG 480 0.0 16.9575 5 TCAACGC 2735 0.0 16.73044 4 GACGGTA 465 0.0 16.558329 8 >>END_MODULE